RNA–Protein interactions for RNA: ENST00000617103.4

CLTCL1-209, Transcript of clathrin heavy chain like 1, humanhuman

TSL 1 (best)

Gene CLTCL1, Length 4,859 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-209ENST00000617103 CPEP16870 476 aa9.89□□□□□ -0.83
CLTCL1-209ENST00000617103 GABRB1P18505 474 aa9.89□□□□□ -0.83
CLTCL1-209ENST00000617103 ARNTP27540 789 aa9.89□□□□□ -0.83
CLTCL1-209ENST00000617103 TGFBR1P36897 503 aa9.89□□□□□ -0.83
CLTCL1-209ENST00000617103 EXOSC2Q13868 293 aaKnown RBP9.89□□□□□ -0.83
CLTCL1-209ENST00000617103 Q6ZTK2 550 aa9.89□□□□□ -0.83
CLTCL1-209ENST00000617103 AMIGO3Q86WK7 504 aa9.89□□□□□ -0.83
CLTCL1-209ENST00000617103 CMIPQ8IY22 773 aa9.89□□□□□ -0.83
CLTCL1-209ENST00000617103 ZBTB44Q8NCP5 570 aa9.89□□□□□ -0.83
CLTCL1-209ENST00000617103 KCNG3Q8TAE7 436 aa9.89□□□□□ -0.83
CLTCL1-209ENST00000617103 SDSLQ96GA7 329 aa9.89□□□□□ -0.83
CLTCL1-209ENST00000617103 SLC41A2Q96JW4 573 aa9.89□□□□□ -0.83
CLTCL1-209ENST00000617103 TGIF2Q9GZN2 237 aa9.89□□□□□ -0.83
CLTCL1-209ENST00000617103 ZNF286AQ9HBT8 521 aa9.89□□□□□ -0.83
CLTCL1-209ENST00000617103 DNAJC25-GNG10A0A024R161 153 aa9.89□□□□□ -0.83
CLTCL1-209ENST00000617103 SGK494L7N484 410 aa9.89□□□□□ -0.83
CLTCL1-209ENST00000617103 OR2F2O95006 317 aa9.89□□□□□ -0.83
CLTCL1-209ENST00000617103 CSF3P09919 207 aa9.89□□□□□ -0.83
CLTCL1-209ENST00000617103 ANXA7P20073 488 aaKnown RBP9.89□□□□□ -0.83
CLTCL1-209ENST00000617103 PSMB5P28074 263 aa9.89□□□□□ -0.83
CLTCL1-209ENST00000617103 TEAD1P28347 426 aa9.89□□□□□ -0.83
CLTCL1-209ENST00000617103 TACR3P29371 465 aa9.89□□□□□ -0.83
CLTCL1-209ENST00000617103 EVX1P49640 407 aa9.89□□□□□ -0.83
CLTCL1-209ENST00000617103 CLDN20P56880 219 aa9.89□□□□□ -0.83
CLTCL1-209ENST00000617103 OR2F1Q13607 317 aa9.89□□□□□ -0.83
CLTCL1-209ENST00000617103 ALKBH1Q13686 389 aaKnown RBP9.89□□□□□ -0.83
CLTCL1-209ENST00000617103 RIMKLAQ8IXN7 391 aa9.89□□□□□ -0.83
CLTCL1-209ENST00000617103 PRR22Q8IZ63 422 aa9.89□□□□□ -0.83
CLTCL1-209ENST00000617103 BORCS7Q96B45 105 aa9.89□□□□□ -0.83
CLTCL1-209ENST00000617103 FAM3DQ96BQ1 224 aa9.89□□□□□ -0.83
CLTCL1-209ENST00000617103 ADOQ96SZ5 270 aa9.89□□□□□ -0.83
CLTCL1-209ENST00000617103 SELENOIQ9C0D9 397 aa9.89□□□□□ -0.83
CLTCL1-209ENST00000617103 GMEB2Q9UKD1 530 aa9.89□□□□□ -0.83
CLTCL1-209ENST00000617103 CICQ96RK0 1608 aaPredicted RBP9.89□□□□□ -0.83
CLTCL1-209ENST00000617103 A0A0A6YYC8 382 aaPredicted RBP9.89□□□□□ -0.83
CLTCL1-209ENST00000617103 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP9.89□□□□□ -0.83
CLTCL1-209ENST00000617103 I3L1I5 382 aaPredicted RBP9.89□□□□□ -0.83
CLTCL1-209ENST00000617103 M0QYG6 137 aa9.89□□□□□ -0.83
CLTCL1-209ENST00000617103 FXYD1O00168 92 aa9.89□□□□□ -0.83
CLTCL1-209ENST00000617103 ZNF593O00488 134 aaPredicted RBP9.89□□□□□ -0.83
CLTCL1-209ENST00000617103 AKR7A2O43488 359 aa9.89□□□□□ -0.83
CLTCL1-209ENST00000617103 S100A8P05109 93 aa9.89□□□□□ -0.83
CLTCL1-209ENST00000617103 ZNF865P0CJ78 1059 aaPredicted RBP9.89□□□□□ -0.83
CLTCL1-209ENST00000617103 HOXC13P31276 330 aa9.89□□□□□ -0.83
CLTCL1-209ENST00000617103 SLC19A1P41440 591 aa9.89□□□□□ -0.83
CLTCL1-209ENST00000617103 P2RX3P56373 397 aa9.89□□□□□ -0.83
CLTCL1-209ENST00000617103 MRPS34P82930 218 aaKnown RBP9.89□□□□□ -0.83
CLTCL1-209ENST00000617103 IAH1Q2TAA2 248 aaPredicted RBP9.89□□□□□ -0.83
CLTCL1-209ENST00000617103 ZNF542PQ5EBM4 170 aa9.89□□□□□ -0.83
CLTCL1-209ENST00000617103 NLRC3Q7RTR2 1065 aa9.89□□□□□ -0.83
CLTCL1-209ENST00000617103 OR13C9Q8NGT0 318 aa9.89□□□□□ -0.83
CLTCL1-209ENST00000617103 DVL3Q92997 716 aaPredicted RBP9.89□□□□□ -0.83
CLTCL1-209ENST00000617103 RSPRY1Q96DX4 576 aa9.89□□□□□ -0.83
CLTCL1-209ENST00000617103 FOXN4Q96NZ1 517 aa9.89□□□□□ -0.83
CLTCL1-209ENST00000617103 C1QTNF3Q9BXJ4 246 aa9.89□□□□□ -0.83
CLTCL1-209ENST00000617103 SLC25A32Q9H2D1 315 aa9.89□□□□□ -0.83
CLTCL1-209ENST00000617103 SCML1Q9UN30 329 aa9.89□□□□□ -0.83
CLTCL1-209ENST00000617103 TIAM2Q8IVF5 1701 aa9.89□□□□□ -0.83
CLTCL1-209ENST00000617103 TUBAL3A6NHL2 446 aa9.89□□□□□ -0.83
CLTCL1-209ENST00000617103 GJE1A6NN92 205 aa9.89□□□□□ -0.83
CLTCL1-209ENST00000617103 SFTPDP35247 375 aa9.89□□□□□ -0.83
CLTCL1-209ENST00000617103 SNTB1Q13884 538 aaKnown RBP9.89□□□□□ -0.83
CLTCL1-209ENST00000617103 ZNF74Q16587 644 aa9.89□□□□□ -0.83
CLTCL1-209ENST00000617103 PARS2Q7L3T8 475 aaKnown RBP9.89□□□□□ -0.83
CLTCL1-209ENST00000617103 OVCH1Q7RTY7 1134 aa9.89□□□□□ -0.83
CLTCL1-209ENST00000617103 SLC43A2Q8N370 569 aa9.89□□□□□ -0.83
CLTCL1-209ENST00000617103 OLIG1Q8TAK6 271 aa9.89□□□□□ -0.83
CLTCL1-209ENST00000617103 CHTF18Q8WVB6 975 aa9.89□□□□□ -0.83
CLTCL1-209ENST00000617103 OR5B2Q96R09 309 aa9.89□□□□□ -0.83
CLTCL1-209ENST00000617103 NMNAT3Q96T66 252 aa9.89□□□□□ -0.83
CLTCL1-209ENST00000617103 OR11A1Q9GZK7 315 aa9.89□□□□□ -0.83
CLTCL1-209ENST00000617103 LINC00597Q9H2U6 94 aa9.89□□□□□ -0.83
CLTCL1-209ENST00000617103 WDR76Q9H967 626 aa9.89□□□□□ -0.83
CLTCL1-209ENST00000617103 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP9.89□□□□□ -0.83
CLTCL1-209ENST00000617103 CLDND1Q9NY35 253 aa9.89□□□□□ -0.83
CLTCL1-209ENST00000617103 MUTYHQ9UIF7 546 aa9.89□□□□□ -0.83
CLTCL1-209ENST00000617103 VDAC3Q9Y277 283 aa9.89□□□□□ -0.83
CLTCL1-209ENST00000617103 A0A0A6YYJ9 748 aa9.88□□□□□ -0.83
CLTCL1-209ENST00000617103 A0A0J9YY10 115 aa9.88□□□□□ -0.83
CLTCL1-209ENST00000617103 ZAR1LA6NP61 321 aa9.88□□□□□ -0.83
CLTCL1-209ENST00000617103 IMPA2O14732 288 aa9.88□□□□□ -0.83
CLTCL1-209ENST00000617103 B3GALNT1O75752 331 aa9.88□□□□□ -0.83
CLTCL1-209ENST00000617103 C1SP09871 688 aa9.88□□□□□ -0.83
CLTCL1-209ENST00000617103 NTSR1P30989 418 aa9.88□□□□□ -0.83
CLTCL1-209ENST00000617103 ZNF266Q14584 549 aa9.88□□□□□ -0.83
CLTCL1-209ENST00000617103 HNRNPA1L2Q32P51 320 aaKnown RBP9.88□□□□□ -0.83
CLTCL1-209ENST00000617103 TOR2AQ5JU69 321 aa9.88□□□□□ -0.83
CLTCL1-209ENST00000617103 CLLU1OSQ5K130 101 aa9.88□□□□□ -0.83
CLTCL1-209ENST00000617103 HTR3DQ70Z44 454 aa9.88□□□□□ -0.83
CLTCL1-209ENST00000617103 SLC35D2Q76EJ3 337 aa9.88□□□□□ -0.83
CLTCL1-209ENST00000617103 VASH1Q7L8A9 365 aaPredicted RBP9.88□□□□□ -0.83
CLTCL1-209ENST00000617103 GDF7Q7Z4P5 450 aa9.88□□□□□ -0.83
CLTCL1-209ENST00000617103 TCTE3Q8IZS6 198 aa9.88□□□□□ -0.83
CLTCL1-209ENST00000617103 OR51S1Q8NGJ8 323 aa9.88□□□□□ -0.83
CLTCL1-209ENST00000617103 OR6M1Q8NGM8 313 aa9.88□□□□□ -0.83
CLTCL1-209ENST00000617103 ANGPTL6Q8NI99 470 aa9.88□□□□□ -0.83
CLTCL1-209ENST00000617103 LTB4R2Q9NPC1 389 aa9.88□□□□□ -0.83
CLTCL1-209ENST00000617103 ISYNA1Q9NPH2 558 aa9.88□□□□□ -0.83
CLTCL1-209ENST00000617103 MN1Q10571 1320 aaPredicted RBP9.88□□□□□ -0.83
CLTCL1-209ENST00000617103 LOC100289279A0A1B0GTE1 492 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms