RNA–Protein interactions for RNA: ENST00000618081.4

CCDC144B-208, Transcript of coiled-coil domain containing 144B (pseudogene), humanhuman

TSL 1 (best) BASIC

Gene CCDC144B, Length 8,688 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144B-208ENST00000618081 SDC1P18827 310 aa10.4□□□□□ -0.75
CCDC144B-208ENST00000618081 CD68P34810 354 aaPredicted RBP10.4□□□□□ -0.75
CCDC144B-208ENST00000618081 EVI2BP34910 448 aa10.4□□□□□ -0.75
CCDC144B-208ENST00000618081 MGAT3Q09327 533 aa10.4□□□□□ -0.75
CCDC144B-208ENST00000618081 HBMQ6B0K9 141 aa10.4□□□□□ -0.75
CCDC144B-208ENST00000618081 CHTF18Q8WVB6 975 aa10.4□□□□□ -0.75
CCDC144B-208ENST00000618081 NUDT22Q9BRQ3 303 aa10.4□□□□□ -0.75
CCDC144B-208ENST00000618081 CALHM2Q9HA72 323 aa10.4□□□□□ -0.75
CCDC144B-208ENST00000618081 LCMT2O60294 686 aaKnown RBP10.39□□□□□ -0.75
CCDC144B-208ENST00000618081 ABHD16AO95870 558 aa10.39□□□□□ -0.75
CCDC144B-208ENST00000618081 OR8U8P0C7N1 319 aa10.39□□□□□ -0.75
CCDC144B-208ENST00000618081 PRSS56P0CW18 603 aa10.39□□□□□ -0.75
CCDC144B-208ENST00000618081 KHDC1LQ5JSQ8 128 aa10.39□□□□□ -0.75
CCDC144B-208ENST00000618081 ZNF546Q86UE3 836 aa10.39□□□□□ -0.75
CCDC144B-208ENST00000618081 SLC39A11Q8N1S5 342 aa10.39□□□□□ -0.75
CCDC144B-208ENST00000618081 GPR26Q8NDV2 337 aa10.39□□□□□ -0.75
CCDC144B-208ENST00000618081 ISYNA1Q9NPH2 558 aa10.39□□□□□ -0.75
CCDC144B-208ENST00000618081 MOKQ9UQ07 419 aa10.39□□□□□ -0.75
CCDC144B-208ENST00000618081 H0YGG7 62 aa10.39□□□□□ -0.75
CCDC144B-208ENST00000618081 HLA-DOBP13765 273 aa10.39□□□□□ -0.75
CCDC144B-208ENST00000618081 MRPS34P82930 218 aaKnown RBP10.39□□□□□ -0.75
CCDC144B-208ENST00000618081 TMEM185AQ8NFB2 350 aa10.39□□□□□ -0.75
CCDC144B-208ENST00000618081 TEX51A0A1B0GUA7 166 aa10.39□□□□□ -0.75
CCDC144B-208ENST00000618081 G3V2L1 256 aa10.39□□□□□ -0.75
CCDC144B-208ENST00000618081 OPN1LWP04000 364 aa10.39□□□□□ -0.75
CCDC144B-208ENST00000618081 ERV3-1Q14264 604 aa10.39□□□□□ -0.75
CCDC144B-208ENST00000618081 HNF4GQ14541 408 aa10.39□□□□□ -0.75
CCDC144B-208ENST00000618081 C17orf99Q6UX52 265 aa10.39□□□□□ -0.75
CCDC144B-208ENST00000618081 STT3BQ8TCJ2 826 aa10.39□□□□□ -0.75
CCDC144B-208ENST00000618081 CRYZL1O95825 349 aa10.39□□□□□ -0.75
CCDC144B-208ENST00000618081 CCL11P51671 97 aa10.39□□□□□ -0.75
CCDC144B-208ENST00000618081 DLX5P56178 289 aa10.39□□□□□ -0.75
CCDC144B-208ENST00000618081 TLE1Q04724 770 aa10.39□□□□□ -0.75
CCDC144B-208ENST00000618081 SHEQ5VZ18 495 aa10.39□□□□□ -0.75
CCDC144B-208ENST00000618081 APOOLQ6UXV4 268 aa10.39□□□□□ -0.75
CCDC144B-208ENST00000618081 COX15Q7KZN9 410 aa10.39□□□□□ -0.75
CCDC144B-208ENST00000618081 VN1R2Q8NFZ6 395 aa10.39□□□□□ -0.75
CCDC144B-208ENST00000618081 GSTO2Q9H4Y5 243 aa10.39□□□□□ -0.75
CCDC144B-208ENST00000618081 RASD1Q9Y272 281 aa10.39□□□□□ -0.75
CCDC144B-208ENST00000618081 ZNF701M0R085 212 aaPredicted RBP10.39□□□□□ -0.75
CCDC144B-208ENST00000618081 FRS3O43559 492 aa10.39□□□□□ -0.75
CCDC144B-208ENST00000618081 SELEP16581 610 aa10.39□□□□□ -0.75
CCDC144B-208ENST00000618081 SNRPD2P62316 118 aaKnown RBP10.39□□□□□ -0.75
CCDC144B-208ENST00000618081 PGGHGQ32M88 737 aa10.39□□□□□ -0.75
CCDC144B-208ENST00000618081 ZMAT1Q5H9K5 638 aa10.39□□□□□ -0.75
CCDC144B-208ENST00000618081 OR7E24Q6IFN5 339 aa10.39□□□□□ -0.75
CCDC144B-208ENST00000618081 RPL22L1Q6P5R6 122 aaKnown RBP10.39□□□□□ -0.75
CCDC144B-208ENST00000618081 SPARTQ8N0X7 666 aa10.39□□□□□ -0.75
CCDC144B-208ENST00000618081 SLC46A1Q96NT5 459 aa10.39□□□□□ -0.75
CCDC144B-208ENST00000618081 SEMA4GQ9NTN9 838 aa10.39□□□□□ -0.75
CCDC144B-208ENST00000618081 LRIT2A6NDA9 550 aa10.39□□□□□ -0.75
CCDC144B-208ENST00000618081 ZNF593O00488 134 aaPredicted RBP10.39□□□□□ -0.75
CCDC144B-208ENST00000618081 ADH4P08319 380 aa10.39□□□□□ -0.75
CCDC144B-208ENST00000618081 HOXB5P09067 269 aa10.39□□□□□ -0.75
CCDC144B-208ENST00000618081 TMEM11P17152 192 aa10.39□□□□□ -0.75
CCDC144B-208ENST00000618081 FKBP2P26885 142 aaKnown RBP10.39□□□□□ -0.75
CCDC144B-208ENST00000618081 SLC5A2P31639 672 aa10.39□□□□□ -0.75
CCDC144B-208ENST00000618081 OR1D4P47884 311 aa10.39□□□□□ -0.75
CCDC144B-208ENST00000618081 BAXQ07812 192 aa10.39□□□□□ -0.75
CCDC144B-208ENST00000618081 IL10RAQ13651 578 aa10.39□□□□□ -0.75
CCDC144B-208ENST00000618081 PODNL1Q6PEZ8 512 aa10.39□□□□□ -0.75
CCDC144B-208ENST00000618081 ZPBPQ9BS86 351 aa10.39□□□□□ -0.75
CCDC144B-208ENST00000618081 ANKRD60Q9BZ19 345 aa10.39□□□□□ -0.75
CCDC144B-208ENST00000618081 MED17Q9NVC6 651 aa10.39□□□□□ -0.75
CCDC144B-208ENST00000618081 IL17CQ9P0M4 197 aa10.39□□□□□ -0.75
CCDC144B-208ENST00000618081 KIAA1456Q9P272 454 aa10.39□□□□□ -0.75
CCDC144B-208ENST00000618081 ZNF732B4DXR9 585 aa10.39□□□□□ -0.75
CCDC144B-208ENST00000618081 H3BNC9 293 aa10.39□□□□□ -0.75
CCDC144B-208ENST00000618081 GIFP27352 417 aa10.39□□□□□ -0.75
CCDC144B-208ENST00000618081 HOXC8P31273 242 aa10.39□□□□□ -0.75
CCDC144B-208ENST00000618081 CYB561P49447 251 aa10.39□□□□□ -0.75
CCDC144B-208ENST00000618081 GPLD1P80108 840 aa10.39□□□□□ -0.75
CCDC144B-208ENST00000618081 COL9A2Q14055 689 aaPredicted RBP10.39□□□□□ -0.75
CCDC144B-208ENST00000618081 GDPD3Q7L5L3 318 aa10.39□□□□□ -0.75
CCDC144B-208ENST00000618081 RNF170Q96K19 258 aa10.39□□□□□ -0.75
CCDC144B-208ENST00000618081 WASH4PA8MWX3 477 aa10.38□□□□□ -0.75
CCDC144B-208ENST00000618081 FAM189BP81408 668 aa10.38□□□□□ -0.75
CCDC144B-208ENST00000618081 SVBPQ8N300 66 aa10.38□□□□□ -0.75
CCDC144B-208ENST00000618081 NXPE3Q969Y0 559 aa10.38□□□□□ -0.75
CCDC144B-208ENST00000618081 SORBS1Q9BX66 1292 aaKnown RBP10.38□□□□□ -0.75
CCDC144B-208ENST00000618081 CLMPQ9H6B4 373 aa10.38□□□□□ -0.75
CCDC144B-208ENST00000618081 ATP13A2Q9NQ11 1180 aa10.38□□□□□ -0.75
CCDC144B-208ENST00000618081 AGAP14A8MT82 685 aa10.38□□□□□ -0.75
CCDC144B-208ENST00000618081 HLA-HP01893 362 aa10.38□□□□□ -0.75
CCDC144B-208ENST00000618081 SUB1P53999 127 aaKnown RBP eCLIP10.38□□□□□ -0.75
CCDC144B-208ENST00000618081 INHBCP55103 352 aa10.38□□□□□ -0.75
CCDC144B-208ENST00000618081 SIRPAP78324 504 aa10.38□□□□□ -0.75
CCDC144B-208ENST00000618081 MLLT11Q13015 90 aaPredicted RBP10.38□□□□□ -0.75
CCDC144B-208ENST00000618081 SECTM1Q8WVN6 248 aa10.38□□□□□ -0.75
CCDC144B-208ENST00000618081 WDR76Q9H967 626 aa10.38□□□□□ -0.75
CCDC144B-208ENST00000618081 NOX3Q9HBY0 568 aa10.38□□□□□ -0.75
CCDC144B-208ENST00000618081 MT-ND4P03905 459 aa10.38□□□□□ -0.75
CCDC144B-208ENST00000618081 EDN1P05305 212 aa10.38□□□□□ -0.75
CCDC144B-208ENST00000618081 PRDX1Q06830 199 aaKnown RBP10.38□□□□□ -0.75
CCDC144B-208ENST00000618081 ZNF691Q5VV52 312 aa10.38□□□□□ -0.75
CCDC144B-208ENST00000618081 FAM199XQ6PEV8 388 aaPredicted RBP10.38□□□□□ -0.75
CCDC144B-208ENST00000618081 C15orf39Q6ZRI6 1047 aa10.38□□□□□ -0.75
CCDC144B-208ENST00000618081 SYT13Q7L8C5 426 aa10.38□□□□□ -0.75
CCDC144B-208ENST00000618081 CD300AQ9UGN4 299 aa10.38□□□□□ -0.75
CCDC144B-208ENST00000618081 TMEM221A6NGB7 291 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms