RNA–Protein interactions for RNA: ENST00000615843.4

SPAST-203, Transcript of spastin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SPAST, Length 5,212 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-203ENST00000615843 NMNAT3Q96T66 252 aa17.5■□□□□ 0.39
SPAST-203ENST00000615843 DNAJC25-GNG10A0A024R161 153 aa17.5■□□□□ 0.39
SPAST-203ENST00000615843 ZAR1LA6NP61 321 aa17.5■□□□□ 0.39
SPAST-203ENST00000615843 EFCAB7A8K855 629 aa17.5■□□□□ 0.39
SPAST-203ENST00000615843 MCCD1P59942 119 aaPredicted RBP17.5■□□□□ 0.39
SPAST-203ENST00000615843 MPEG1Q2M385 716 aa17.5■□□□□ 0.39
SPAST-203ENST00000615843 MARCH8Q5T0T0 291 aa17.5■□□□□ 0.39
SPAST-203ENST00000615843 PARS2Q7L3T8 475 aaKnown RBP17.5■□□□□ 0.39
SPAST-203ENST00000615843 CHTF18Q8WVB6 975 aa17.5■□□□□ 0.39
SPAST-203ENST00000615843 HSFX1Q9UBD0 423 aa17.5■□□□□ 0.39
SPAST-203ENST00000615843 EVX1P49640 407 aa17.49■□□□□ 0.39
SPAST-203ENST00000615843 RAB31Q13636 194 aa17.49■□□□□ 0.39
SPAST-203ENST00000615843 FRMD1Q8N878 549 aa17.49■□□□□ 0.39
SPAST-203ENST00000615843 POFUT1Q9H488 388 aa17.49■□□□□ 0.39
SPAST-203ENST00000615843 C5P01031 1676 aa17.49■□□□□ 0.39
SPAST-203ENST00000615843 HBE1P02100 147 aa17.49■□□□□ 0.39
SPAST-203ENST00000615843 ZNF28P17035 718 aa17.49■□□□□ 0.39
SPAST-203ENST00000615843 ITGB7P26010 798 aa17.49■□□□□ 0.39
SPAST-203ENST00000615843 HHEXQ03014 270 aa17.49■□□□□ 0.39
SPAST-203ENST00000615843 TMPPEQ6ZT21 453 aa17.49■□□□□ 0.39
SPAST-203ENST00000615843 SLC35D2Q76EJ3 337 aa17.49■□□□□ 0.39
SPAST-203ENST00000615843 OR56B1Q8NGI3 324 aa17.49■□□□□ 0.39
SPAST-203ENST00000615843 OR52I2Q8NH67 350 aa17.49■□□□□ 0.39
SPAST-203ENST00000615843 SDSLQ96GA7 329 aa17.49■□□□□ 0.39
SPAST-203ENST00000615843 C12orf57Q99622 126 aa17.49■□□□□ 0.39
SPAST-203ENST00000615843 RHNO1Q9BSD3 238 aa17.49■□□□□ 0.39
SPAST-203ENST00000615843 MSTNO14793 375 aa17.49■□□□□ 0.39
SPAST-203ENST00000615843 CPT2P23786 658 aa17.49■□□□□ 0.39
SPAST-203ENST00000615843 PRDX1Q06830 199 aaKnown RBP17.49■□□□□ 0.39
SPAST-203ENST00000615843 KIR2DS3Q14952 304 aa17.49■□□□□ 0.39
SPAST-203ENST00000615843 Q6ZTK2 550 aa17.49■□□□□ 0.39
SPAST-203ENST00000615843 RAB3CQ96E17 227 aa17.49■□□□□ 0.39
SPAST-203ENST00000615843 SLC25A32Q9H2D1 315 aa17.49■□□□□ 0.39
SPAST-203ENST00000615843 CBLCQ9ULV8 474 aa17.49■□□□□ 0.39
SPAST-203ENST00000615843 TMEM41BQ5BJD5 291 aa17.49■□□□□ 0.39
SPAST-203ENST00000615843 MDGA2Q7Z553 956 aa17.49■□□□□ 0.39
SPAST-203ENST00000615843 ZNF761Q86XN6 746 aaPredicted RBP17.49■□□□□ 0.39
SPAST-203ENST00000615843 RBM45Q8IUH3 476 aaKnown RBP17.49■□□□□ 0.39
SPAST-203ENST00000615843 FAM3DQ96BQ1 224 aa17.49■□□□□ 0.39
SPAST-203ENST00000615843 CHST8Q9H2A9 424 aa17.49■□□□□ 0.39
SPAST-203ENST00000615843 LINC00597Q9H2U6 94 aa17.49■□□□□ 0.39
SPAST-203ENST00000615843 KPTNQ9Y664 436 aa17.49■□□□□ 0.39
SPAST-203ENST00000615843 LAMB4A4D0S4 1761 aa17.49■□□□□ 0.39
SPAST-203ENST00000615843 A0A087WZY1 265 aa17.48■□□□□ 0.39
SPAST-203ENST00000615843 AGAP14A8MT82 685 aa17.48■□□□□ 0.39
SPAST-203ENST00000615843 ZNF593O00488 134 aaPredicted RBP17.48■□□□□ 0.39
SPAST-203ENST00000615843 ALKBH1Q13686 389 aaKnown RBP17.48■□□□□ 0.39
SPAST-203ENST00000615843 ALKAL1Q6UXT8 129 aa17.48■□□□□ 0.39
SPAST-203ENST00000615843 RBMXL1Q96E39 390 aaKnown RBP17.48■□□□□ 0.39
SPAST-203ENST00000615843 NIPSNAP3BQ9BS92 247 aa17.48■□□□□ 0.39
SPAST-203ENST00000615843 PRR14Q9BWN1 585 aa17.48■□□□□ 0.39
SPAST-203ENST00000615843 ENTPD2Q9Y5L3 495 aa17.48■□□□□ 0.39
SPAST-203ENST00000615843 A0A0A6YYC8 382 aaPredicted RBP17.48■□□□□ 0.39
SPAST-203ENST00000615843 I3L1I5 382 aaPredicted RBP17.48■□□□□ 0.39
SPAST-203ENST00000615843 GPR75O95800 540 aa17.48■□□□□ 0.39
SPAST-203ENST00000615843 HNRNPA1P09651 372 aaKnown RBP eCLIP17.48■□□□□ 0.39
SPAST-203ENST00000615843 TMEM184AQ6ZMB5 413 aa17.48■□□□□ 0.39
SPAST-203ENST00000615843 CAPNS2Q96L46 248 aa17.48■□□□□ 0.39
SPAST-203ENST00000615843 C1QTNF3Q9BXJ4 246 aa17.48■□□□□ 0.39
SPAST-203ENST00000615843 TMEM200CA6NKL6 621 aa17.48■□□□□ 0.39
SPAST-203ENST00000615843 H7C1C5 153 aa17.48■□□□□ 0.39
SPAST-203ENST00000615843 PEX12O00623 359 aa17.48■□□□□ 0.39
SPAST-203ENST00000615843 TGM5O43548 720 aa17.48■□□□□ 0.39
SPAST-203ENST00000615843 OMGP23515 440 aa17.48■□□□□ 0.39
SPAST-203ENST00000615843 POLR2HP52434 150 aaKnown RBP17.48■□□□□ 0.39
SPAST-203ENST00000615843 RPS18P62269 152 aaKnown RBP17.48■□□□□ 0.39
SPAST-203ENST00000615843 LCN6P62502 163 aa17.48■□□□□ 0.39
SPAST-203ENST00000615843 CPXM2Q8N436 756 aa17.48■□□□□ 0.39
SPAST-203ENST00000615843 FAM160A2Q8N612 972 aaPredicted RBP17.48■□□□□ 0.39
SPAST-203ENST00000615843 OR13C9Q8NGT0 318 aa17.48■□□□□ 0.39
SPAST-203ENST00000615843 SPNS1Q9H2V7 528 aa17.48■□□□□ 0.39
SPAST-203ENST00000615843 ZNF768Q9H5H4 540 aaKnown RBP17.48■□□□□ 0.39
SPAST-203ENST00000615843 IKZF5Q9H5V7 419 aa17.48■□□□□ 0.39
SPAST-203ENST00000615843 GCM1Q9NP62 436 aa17.48■□□□□ 0.39
SPAST-203ENST00000615843 SERTAD4Q9NUC0 356 aa17.48■□□□□ 0.39
SPAST-203ENST00000615843 APOBEC3BQ9UH17 382 aaKnown RBP17.48■□□□□ 0.39
SPAST-203ENST00000615843 HEPACAM2A8MVW5 462 aa17.48■□□□□ 0.39
SPAST-203ENST00000615843 IGFBP1P08833 259 aaPredicted RBP17.48■□□□□ 0.39
SPAST-203ENST00000615843 TEAD1P28347 426 aa17.48■□□□□ 0.39
SPAST-203ENST00000615843 FAM71E1Q6IPT2 247 aa17.48■□□□□ 0.39
SPAST-203ENST00000615843 OVCH1Q7RTY7 1134 aa17.48■□□□□ 0.39
SPAST-203ENST00000615843 DPY19L4Q7Z388 723 aa17.48■□□□□ 0.39
SPAST-203ENST00000615843 VRK3Q8IV63 474 aa17.48■□□□□ 0.39
SPAST-203ENST00000615843 ZNF740Q8NDX6 193 aa17.48■□□□□ 0.39
SPAST-203ENST00000615843 TMEM59Q9BXS4 323 aa17.48■□□□□ 0.39
SPAST-203ENST00000615843 UFSP2Q9NUQ7 469 aa17.48■□□□□ 0.39
SPAST-203ENST00000615843 SAGE1Q9NXZ1 904 aa17.48■□□□□ 0.39
SPAST-203ENST00000615843 VDAC3Q9Y277 283 aa17.48■□□□□ 0.39
SPAST-203ENST00000615843 SEC14L5O43304 696 aa17.47■□□□□ 0.39
SPAST-203ENST00000615843 PER3P56645 1201 aa17.47■□□□□ 0.39
SPAST-203ENST00000615843 TAS2R30P59541 319 aa17.47■□□□□ 0.39
SPAST-203ENST00000615843 MRPS34P82930 218 aaKnown RBP17.47■□□□□ 0.39
SPAST-203ENST00000615843 ZBTB37Q5TC79 503 aa17.47■□□□□ 0.39
SPAST-203ENST00000615843 GLCCI1Q86VQ1 547 aa17.47■□□□□ 0.39
SPAST-203ENST00000615843 PRR18Q8N4B5 295 aa17.47■□□□□ 0.39
SPAST-203ENST00000615843 TM4SF18Q96CE8 201 aa17.47■□□□□ 0.39
SPAST-203ENST00000615843 GLIPR2Q9H4G4 154 aa17.47■□□□□ 0.39
SPAST-203ENST00000615843 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP17.47■□□□□ 0.391e-6■■■■■ 27.9
SPAST-203ENST00000615843 TLE4Q04727 773 aa17.47■□□□□ 0.39
SPAST-203ENST00000615843 CNN3Q15417 329 aaKnown RBP17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms