RNA–Protein interactions for RNA: ENST00000618441.5

MATR3-227, Transcript of matrin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MATR3, Length 4,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-227ENST00000618441 GPR61Q9BZJ8 451 aa11.33□□□□□ -0.6
MATR3-227ENST00000618441 IGFLR1Q9H665 355 aa11.33□□□□□ -0.6
MATR3-227ENST00000618441 CLEC3BP05452 202 aa11.33□□□□□ -0.6
MATR3-227ENST00000618441 RAB5AP20339 215 aa11.33□□□□□ -0.6
MATR3-227ENST00000618441 ID4P47928 161 aa11.33□□□□□ -0.6
MATR3-227ENST00000618441 MANFP55145 182 aaKnown RBP11.33□□□□□ -0.6
MATR3-227ENST00000618441 ST8SIA6P61647 398 aa11.33□□□□□ -0.6
MATR3-227ENST00000618441 CNTN1Q12860 1018 aa11.33□□□□□ -0.6
MATR3-227ENST00000618441 SIRT6Q8N6T7 355 aa11.33□□□□□ -0.6
MATR3-227ENST00000618441 DCUN1D4Q92564 292 aa11.33□□□□□ -0.6
MATR3-227ENST00000618441 OR14A2Q96R54 314 aa11.33□□□□□ -0.6
MATR3-227ENST00000618441 IL19Q9UHD0 177 aa11.33□□□□□ -0.6
MATR3-227ENST00000618441 SPAG17Q6Q759 2223 aa11.33□□□□□ -0.6
MATR3-227ENST00000618441 TMEM235A6NFC5 223 aa11.33□□□□□ -0.6
MATR3-227ENST00000618441 SCN2BO60939 215 aa11.33□□□□□ -0.6
MATR3-227ENST00000618441 CSTAP01040 98 aa11.33□□□□□ -0.6
MATR3-227ENST00000618441 RPN2P04844 631 aa11.33□□□□□ -0.6
MATR3-227ENST00000618441 PXNP49023 591 aaPredicted RBP11.33□□□□□ -0.6
MATR3-227ENST00000618441 TAS2R50P59544 299 aa11.33□□□□□ -0.6
MATR3-227ENST00000618441 RPS13P62277 151 aaKnown RBP11.33□□□□□ -0.6
MATR3-227ENST00000618441 CBFBQ13951 182 aa11.33□□□□□ -0.6
MATR3-227ENST00000618441 NKPD1Q17RQ9 610 aa11.33□□□□□ -0.6
MATR3-227ENST00000618441 ZNF630Q2M218 657 aaPredicted RBP11.33□□□□□ -0.6
MATR3-227ENST00000618441 ZNF585AQ6P3V2 769 aa11.33□□□□□ -0.6
MATR3-227ENST00000618441 ZNF836Q6ZNA1 936 aa11.33□□□□□ -0.6
MATR3-227ENST00000618441 OR52N2Q8NGI0 321 aa11.33□□□□□ -0.6
MATR3-227ENST00000618441 PPTC7Q8NI37 304 aa11.33□□□□□ -0.6
MATR3-227ENST00000618441 OR8D1Q8WZ84 308 aa11.33□□□□□ -0.6
MATR3-227ENST00000618441 TCEAL2Q9H3H9 227 aaPredicted RBP11.33□□□□□ -0.6
MATR3-227ENST00000618441 OARD1Q9Y530 152 aa11.33□□□□□ -0.6
MATR3-227ENST00000618441 PUS1Q9Y606 427 aaKnown RBP eCLIP11.33□□□□□ -0.6
MATR3-227ENST00000618441 BLOC1S5-TXNDC5H3BN57 136 aa11.32□□□□□ -0.6
MATR3-227ENST00000618441 FKTNO75072 461 aa11.32□□□□□ -0.6
MATR3-227ENST00000618441 MT-ND4LP03901 98 aa11.32□□□□□ -0.6
MATR3-227ENST00000618441 RAG2P55895 527 aa11.32□□□□□ -0.6
MATR3-227ENST00000618441 CAP1Q01518 475 aa11.32□□□□□ -0.6
MATR3-227ENST00000618441 EOGTQ5NDL2 527 aa11.32□□□□□ -0.6
MATR3-227ENST00000618441 C10orf120Q5SQS8 335 aa11.32□□□□□ -0.6
MATR3-227ENST00000618441 SAPCD1Q5SSQ6 148 aa11.32□□□□□ -0.6
MATR3-227ENST00000618441 PLPPR4Q7Z2D5 763 aa11.32□□□□□ -0.6
MATR3-227ENST00000618441 SCD5Q86SK9 330 aa11.32□□□□□ -0.6
MATR3-227ENST00000618441 ZCCHC10Q8TBK6 192 aa11.32□□□□□ -0.6
MATR3-227ENST00000618441 PHYHIPQ92561 330 aa11.32□□□□□ -0.6
MATR3-227ENST00000618441 SEBOXQ9HB31 216 aaPredicted RBP11.32□□□□□ -0.6
MATR3-227ENST00000618441 PNO1Q9NRX1 252 aaKnown RBP11.32□□□□□ -0.6
MATR3-227ENST00000618441 GPATCH2Q9NW75 528 aa11.32□□□□□ -0.6
MATR3-227ENST00000618441 CBLCQ9ULV8 474 aa11.32□□□□□ -0.6
MATR3-227ENST00000618441 PHIPQ8WWQ0 1821 aa11.32□□□□□ -0.6
MATR3-227ENST00000618441 A0A0U1RQF3 1178 aa11.32□□□□□ -0.6
MATR3-227ENST00000618441 MED19A0JLT2 244 aaPredicted RBP11.32□□□□□ -0.6
MATR3-227ENST00000618441 FBXO45P0C2W1 286 aa11.32□□□□□ -0.6
MATR3-227ENST00000618441 C1GALT1C1LP0DN25 315 aa11.32□□□□□ -0.6
MATR3-227ENST00000618441 ATP1B3P54709 279 aa11.32□□□□□ -0.6
MATR3-227ENST00000618441 SMIM11AP58511 58 aa11.32□□□□□ -0.6
MATR3-227ENST00000618441 LIPNQ5VXI9 398 aa11.32□□□□□ -0.6
MATR3-227ENST00000618441 FBXL22Q6P050 247 aa11.32□□□□□ -0.6
MATR3-227ENST00000618441 UQCC3Q6UW78 93 aa11.32□□□□□ -0.6
MATR3-227ENST00000618441 RNF165Q6ZSG1 346 aa11.32□□□□□ -0.6
MATR3-227ENST00000618441 FRMD1Q8N878 549 aa11.32□□□□□ -0.6
MATR3-227ENST00000618441 CLUHP3Q96NS8 147 aa11.32□□□□□ -0.6
MATR3-227ENST00000618441 INSM2Q96T92 566 aaPredicted RBP11.32□□□□□ -0.6
MATR3-227ENST00000618441 ZNF649Q9BS31 505 aa11.32□□□□□ -0.6
MATR3-227ENST00000618441 FKRPQ9H9S5 495 aa11.32□□□□□ -0.6
MATR3-227ENST00000618441 KRCC1Q9NPI7 259 aaPredicted RBP11.32□□□□□ -0.6
MATR3-227ENST00000618441 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.32□□□□□ -0.6
MATR3-227ENST00000618441 RNASEK-C17orf49H0YIS7 233 aa11.32□□□□□ -0.6
MATR3-227ENST00000618441 MT-ND5P03915 603 aa11.32□□□□□ -0.6
MATR3-227ENST00000618441 DCNP07585 359 aaKnown RBP11.32□□□□□ -0.6
MATR3-227ENST00000618441 TIGD5Q53EQ6 642 aa11.32□□□□□ -0.6
MATR3-227ENST00000618441 HACD4Q5VWC8 232 aa11.32□□□□□ -0.6
MATR3-227ENST00000618441 PPP1R1CQ8WVI7 109 aa11.32□□□□□ -0.6
MATR3-227ENST00000618441 PDCD1LG2Q9BQ51 273 aa11.32□□□□□ -0.6
MATR3-227ENST00000618441 ASB6Q9NWX5 421 aa11.32□□□□□ -0.6
MATR3-227ENST00000618441 DENND4AQ7Z401 1863 aa11.32□□□□□ -0.6
MATR3-227ENST00000618441 CPED1A4D0V7 1026 aa11.32□□□□□ -0.6
MATR3-227ENST00000618441 RFPL4AA6NLU0 287 aa11.32□□□□□ -0.6
MATR3-227ENST00000618441 RFPL4AL1F8VTS6 287 aa11.32□□□□□ -0.6
MATR3-227ENST00000618441 KLK1P06870 262 aa11.32□□□□□ -0.6
MATR3-227ENST00000618441 F3P13726 295 aa11.32□□□□□ -0.6
MATR3-227ENST00000618441 PGAM2P15259 253 aa11.32□□□□□ -0.6
MATR3-227ENST00000618441 CD34P28906 385 aa11.32□□□□□ -0.6
MATR3-227ENST00000618441 GCH1P30793 250 aa11.32□□□□□ -0.6
MATR3-227ENST00000618441 NAA10P41227 235 aaPredicted RBP11.32□□□□□ -0.6
MATR3-227ENST00000618441 PNPLA4P41247 253 aa11.32□□□□□ -0.6
MATR3-227ENST00000618441 PSEN2P49810 448 aa11.32□□□□□ -0.6
MATR3-227ENST00000618441 MECP2P51608 486 aaKnown RBP11.32□□□□□ -0.6
MATR3-227ENST00000618441 GUCA2AQ02747 115 aa11.32□□□□□ -0.6
MATR3-227ENST00000618441 AWAT1Q58HT5 328 aa11.32□□□□□ -0.6
MATR3-227ENST00000618441 OR2M4Q96R27 311 aa11.32□□□□□ -0.6
MATR3-227ENST00000618441 NRIP2Q9BQI9 281 aa11.32□□□□□ -0.6
MATR3-227ENST00000618441 TMPRSS13Q9BYE2 586 aa11.32□□□□□ -0.6
MATR3-227ENST00000618441 CHTOPQ9Y3Y2 248 aaKnown RBP11.32□□□□□ -0.6
MATR3-227ENST00000618441 A0A0G2JN53 185 aa11.31□□□□□ -0.6
MATR3-227ENST00000618441 PPP1R2P9O14990 202 aa11.31□□□□□ -0.6
MATR3-227ENST00000618441 B3GAT3O94766 335 aa11.31□□□□□ -0.6
MATR3-227ENST00000618441 RPP14O95059 124 aaKnown RBP11.31□□□□□ -0.6
MATR3-227ENST00000618441 ETHE1O95571 254 aa11.31□□□□□ -0.6
MATR3-227ENST00000618441 IFNA10P01566 189 aa11.31□□□□□ -0.6
MATR3-227ENST00000618441 ZNF888P0CJ79 500 aaPredicted RBP11.31□□□□□ -0.6
MATR3-227ENST00000618441 ZNF616Q08AN1 781 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms