RNA–Protein interactions for RNA: ENST00000639629.1

CCDC7-215, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CCDC7, Length 4,158 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-215ENST00000639629 CNNM3Q8NE01 707 aa-0.33□□□□□ -2.46
CCDC7-215ENST00000639629 OR10G2Q8NGC3 310 aa-0.33□□□□□ -2.46
CCDC7-215ENST00000639629 ITFG2Q969R8 447 aa-0.33□□□□□ -2.46
CCDC7-215ENST00000639629 AURKBQ96GD4 344 aaPredicted RBP-0.33□□□□□ -2.46
CCDC7-215ENST00000639629 FCRL1Q96LA6 429 aa-0.33□□□□□ -2.46
CCDC7-215ENST00000639629 DUSP16Q9BY84 665 aa-0.33□□□□□ -2.46
CCDC7-215ENST00000639629 LSG1Q9H089 658 aaKnown RBP-0.33□□□□□ -2.46
CCDC7-215ENST00000639629 YAE1D1Q9NRH1 226 aa-0.33□□□□□ -2.46
CCDC7-215ENST00000639629 PNO1Q9NRX1 252 aaKnown RBP-0.33□□□□□ -2.46
CCDC7-215ENST00000639629 SMOXQ9NWM0 555 aa-0.33□□□□□ -2.46
CCDC7-215ENST00000639629 ATXN10Q9UBB4 475 aa-0.33□□□□□ -2.46
CCDC7-215ENST00000639629 PCDHGB4Q9UN71 923 aa-0.33□□□□□ -2.46
CCDC7-215ENST00000639629 NPIPA1Q9UND3 350 aa-0.33□□□□□ -2.46
CCDC7-215ENST00000639629 SNAPC4Q5SXM2 1469 aa-0.33□□□□□ -2.46
CCDC7-215ENST00000639629 DOCK8Q8NF50 2099 aa-0.33□□□□□ -2.46
CCDC7-215ENST00000639629 IGHV5-51A0A0C4DH38 117 aa-0.33□□□□□ -2.46
CCDC7-215ENST00000639629 A0A1B0GU33 70 aa-0.33□□□□□ -2.46
CCDC7-215ENST00000639629 A0A1W2PPV9 198 aa-0.33□□□□□ -2.46
CCDC7-215ENST00000639629 K7EM74 188 aa-0.33□□□□□ -2.46
CCDC7-215ENST00000639629 ANGPT2O15123 496 aa-0.33□□□□□ -2.46
CCDC7-215ENST00000639629 CHADO15335 359 aa-0.33□□□□□ -2.46
CCDC7-215ENST00000639629 RRP8O43159 456 aaKnown RBP-0.33□□□□□ -2.46
CCDC7-215ENST00000639629 MOSP00540 346 aa-0.33□□□□□ -2.46
CCDC7-215ENST00000639629 IGLV6-57P01721 117 aa-0.33□□□□□ -2.46
CCDC7-215ENST00000639629 AK4P27144 223 aaPredicted RBP-0.33□□□□□ -2.46
CCDC7-215ENST00000639629 GCAP28676 217 aa-0.33□□□□□ -2.46
CCDC7-215ENST00000639629 GDI1P31150 447 aa-0.33□□□□□ -2.46
CCDC7-215ENST00000639629 MAP3K8P41279 467 aa-0.33□□□□□ -2.46
CCDC7-215ENST00000639629 ACTA2P62736 377 aa-0.33□□□□□ -2.46
CCDC7-215ENST00000639629 ACTC1P68032 377 aa-0.33□□□□□ -2.46
CCDC7-215ENST00000639629 SYCNQ0VAF6 134 aa-0.33□□□□□ -2.46
CCDC7-215ENST00000639629 BAMBIQ13145 260 aa-0.33□□□□□ -2.46
CCDC7-215ENST00000639629 PARP6Q2NL67 630 aa-0.33□□□□□ -2.46
CCDC7-215ENST00000639629 HFEQ30201 348 aa-0.33□□□□□ -2.46
CCDC7-215ENST00000639629 IL23RQ5VWK5 629 aa-0.33□□□□□ -2.46
CCDC7-215ENST00000639629 LRRC8BQ6P9F7 803 aa-0.33□□□□□ -2.46
CCDC7-215ENST00000639629 SPINK6Q6UWN8 80 aa-0.33□□□□□ -2.46
CCDC7-215ENST00000639629 CLEC18BQ6UXF7 455 aa-0.33□□□□□ -2.46
CCDC7-215ENST00000639629 GET4Q7L5D6 327 aaPredicted RBP-0.33□□□□□ -2.46
CCDC7-215ENST00000639629 CFAP206Q8IYR0 622 aa-0.33□□□□□ -2.46
CCDC7-215ENST00000639629 ANKRD20A12PQ8NF67 263 aa-0.33□□□□□ -2.46
CCDC7-215ENST00000639629 HGDQ93099 445 aa-0.33□□□□□ -2.46
CCDC7-215ENST00000639629 NEIL2Q969S2 332 aa-0.33□□□□□ -2.46
CCDC7-215ENST00000639629 TMEM159Q96B96 161 aa-0.33□□□□□ -2.46
CCDC7-215ENST00000639629 VPS39Q96JC1 886 aa-0.33□□□□□ -2.46
CCDC7-215ENST00000639629 INTS14Q96SY0 518 aa-0.33□□□□□ -2.46
CCDC7-215ENST00000639629 ZNF717Q9BY31 904 aaPredicted RBP-0.33□□□□□ -2.46
CCDC7-215ENST00000639629 FUT8Q9BYC5 575 aa-0.33□□□□□ -2.46
CCDC7-215ENST00000639629 SUDS3Q9H7L9 328 aaPredicted RBP-0.33□□□□□ -2.46
CCDC7-215ENST00000639629 VPS37BQ9H9H4 285 aa-0.33□□□□□ -2.46
CCDC7-215ENST00000639629 CNOT2Q9NZN8 540 aaKnown RBP-0.33□□□□□ -2.46
CCDC7-215ENST00000639629 ZNF225Q9UK10 706 aa-0.33□□□□□ -2.46
CCDC7-215ENST00000639629 PPIEQ9UNP9 301 aaKnown RBP-0.33□□□□□ -2.46
CCDC7-215ENST00000639629 MYO9BQ13459 2157 aa-0.33□□□□□ -2.46
CCDC7-215ENST00000639629 LAMA1P25391 3075 aa-0.33□□□□□ -2.46
CCDC7-215ENST00000639629 ARFGEF3Q5TH69 2177 aa-0.33□□□□□ -2.46
CCDC7-215ENST00000639629 NIPBLQ6KC79 2804 aaeCLIP-0.33□□□□□ -2.46
CCDC7-215ENST00000639629 GRIN2BQ13224 1484 aa-0.34□□□□□ -2.46
CCDC7-215ENST00000639629 SHROOM2Q13796 1616 aa-0.34□□□□□ -2.46
CCDC7-215ENST00000639629 BIVM-ERCC5R4GMW8 1640 aa-0.34□□□□□ -2.46
CCDC7-215ENST00000639629 DMDP11532 3685 aa-0.34□□□□□ -2.46
CCDC7-215ENST00000639629 IGKV1-9A0A0C4DH69 117 aa-0.34□□□□□ -2.46
CCDC7-215ENST00000639629 MACROD2A1Z1Q3 448 aa-0.34□□□□□ -2.46
CCDC7-215ENST00000639629 GOLGA6L4A6NEF3 574 aa-0.34□□□□□ -2.46
CCDC7-215ENST00000639629 SAGE2PA6NJ88 616 aa-0.34□□□□□ -2.46
CCDC7-215ENST00000639629 B4GALT5O43286 388 aa-0.34□□□□□ -2.46
CCDC7-215ENST00000639629 INSP01308 110 aa-0.34□□□□□ -2.46
CCDC7-215ENST00000639629 VIMP08670 466 aaKnown RBP-0.34□□□□□ -2.46
CCDC7-215ENST00000639629 RHOXF2BP0C7M4 288 aa-0.34□□□□□ -2.46
CCDC7-215ENST00000639629 TSPY3P0CV98 308 aa-0.34□□□□□ -2.46
CCDC7-215ENST00000639629 TSPY8P0CW00 308 aa-0.34□□□□□ -2.46
CCDC7-215ENST00000639629 LBPP18428 481 aa-0.34□□□□□ -2.46
CCDC7-215ENST00000639629 ACVR1BP36896 505 aa-0.34□□□□□ -2.46
CCDC7-215ENST00000639629 PPARGP37231 505 aaPredicted RBP-0.34□□□□□ -2.46
CCDC7-215ENST00000639629 YAP1P46937 504 aaKnown RBP-0.34□□□□□ -2.46
CCDC7-215ENST00000639629 FMODQ06828 376 aa-0.34□□□□□ -2.46
CCDC7-215ENST00000639629 KLRB1Q12918 225 aa-0.34□□□□□ -2.46
CCDC7-215ENST00000639629 IL15RAQ13261 267 aa-0.34□□□□□ -2.46
CCDC7-215ENST00000639629 GGTLC2Q14390 218 aa-0.34□□□□□ -2.46
CCDC7-215ENST00000639629 DUSP7Q16829 419 aa-0.34□□□□□ -2.46
CCDC7-215ENST00000639629 ZNF684Q5T5D7 378 aa-0.34□□□□□ -2.46
CCDC7-215ENST00000639629 ZNF470Q6ECI4 717 aa-0.34□□□□□ -2.46
CCDC7-215ENST00000639629 THNSL1Q8IYQ7 743 aa-0.34□□□□□ -2.46
CCDC7-215ENST00000639629 SFRP1Q8N474 314 aa-0.34□□□□□ -2.46
CCDC7-215ENST00000639629 DCAF4L2Q8NA75 395 aa-0.34□□□□□ -2.46
CCDC7-215ENST00000639629 TMEM37Q8WXS4 190 aa-0.34□□□□□ -2.46
CCDC7-215ENST00000639629 MRPL24Q96A35 216 aaKnown RBP-0.34□□□□□ -2.46
CCDC7-215ENST00000639629 C7orf34Q96L11 122 aa-0.34□□□□□ -2.46
CCDC7-215ENST00000639629 TSPAN18Q96SJ8 248 aa-0.34□□□□□ -2.46
CCDC7-215ENST00000639629 MRPL57Q9BQC6 102 aaKnown RBP-0.34□□□□□ -2.46
CCDC7-215ENST00000639629 KATNB1Q9BVA0 655 aa-0.34□□□□□ -2.46
CCDC7-215ENST00000639629 RHBGQ9H310 441 aa-0.34□□□□□ -2.46
CCDC7-215ENST00000639629 DPEP2Q9H4A9 486 aa-0.34□□□□□ -2.46
CCDC7-215ENST00000639629 RPF1Q9H9Y2 349 aaKnown RBP-0.34□□□□□ -2.46
CCDC7-215ENST00000639629 MID1IP1Q9NPA3 183 aa-0.34□□□□□ -2.46
CCDC7-215ENST00000639629 POLDIP2Q9Y2S7 368 aa-0.34□□□□□ -2.46
CCDC7-215ENST00000639629 TMEM14AQ9Y6G1 99 aa-0.34□□□□□ -2.46
CCDC7-215ENST00000639629 MED13LQ71F56 2210 aa-0.34□□□□□ -2.46
CCDC7-215ENST00000639629 RPAP1Q9BWH6 1393 aaPredicted RBP-0.34□□□□□ -2.46
CCDC7-215ENST00000639629 TNRC6AQ8NDV7 1962 aaKnown RBP-0.34□□□□□ -2.46
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms