RNA–Protein interactions for RNA: ENST00000629427.2

SHPRH-211, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SHPRH, Length 7,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-211ENST00000629427 PEA15Q15121 130 aa10.91□□□□□ -0.66
SHPRH-211ENST00000629427 DUSP7Q16829 419 aa10.91□□□□□ -0.66
SHPRH-211ENST00000629427 FAM111BQ6SJ93 734 aa10.91□□□□□ -0.66
SHPRH-211ENST00000629427 TMEM64Q6YI46 380 aa10.91□□□□□ -0.66
SHPRH-211ENST00000629427 BEST4Q8NFU0 473 aa10.91□□□□□ -0.66
SHPRH-211ENST00000629427 THOC3Q96J01 351 aaKnown RBP10.91□□□□□ -0.66
SHPRH-211ENST00000629427 LCORQ96JN0 433 aaPredicted RBP10.91□□□□□ -0.66
SHPRH-211ENST00000629427 C3orf30Q96M34 536 aa10.91□□□□□ -0.66
SHPRH-211ENST00000629427 TOX2Q96NM4 488 aa10.91□□□□□ -0.66
SHPRH-211ENST00000629427 TMEM72A0PK05 275 aa10.91□□□□□ -0.66
SHPRH-211ENST00000629427 TMEM212A6NML5 194 aa10.91□□□□□ -0.66
SHPRH-211ENST00000629427 ACP2P11117 423 aa10.91□□□□□ -0.66
SHPRH-211ENST00000629427 OPRD1P41143 372 aa10.91□□□□□ -0.66
SHPRH-211ENST00000629427 CYB561P49447 251 aa10.91□□□□□ -0.66
SHPRH-211ENST00000629427 CATR1Q13166 79 aa10.91□□□□□ -0.66
SHPRH-211ENST00000629427 C18orf63Q68DL7 685 aa10.91□□□□□ -0.66
SHPRH-211ENST00000629427 MED25Q71SY5 747 aa10.91□□□□□ -0.66
SHPRH-211ENST00000629427 HRASLS5Q96KN8 279 aa10.91□□□□□ -0.66
SHPRH-211ENST00000629427 NOX3Q9HBY0 568 aa10.91□□□□□ -0.66
SHPRH-211ENST00000629427 BIN3Q9NQY0 253 aa10.91□□□□□ -0.66
SHPRH-211ENST00000629427 TRBV4-1A0A0J9YWV2 114 aa10.9□□□□□ -0.66
SHPRH-211ENST00000629427 B4GAT1O43505 415 aa10.9□□□□□ -0.66
SHPRH-211ENST00000629427 ELF4Q99607 663 aaPredicted RBP10.9□□□□□ -0.66
SHPRH-211ENST00000629427 LIN7BQ9HAP6 207 aa10.9□□□□□ -0.66
SHPRH-211ENST00000629427 FGF21Q9NSA1 209 aa10.9□□□□□ -0.66
SHPRH-211ENST00000629427 SLX4Q8IY92 1834 aa10.9□□□□□ -0.66
SHPRH-211ENST00000629427 PRKACBP22694 351 aa10.9□□□□□ -0.66
SHPRH-211ENST00000629427 OMGP23515 440 aa10.9□□□□□ -0.66
SHPRH-211ENST00000629427 NFYBP25208 207 aa10.9□□□□□ -0.66
SHPRH-211ENST00000629427 EDDM3AQ14507 147 aa10.9□□□□□ -0.66
SHPRH-211ENST00000629427 PAPD4Q6PIY7 484 aaKnown RBP10.9□□□□□ -0.66
SHPRH-211ENST00000629427 GDPGP1Q6ZNW5 385 aa10.9□□□□□ -0.66
SHPRH-211ENST00000629427 MS4A4AQ96JQ5 239 aa10.9□□□□□ -0.66
SHPRH-211ENST00000629427 EGLN2Q96KS0 407 aa10.9□□□□□ -0.66
SHPRH-211ENST00000629427 TMEM59Q9BXS4 323 aa10.9□□□□□ -0.66
SHPRH-211ENST00000629427 MCOLN1Q9GZU1 580 aa10.9□□□□□ -0.66
SHPRH-211ENST00000629427 ACSS1Q9NUB1 689 aaPredicted RBP10.9□□□□□ -0.66
SHPRH-211ENST00000629427 BABAM2Q9NXR7 383 aa10.9□□□□□ -0.66
SHPRH-211ENST00000629427 B3GAT1Q9P2W7 334 aa10.9□□□□□ -0.66
SHPRH-211ENST00000629427 NXT1Q9UKK6 140 aaKnown RBP10.9□□□□□ -0.66
SHPRH-211ENST00000629427 A8MVM7 634 aa10.9□□□□□ -0.66
SHPRH-211ENST00000629427 TNFRSF10AO00220 468 aa10.9□□□□□ -0.66
SHPRH-211ENST00000629427 GABRPO00591 440 aa10.9□□□□□ -0.66
SHPRH-211ENST00000629427 FZD7O75084 574 aa10.9□□□□□ -0.66
SHPRH-211ENST00000629427 OR8G3PP0DMU2 310 aa10.9□□□□□ -0.66
SHPRH-211ENST00000629427 ITGAMP11215 1152 aa10.9□□□□□ -0.66
SHPRH-211ENST00000629427 F2RP25116 425 aa10.9□□□□□ -0.66
SHPRH-211ENST00000629427 GLB1L2Q8IW92 636 aa10.9□□□□□ -0.66
SHPRH-211ENST00000629427 OR5D18Q8NGL1 313 aa10.9□□□□□ -0.66
SHPRH-211ENST00000629427 IFI44Q8TCB0 444 aa10.9□□□□□ -0.66
SHPRH-211ENST00000629427 KHSRPQ92945 711 aaKnown RBP eCLIP10.9□□□□□ -0.664e-6■■□□□ 13.7
SHPRH-211ENST00000629427 RAB3CQ96E17 227 aa10.9□□□□□ -0.66
SHPRH-211ENST00000629427 SERINC4A6NH21 518 aa10.9□□□□□ -0.66
SHPRH-211ENST00000629427 BOLA2-SMG1P6H3BVE0 249 aa10.9□□□□□ -0.66
SHPRH-211ENST00000629427 KCNK2O95069 426 aa10.9□□□□□ -0.66
SHPRH-211ENST00000629427 P2RX1P51575 399 aa10.9□□□□□ -0.66
SHPRH-211ENST00000629427 SSTP61278 116 aa10.9□□□□□ -0.66
SHPRH-211ENST00000629427 LRRC28Q86X40 367 aaPredicted RBP10.9□□□□□ -0.66
SHPRH-211ENST00000629427 BTBD17A6NE02 478 aa10.9□□□□□ -0.66
SHPRH-211ENST00000629427 SCAF4O95104 1147 aaKnown RBP10.9□□□□□ -0.66
SHPRH-211ENST00000629427 RAD52P43351 418 aa10.9□□□□□ -0.66
SHPRH-211ENST00000629427 GSK3AP49840 483 aa10.9□□□□□ -0.66
SHPRH-211ENST00000629427 EPHA5P54756 1037 aa10.9□□□□□ -0.66
SHPRH-211ENST00000629427 DESI1Q6ICB0 168 aa10.9□□□□□ -0.66
SHPRH-211ENST00000629427 SPARTQ8N0X7 666 aa10.9□□□□□ -0.66
SHPRH-211ENST00000629427 OR5M1Q8NGP8 315 aa10.9□□□□□ -0.66
SHPRH-211ENST00000629427 GINS3Q9BRX5 216 aa10.9□□□□□ -0.66
SHPRH-211ENST00000629427 HDAC8Q9BY41 377 aa10.9□□□□□ -0.66
SHPRH-211ENST00000629427 CSNK1G1Q9HCP0 422 aa10.9□□□□□ -0.66
SHPRH-211ENST00000629427 HSFX1Q9UBD0 423 aa10.9□□□□□ -0.66
SHPRH-211ENST00000629427 PPP6CO00743 305 aa10.9□□□□□ -0.67
SHPRH-211ENST00000629427 IMPA2O14732 288 aa10.9□□□□□ -0.67
SHPRH-211ENST00000629427 HSD17B6O14756 317 aa10.9□□□□□ -0.67
SHPRH-211ENST00000629427 APEHP13798 732 aaKnown RBP10.9□□□□□ -0.67
SHPRH-211ENST00000629427 TAS2R30P59541 319 aa10.9□□□□□ -0.67
SHPRH-211ENST00000629427 MRPS34P82930 218 aaKnown RBP10.9□□□□□ -0.67
SHPRH-211ENST00000629427 BAXQ07812 192 aa10.9□□□□□ -0.67
SHPRH-211ENST00000629427 ZNF546Q86UE3 836 aa10.9□□□□□ -0.67
SHPRH-211ENST00000629427 RNF113BQ8IZP6 322 aaKnown RBP10.9□□□□□ -0.67
SHPRH-211ENST00000629427 GTF2H4Q92759 462 aa10.9□□□□□ -0.67
SHPRH-211ENST00000629427 TMED7-TICAM2A0A0A6YYA0 188 aa10.89□□□□□ -0.67
SHPRH-211ENST00000629427 TLCD2A6NGC4 264 aa10.89□□□□□ -0.67
SHPRH-211ENST00000629427 MRPS14O60783 128 aaKnown RBP10.89□□□□□ -0.67
SHPRH-211ENST00000629427 PRAF2O60831 178 aa10.89□□□□□ -0.67
SHPRH-211ENST00000629427 OLFM2O95897 454 aa10.89□□□□□ -0.67
SHPRH-211ENST00000629427 CPT2P23786 658 aa10.89□□□□□ -0.67
SHPRH-211ENST00000629427 IL3RAP26951 378 aa10.89□□□□□ -0.67
SHPRH-211ENST00000629427 LEXMQ3ZCV2 418 aa10.89□□□□□ -0.67
SHPRH-211ENST00000629427 SYT13Q7L8C5 426 aa10.89□□□□□ -0.67
SHPRH-211ENST00000629427 SLC46A1Q96NT5 459 aa10.89□□□□□ -0.67
SHPRH-211ENST00000629427 TSSK2Q96PF2 358 aa10.89□□□□□ -0.67
SHPRH-211ENST00000629427 SORT1Q99523 831 aa10.89□□□□□ -0.67
SHPRH-211ENST00000629427 TMED7Q9Y3B3 224 aa10.89□□□□□ -0.67
SHPRH-211ENST00000629427 MYO5AQ9Y4I1 1855 aaKnown RBP10.89□□□□□ -0.67
SHPRH-211ENST00000629427 GASTP01350 101 aa10.89□□□□□ -0.67
SHPRH-211ENST00000629427 CDK4P11802 303 aa10.89□□□□□ -0.67
SHPRH-211ENST00000629427 BCKDHBP21953 392 aa10.89□□□□□ -0.67
SHPRH-211ENST00000629427 ALG12Q9BV10 488 aa10.89□□□□□ -0.67
SHPRH-211ENST00000629427 TPPP3Q9BW30 176 aa10.89□□□□□ -0.67
SHPRH-211ENST00000629427 ENPP5Q9UJA9 477 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms