RNA–Protein interactions for RNA: ENST00000618207.4

CIITA-212, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 5 BASIC

Gene CIITA, Length 2,844 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-212ENST00000618207 NPAS1Q99742 590 aa11.29□□□□□ -0.6
CIITA-212ENST00000618207 CCDC32Q9BV29 185 aa11.29□□□□□ -0.6
CIITA-212ENST00000618207 MRTO4Q9UKD2 239 aaKnown RBP11.29□□□□□ -0.6
CIITA-212ENST00000618207 KNTC1P50748 2209 aa11.29□□□□□ -0.6
CIITA-212ENST00000618207 A8MV72 311 aaPredicted RBP11.29□□□□□ -0.6
CIITA-212ENST00000618207 ZNF354AO60765 605 aaPredicted RBP11.29□□□□□ -0.6
CIITA-212ENST00000618207 EDNRAP25101 427 aa11.29□□□□□ -0.6
CIITA-212ENST00000618207 SLC25A35Q3KQZ1 300 aa11.29□□□□□ -0.6
CIITA-212ENST00000618207 GLYR1Q49A26 553 aaPredicted RBP11.29□□□□□ -0.6
CIITA-212ENST00000618207 PHF19Q5T6S3 580 aa11.29□□□□□ -0.6
CIITA-212ENST00000618207 BICRALQ6AI39 1079 aa11.29□□□□□ -0.6
CIITA-212ENST00000618207 PWWP2BQ6NUJ5 590 aa11.29□□□□□ -0.6
CIITA-212ENST00000618207 OR1N1Q8NGS0 311 aa11.29□□□□□ -0.6
CIITA-212ENST00000618207 HOXD1Q9GZZ0 328 aa11.29□□□□□ -0.6
CIITA-212ENST00000618207 KCNN2Q9H2S1 579 aa11.29□□□□□ -0.6
CIITA-212ENST00000618207 URB1O60287 2271 aaKnown RBP11.29□□□□□ -0.6
CIITA-212ENST00000618207 TRBV2A0A0J9YWF9 115 aa11.28□□□□□ -0.6
CIITA-212ENST00000618207 ARHGEF9O43307 516 aa11.28□□□□□ -0.6
CIITA-212ENST00000618207 HIST1H2ABP04908 130 aa11.28□□□□□ -0.6
CIITA-212ENST00000618207 ACSM1Q08AH1 577 aa11.28□□□□□ -0.6
CIITA-212ENST00000618207 HLA-BQ31612 363 aa11.28□□□□□ -0.6
CIITA-212ENST00000618207 RFPL4BQ6ZWI9 263 aa11.28□□□□□ -0.6
CIITA-212ENST00000618207 HIST3H2AQ7L7L0 130 aa11.28□□□□□ -0.6
CIITA-212ENST00000618207 HIST1H2ACQ93077 130 aa11.28□□□□□ -0.6
CIITA-212ENST00000618207 WDFY2Q96P53 400 aa11.28□□□□□ -0.6
CIITA-212ENST00000618207 MED18Q9BUE0 208 aa11.28□□□□□ -0.6
CIITA-212ENST00000618207 ALG12Q9BV10 488 aa11.28□□□□□ -0.6
CIITA-212ENST00000618207 GALNT9Q9HCQ5 603 aa11.28□□□□□ -0.6
CIITA-212ENST00000618207 GRHPRQ9UBQ7 328 aa11.28□□□□□ -0.6
CIITA-212ENST00000618207 POU2F3Q9UKI9 436 aa11.28□□□□□ -0.6
CIITA-212ENST00000618207 RASD1Q9Y272 281 aa11.28□□□□□ -0.6
CIITA-212ENST00000618207 MN1Q10571 1320 aaPredicted RBP11.28□□□□□ -0.6
CIITA-212ENST00000618207 TMEM265A0A087WTH1 108 aa11.28□□□□□ -0.6
CIITA-212ENST00000618207 TMEM72A0PK05 275 aa11.28□□□□□ -0.6
CIITA-212ENST00000618207 ANKRD61A6NGH8 418 aa11.28□□□□□ -0.6
CIITA-212ENST00000618207 SCRG1O75711 98 aa11.28□□□□□ -0.6
CIITA-212ENST00000618207 SLC25A12O75746 678 aa11.28□□□□□ -0.6
CIITA-212ENST00000618207 PNMTP11086 282 aa11.28□□□□□ -0.6
CIITA-212ENST00000618207 RFX2P48378 723 aa11.28□□□□□ -0.6
CIITA-212ENST00000618207 GDI2P50395 445 aaKnown RBP11.28□□□□□ -0.6
CIITA-212ENST00000618207 FBXW4P57775 412 aa11.28□□□□□ -0.6
CIITA-212ENST00000618207 PRPS1P60891 318 aa11.28□□□□□ -0.6
CIITA-212ENST00000618207 COX15Q7KZN9 410 aa11.28□□□□□ -0.6
CIITA-212ENST00000618207 GPALPP1Q8IXQ4 340 aa11.28□□□□□ -0.6
CIITA-212ENST00000618207 ZNF440Q8IYI8 595 aa11.28□□□□□ -0.6
CIITA-212ENST00000618207 Q8N402 240 aa11.28□□□□□ -0.6
CIITA-212ENST00000618207 SAMD12Q8N8I0 201 aa11.28□□□□□ -0.6
CIITA-212ENST00000618207 FAM71CQ8NEG0 241 aa11.28□□□□□ -0.6
CIITA-212ENST00000618207 HSD17B8Q92506 261 aa11.28□□□□□ -0.6
CIITA-212ENST00000618207 PGLYRP3Q96LB9 341 aa11.28□□□□□ -0.6
CIITA-212ENST00000618207 OR14A2Q96R54 314 aa11.28□□□□□ -0.6
CIITA-212ENST00000618207 UQCC2Q9BRT2 126 aa11.28□□□□□ -0.6
CIITA-212ENST00000618207 SYT4Q9H2B2 425 aa11.28□□□□□ -0.6
CIITA-212ENST00000618207 B3GAT2Q9NPZ5 323 aa11.28□□□□□ -0.6
CIITA-212ENST00000618207 A0A1B0GTH9 108 aa11.27□□□□□ -0.6
CIITA-212ENST00000618207 PRR32B1ATL7 298 aa11.27□□□□□ -0.6
CIITA-212ENST00000618207 OPN1LWP04000 364 aa11.27□□□□□ -0.6
CIITA-212ENST00000618207 HEXBP07686 556 aa11.27□□□□□ -0.6
CIITA-212ENST00000618207 ELK1P19419 428 aa11.27□□□□□ -0.6
CIITA-212ENST00000618207 EPHA8P29322 1005 aaPredicted RBP11.27□□□□□ -0.6
CIITA-212ENST00000618207 SCN1BQ07699 218 aa11.27□□□□□ -0.6
CIITA-212ENST00000618207 LGALS3BPQ08380 585 aa11.27□□□□□ -0.6
CIITA-212ENST00000618207 CDC20Q12834 499 aa11.27□□□□□ -0.6
CIITA-212ENST00000618207 NKAIN1Q4KMZ8 207 aa11.27□□□□□ -0.6
CIITA-212ENST00000618207 TMEM71Q6P5X7 295 aa11.27□□□□□ -0.6
CIITA-212ENST00000618207 LURAP1LQ8IV03 231 aa11.27□□□□□ -0.6
CIITA-212ENST00000618207 THAP4Q8WY91 577 aa11.27□□□□□ -0.6
CIITA-212ENST00000618207 TMCO6Q96DC7 493 aa11.27□□□□□ -0.6
CIITA-212ENST00000618207 C11orf54Q9H0W9 315 aaPredicted RBP11.27□□□□□ -0.6
CIITA-212ENST00000618207 GAREM1Q9H706 876 aa11.27□□□□□ -0.6
CIITA-212ENST00000618207 SIAEQ9HAT2 523 aa11.27□□□□□ -0.6
CIITA-212ENST00000618207 EXTL2Q9UBQ6 330 aa11.27□□□□□ -0.6
CIITA-212ENST00000618207 POLHQ9Y253 713 aa11.27□□□□□ -0.6
CIITA-212ENST00000618207 VDAC3Q9Y277 283 aa11.27□□□□□ -0.6
CIITA-212ENST00000618207 MRPS7Q9Y2R9 242 aaKnown RBP11.27□□□□□ -0.6
CIITA-212ENST00000618207 RBMX2Q9Y388 322 aaKnown RBP11.27□□□□□ -0.6
CIITA-212ENST00000618207 SHISA8B8ZZ34 492 aa11.27□□□□□ -0.61
CIITA-212ENST00000618207 PLPP2O43688 288 aa11.27□□□□□ -0.61
CIITA-212ENST00000618207 CD14P08571 375 aa11.27□□□□□ -0.61
CIITA-212ENST00000618207 OR8G3PP0DMU2 310 aa11.27□□□□□ -0.61
CIITA-212ENST00000618207 SDHBP21912 280 aa11.27□□□□□ -0.61
CIITA-212ENST00000618207 F8A1P23610 371 aa11.27□□□□□ -0.61
CIITA-212ENST00000618207 MYL9P24844 172 aa11.27□□□□□ -0.61
CIITA-212ENST00000618207 GALNSP34059 522 aa11.27□□□□□ -0.61
CIITA-212ENST00000618207 OR2B6P58173 313 aa11.27□□□□□ -0.61
CIITA-212ENST00000618207 LCN10Q6JVE6 187 aa11.27□□□□□ -0.61
CIITA-212ENST00000618207 FAM199XQ6PEV8 388 aaPredicted RBP11.27□□□□□ -0.61
CIITA-212ENST00000618207 XKRXQ6PP77 449 aa11.27□□□□□ -0.61
CIITA-212ENST00000618207 WDR74Q6RFH5 385 aaPredicted RBP11.27□□□□□ -0.61
CIITA-212ENST00000618207 LILRB2Q8N423 598 aa11.27□□□□□ -0.61
CIITA-212ENST00000618207 OR14A16Q8NHC5 309 aa11.27□□□□□ -0.61
CIITA-212ENST00000618207 GUCD1Q96NT3 240 aa11.27□□□□□ -0.61
CIITA-212ENST00000618207 CHRNA10Q9GZZ6 450 aa11.27□□□□□ -0.61
CIITA-212ENST00000618207 SMOC1Q9H4F8 434 aa11.27□□□□□ -0.61
CIITA-212ENST00000618207 ZNF768Q9H5H4 540 aaKnown RBP11.27□□□□□ -0.61
CIITA-212ENST00000618207 KLHL21Q9UJP4 597 aa11.27□□□□□ -0.61
CIITA-212ENST00000618207 SLC6A5Q9Y345 797 aa11.27□□□□□ -0.61
CIITA-212ENST00000618207 AK6Q9Y3D8 172 aaKnown RBP11.27□□□□□ -0.61
CIITA-212ENST00000618207 AHCTF1Q8WYP5 2266 aa11.27□□□□□ -0.61
CIITA-212ENST00000618207 ACOD1A6NK06 481 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms