RNA–Protein interactions for RNA: ENST00000621897.1

BRCA1-229, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 375 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-229ENST00000621897 WDR45Q9Y484 360 aa2.99□□□□□ -1.93
BRCA1-229ENST00000621897 IGHV3-35A0A0C4DH35 117 aa2.98□□□□□ -1.93
BRCA1-229ENST00000621897 A0A1B0GVL5 298 aa2.98□□□□□ -1.93
BRCA1-229ENST00000621897 RAB19A4D1S5 217 aa2.98□□□□□ -1.93
BRCA1-229ENST00000621897 FRG2CA6NGY1 282 aa2.98□□□□□ -1.93
BRCA1-229ENST00000621897 OR6C70A6NIJ9 312 aa2.98□□□□□ -1.93
BRCA1-229ENST00000621897 A8MUA0 341 aa2.98□□□□□ -1.93
BRCA1-229ENST00000621897 E7ESA3 106 aa2.98□□□□□ -1.93
BRCA1-229ENST00000621897 H3BQV1 296 aa2.98□□□□□ -1.93
BRCA1-229ENST00000621897 GPR171O14626 319 aa2.98□□□□□ -1.93
BRCA1-229ENST00000621897 CHUKO15111 745 aa2.98□□□□□ -1.93
BRCA1-229ENST00000621897 COCHO43405 550 aa2.98□□□□□ -1.93
BRCA1-229ENST00000621897 ANP32DO95626 131 aa2.98□□□□□ -1.93
BRCA1-229ENST00000621897 EPOP01588 193 aa2.98□□□□□ -1.93
BRCA1-229ENST00000621897 FCER2P06734 321 aa2.98□□□□□ -1.93
BRCA1-229ENST00000621897 SERPINE2P07093 398 aa2.98□□□□□ -1.93
BRCA1-229ENST00000621897 DCNP07585 359 aaKnown RBP2.98□□□□□ -1.93
BRCA1-229ENST00000621897 P0C879 139 aa2.98□□□□□ -1.93
BRCA1-229ENST00000621897 HSD17B1P14061 328 aa2.98□□□□□ -1.93
BRCA1-229ENST00000621897 STOMP27105 288 aa2.98□□□□□ -1.93
BRCA1-229ENST00000621897 LAP3P28838 519 aa2.98□□□□□ -1.93
BRCA1-229ENST00000621897 PPP2R1BP30154 601 aa2.98□□□□□ -1.93
BRCA1-229ENST00000621897 CBX5P45973 191 aa2.98□□□□□ -1.93
BRCA1-229ENST00000621897 KCNK10P57789 538 aa2.98□□□□□ -1.93
BRCA1-229ENST00000621897 GABPAQ06546 454 aa2.98□□□□□ -1.93
BRCA1-229ENST00000621897 PMS2P3Q13401 168 aa2.98□□□□□ -1.93
BRCA1-229ENST00000621897 ILKQ13418 452 aa2.98□□□□□ -1.93
BRCA1-229ENST00000621897 ITIH4Q14624 930 aa2.98□□□□□ -1.93
BRCA1-229ENST00000621897 MEF2DQ14814 521 aa2.98□□□□□ -1.93
BRCA1-229ENST00000621897 LINC01620Q4KN68 170 aa2.98□□□□□ -1.93
BRCA1-229ENST00000621897 DNAL1Q4LDG9 190 aa2.98□□□□□ -1.93
BRCA1-229ENST00000621897 CDKL4Q5MAI5 379 aa2.98□□□□□ -1.93
BRCA1-229ENST00000621897 LGSNQ5TDP6 509 aa2.98□□□□□ -1.93
BRCA1-229ENST00000621897 ZNF658Q5TYW1 1059 aaPredicted RBP2.98□□□□□ -1.93
BRCA1-229ENST00000621897 LIPKQ5VXJ0 399 aa2.98□□□□□ -1.93
BRCA1-229ENST00000621897 FAM219BQ5XKK7 198 aa2.98□□□□□ -1.93
BRCA1-229ENST00000621897 OR4F3Q6IEY1 312 aa2.98□□□□□ -1.93
BRCA1-229ENST00000621897 ZNF544Q6NX49 715 aa2.98□□□□□ -1.93
BRCA1-229ENST00000621897 C1orf94Q6P1W5 598 aa2.98□□□□□ -1.93
BRCA1-229ENST00000621897 NCCRP1Q6ZVX7 275 aaPredicted RBP2.98□□□□□ -1.93
BRCA1-229ENST00000621897 SLC35D2Q76EJ3 337 aa2.98□□□□□ -1.93
BRCA1-229ENST00000621897 H2BFWTQ7Z2G1 175 aa2.98□□□□□ -1.93
BRCA1-229ENST00000621897 ABHD12BQ7Z5M8 362 aaPredicted RBP2.98□□□□□ -1.93
BRCA1-229ENST00000621897 SLC26A11Q86WA9 606 aa2.98□□□□□ -1.93
BRCA1-229ENST00000621897 MFSD6LQ8IWD5 586 aa2.98□□□□□ -1.93
BRCA1-229ENST00000621897 TMEM123Q8N131 208 aa2.98□□□□□ -1.93
BRCA1-229ENST00000621897 ALLCQ8N6M5 410 aa2.98□□□□□ -1.93
BRCA1-229ENST00000621897 OR2L3Q8NG85 312 aa2.98□□□□□ -1.93
BRCA1-229ENST00000621897 OR5AU1Q8NGC0 362 aa2.98□□□□□ -1.93
BRCA1-229ENST00000621897 HTR3CQ8WXA8 447 aa2.98□□□□□ -1.93
BRCA1-229ENST00000621897 P3H4Q92791 437 aa2.98□□□□□ -1.93
BRCA1-229ENST00000621897 ADIPOR1Q96A54 375 aa2.98□□□□□ -1.93
BRCA1-229ENST00000621897 OPTNQ96CV9 577 aa2.98□□□□□ -1.93
BRCA1-229ENST00000621897 SH3YL1Q96HL8 342 aaPredicted RBP2.98□□□□□ -1.93
BRCA1-229ENST00000621897 GLT1D1Q96MS3 346 aa2.98□□□□□ -1.93
BRCA1-229ENST00000621897 ZNF578Q96N58 590 aaPredicted RBP2.98□□□□□ -1.93
BRCA1-229ENST00000621897 TMEM246Q9BRR3 403 aa2.98□□□□□ -1.93
BRCA1-229ENST00000621897 PELOQ9BRX2 385 aaKnown RBP2.98□□□□□ -1.93
BRCA1-229ENST00000621897 CNPY3Q9BT09 278 aa2.98□□□□□ -1.93
BRCA1-229ENST00000621897 CHID1Q9BWS9 393 aa2.98□□□□□ -1.93
BRCA1-229ENST00000621897 HINT2Q9BX68 163 aa2.98□□□□□ -1.93
BRCA1-229ENST00000621897 GSDMCQ9BYG8 508 aa2.98□□□□□ -1.93
BRCA1-229ENST00000621897 UPF3BQ9BZI7 483 aaKnown RBP2.98□□□□□ -1.93
BRCA1-229ENST00000621897 ROGDIQ9GZN7 287 aa2.98□□□□□ -1.93
BRCA1-229ENST00000621897 ILKAPQ9H0C8 392 aaPredicted RBP2.98□□□□□ -1.93
BRCA1-229ENST00000621897 OR51V1Q9H2C8 321 aa2.98□□□□□ -1.93
BRCA1-229ENST00000621897 SAV1Q9H4B6 383 aaPredicted RBP2.98□□□□□ -1.93
BRCA1-229ENST00000621897 IKZF5Q9H5V7 419 aa2.98□□□□□ -1.93
BRCA1-229ENST00000621897 ASB8Q9H765 288 aa2.98□□□□□ -1.93
BRCA1-229ENST00000621897 LPAR2Q9HBW0 351 aa2.98□□□□□ -1.93
BRCA1-229ENST00000621897 RAB18Q9NP72 206 aa2.98□□□□□ -1.93
BRCA1-229ENST00000621897 DYRK4Q9NR20 520 aa2.98□□□□□ -1.93
BRCA1-229ENST00000621897 TREX1Q9NSU2 369 aa2.98□□□□□ -1.93
BRCA1-229ENST00000621897 ELOVL2Q9NXB9 296 aa2.98□□□□□ -1.93
BRCA1-229ENST00000621897 PAQR5Q9NXK6 330 aaPredicted RBP2.98□□□□□ -1.93
BRCA1-229ENST00000621897 SENP1Q9P0U3 644 aa2.98□□□□□ -1.93
BRCA1-229ENST00000621897 EIF3KQ9UBQ5 218 aaKnown RBP2.98□□□□□ -1.93
BRCA1-229ENST00000621897 LHX3Q9UBR4 397 aa2.98□□□□□ -1.93
BRCA1-229ENST00000621897 DCDC2Q9UHG0 476 aa2.98□□□□□ -1.93
BRCA1-229ENST00000621897 PHF11Q9UIL8 331 aa2.98□□□□□ -1.93
BRCA1-229ENST00000621897 NAGKQ9UJ70 344 aa2.98□□□□□ -1.93
BRCA1-229ENST00000621897 FHOD3Q2V2M9 1422 aa2.98□□□□□ -1.93
BRCA1-229ENST00000621897 PTPRUQ92729 1446 aa2.98□□□□□ -1.93
BRCA1-229ENST00000621897 A0A1B0GUA9 196 aa2.97□□□□□ -1.93
BRCA1-229ENST00000621897 A0A1W2PPE3 182 aa2.97□□□□□ -1.93
BRCA1-229ENST00000621897 SH3PXD2BA1X283 911 aa2.97□□□□□ -1.93
BRCA1-229ENST00000621897 NDUFAB1O14561 156 aa2.97□□□□□ -1.93
BRCA1-229ENST00000621897 TOR1AO14656 332 aa2.97□□□□□ -1.93
BRCA1-229ENST00000621897 SCAMP2O15127 329 aaKnown RBP2.97□□□□□ -1.93
BRCA1-229ENST00000621897 RAD51BO15315 384 aa2.97□□□□□ -1.93
BRCA1-229ENST00000621897 LATO43561 262 aa2.97□□□□□ -1.93
BRCA1-229ENST00000621897 TPST2O60704 377 aa2.97□□□□□ -1.93
BRCA1-229ENST00000621897 SEMA3DO95025 777 aa2.97□□□□□ -1.93
BRCA1-229ENST00000621897 NSA2O95478 260 aaKnown RBP2.97□□□□□ -1.93
BRCA1-229ENST00000621897 SERPINA6P08185 405 aa2.97□□□□□ -1.93
BRCA1-229ENST00000621897 CT45A8P0DMV1 189 aa2.97□□□□□ -1.93
BRCA1-229ENST00000621897 CT45A9P0DMV2 189 aa2.97□□□□□ -1.93
BRCA1-229ENST00000621897 MLNP12872 115 aa2.97□□□□□ -1.93
BRCA1-229ENST00000621897 PGAM2P15259 253 aa2.97□□□□□ -1.93
BRCA1-229ENST00000621897 TNNI1P19237 187 aa2.97□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 81 ms