RNA–Protein interactions for RNA: ENST00000615061.4

CBWD3-211, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 1,771 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-211ENST00000615061 CDH24Q86UP0 819 aa14.75□□□□□ -0.05
CBWD3-211ENST00000615061 C10orf53Q8N6V4 93 aa14.75□□□□□ -0.05
CBWD3-211ENST00000615061 ZNF433Q8N7K0 673 aaPredicted RBP14.75□□□□□ -0.05
CBWD3-211ENST00000615061 CCDC197Q8NCU1 140 aa14.75□□□□□ -0.05
CBWD3-211ENST00000615061 STEAP2Q8NFT2 490 aa14.75□□□□□ -0.05
CBWD3-211ENST00000615061 TMEM45BQ96B21 275 aa14.75□□□□□ -0.05
CBWD3-211ENST00000615061 PIK3IP1Q96FE7 263 aa14.75□□□□□ -0.05
CBWD3-211ENST00000615061 ZNF426Q9BUY5 554 aa14.75□□□□□ -0.05
CBWD3-211ENST00000615061 ASB6Q9NWX5 421 aa14.75□□□□□ -0.05
CBWD3-211ENST00000615061 MALT1Q9UDY8 824 aa14.75□□□□□ -0.05
CBWD3-211ENST00000615061 RASD1Q9Y272 281 aa14.75□□□□□ -0.05
CBWD3-211ENST00000615061 MS4A18H0YCH9 400 aa14.75□□□□□ -0.05
CBWD3-211ENST00000615061 NDUFAB1O14561 156 aa14.75□□□□□ -0.05
CBWD3-211ENST00000615061 RAD51DO75771 328 aa14.75□□□□□ -0.05
CBWD3-211ENST00000615061 CNOT4O95628 575 aaKnown RBP14.75□□□□□ -0.05
CBWD3-211ENST00000615061 HPRP00739 348 aa14.75□□□□□ -0.05
CBWD3-211ENST00000615061 HLA-DOBP13765 273 aa14.75□□□□□ -0.05
CBWD3-211ENST00000615061 DNAJA1P31689 397 aaKnown RBP14.75□□□□□ -0.05
CBWD3-211ENST00000615061 YAP1P46937 504 aaKnown RBP14.75□□□□□ -0.05
CBWD3-211ENST00000615061 STK11Q15831 433 aa14.75□□□□□ -0.05
CBWD3-211ENST00000615061 MS4A18Q3C1V0 323 aa14.75□□□□□ -0.05
CBWD3-211ENST00000615061 H1FNTQ75WM6 255 aaPredicted RBP14.75□□□□□ -0.05
CBWD3-211ENST00000615061 PGAM4Q8N0Y7 254 aa14.75□□□□□ -0.05
CBWD3-211ENST00000615061 TMEM255BQ8WV15 326 aa14.75□□□□□ -0.05
CBWD3-211ENST00000615061 FAM162AQ96A26 154 aa14.75□□□□□ -0.05
CBWD3-211ENST00000615061 HDHD5Q9BXW7 423 aa14.75□□□□□ -0.05
CBWD3-211ENST00000615061 AMBRA1Q9C0C7 1298 aa14.75□□□□□ -0.05
CBWD3-211ENST00000615061 PARPBPQ9NWS1 579 aa14.75□□□□□ -0.05
CBWD3-211ENST00000615061 RIMS3Q9UJD0 308 aa14.75□□□□□ -0.05
CBWD3-211ENST00000615061 B3GALT5Q9Y2C3 310 aa14.75□□□□□ -0.05
CBWD3-211ENST00000615061 ZNF469Q96JG9 3925 aaPredicted RBP14.75□□□□□ -0.05
CBWD3-211ENST00000615061 PRRC2AP48634 2157 aaKnown RBP14.75□□□□□ -0.05
CBWD3-211ENST00000615061 J3KTA2 159 aa14.74□□□□□ -0.05
CBWD3-211ENST00000615061 KLF4O43474 513 aa14.74□□□□□ -0.05
CBWD3-211ENST00000615061 ITGA5P08648 1049 aa14.74□□□□□ -0.05
CBWD3-211ENST00000615061 NQO1P15559 274 aaKnown RBP14.74□□□□□ -0.05
CBWD3-211ENST00000615061 PPP3CBP16298 524 aa14.74□□□□□ -0.05
CBWD3-211ENST00000615061 LOXP28300 417 aaPredicted RBP14.74□□□□□ -0.05
CBWD3-211ENST00000615061 IL1RL1Q01638 556 aa14.74□□□□□ -0.05
CBWD3-211ENST00000615061 TTC33Q6PID6 262 aaPredicted RBP14.74□□□□□ -0.05
CBWD3-211ENST00000615061 LRRC17Q8N6Y2 441 aa14.74□□□□□ -0.05
CBWD3-211ENST00000615061 OR6S1Q8NH40 331 aa14.74□□□□□ -0.05
CBWD3-211ENST00000615061 LZICQ8WZA0 190 aa14.74□□□□□ -0.05
CBWD3-211ENST00000615061 MPP4Q96JB8 637 aa14.74□□□□□ -0.05
CBWD3-211ENST00000615061 HSH2DQ96JZ2 352 aa14.74□□□□□ -0.05
CBWD3-211ENST00000615061 CDRT15Q96T59 188 aa14.74□□□□□ -0.05
CBWD3-211ENST00000615061 PLEKHF2Q9H8W4 249 aa14.74□□□□□ -0.05
CBWD3-211ENST00000615061 MEPEQ9NQ76 525 aaPredicted RBP14.74□□□□□ -0.05
CBWD3-211ENST00000615061 A4GNTQ9UNA3 340 aa14.74□□□□□ -0.05
CBWD3-211ENST00000615061 DSCAMO60469 2012 aa14.74□□□□□ -0.05
CBWD3-211ENST00000615061 F8P00451 2351 aa14.74□□□□□ -0.05
CBWD3-211ENST00000615061 HIVEP1P15822 2718 aa14.73□□□□□ -0.05
CBWD3-211ENST00000615061 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP14.73□□□□□ -0.05
CBWD3-211ENST00000615061 PDLIM1O00151 329 aa14.73□□□□□ -0.05
CBWD3-211ENST00000615061 OR5F1O95221 314 aa14.73□□□□□ -0.05
CBWD3-211ENST00000615061 CH25HO95992 272 aa14.73□□□□□ -0.05
CBWD3-211ENST00000615061 ZNF43P17038 809 aa14.73□□□□□ -0.05
CBWD3-211ENST00000615061 UGT2B15P54855 530 aa14.73□□□□□ -0.05
CBWD3-211ENST00000615061 CLDN17P56750 224 aa14.73□□□□□ -0.05
CBWD3-211ENST00000615061 KRT72Q14CN4 511 aa14.73□□□□□ -0.05
CBWD3-211ENST00000615061 ZNF74Q16587 644 aa14.73□□□□□ -0.05
CBWD3-211ENST00000615061 GLYATQ6IB77 296 aa14.73□□□□□ -0.05
CBWD3-211ENST00000615061 NIPAL3Q6P499 406 aa14.73□□□□□ -0.05
CBWD3-211ENST00000615061 DEFB107AQ8IZN7 70 aa14.73□□□□□ -0.05
CBWD3-211ENST00000615061 PFN4Q8NHR9 129 aa14.73□□□□□ -0.05
CBWD3-211ENST00000615061 OXGR1Q96P68 337 aa14.73□□□□□ -0.05
CBWD3-211ENST00000615061 OR10A4Q9H209 315 aa14.73□□□□□ -0.05
CBWD3-211ENST00000615061 SLCO5A1Q9H2Y9 848 aa14.73□□□□□ -0.05
CBWD3-211ENST00000615061 RHCGQ9UBD6 479 aa14.73□□□□□ -0.05
CBWD3-211ENST00000615061 UPB1Q9UBR1 384 aa14.73□□□□□ -0.05
CBWD3-211ENST00000615061 LSM11P83369 360 aaKnown RBP eCLIP14.73□□□□□ -0.05
CBWD3-211ENST00000615061 MXRA7P84157 204 aa14.73□□□□□ -0.05
CBWD3-211ENST00000615061 PMS2P3Q13401 168 aa14.73□□□□□ -0.05
CBWD3-211ENST00000615061 MFSD13AQ14CX5 517 aa14.73□□□□□ -0.05
CBWD3-211ENST00000615061 SEZ6L2Q6UXD5 910 aa14.73□□□□□ -0.05
CBWD3-211ENST00000615061 FKBP9P1Q75LS8 142 aa14.73□□□□□ -0.05
CBWD3-211ENST00000615061 WDFY1Q8IWB7 410 aa14.73□□□□□ -0.05
CBWD3-211ENST00000615061 FAM86B1Q8N7N1 296 aa14.73□□□□□ -0.05
CBWD3-211ENST00000615061 ALKBH3Q96Q83 286 aaPredicted RBP14.73□□□□□ -0.05
CBWD3-211ENST00000615061 ASPNQ9BXN1 380 aa14.73□□□□□ -0.05
CBWD3-211ENST00000615061 CD300AQ9UGN4 299 aa14.73□□□□□ -0.05
CBWD3-211ENST00000615061 ITGB1BP2Q9UKP3 347 aa14.73□□□□□ -0.05
CBWD3-211ENST00000615061 CORINQ9Y5Q5 1042 aa14.73□□□□□ -0.05
CBWD3-211ENST00000615061 USF3Q68DE3 2245 aa14.72□□□□□ -0.05
CBWD3-211ENST00000615061 A0A1W2PR80 420 aa14.72□□□□□ -0.05
CBWD3-211ENST00000615061 FFAR1O14842 300 aa14.72□□□□□ -0.05
CBWD3-211ENST00000615061 TRAF3IP2O43734 574 aaPredicted RBP14.72□□□□□ -0.05
CBWD3-211ENST00000615061 UPK3AO75631 287 aa14.72□□□□□ -0.05
CBWD3-211ENST00000615061 SERPINI2O75830 405 aa14.72□□□□□ -0.05
CBWD3-211ENST00000615061 IFNW1P05000 195 aa14.72□□□□□ -0.05
CBWD3-211ENST00000615061 POU3F1Q03052 451 aaPredicted RBP14.72□□□□□ -0.05
CBWD3-211ENST00000615061 C1DQ13901 141 aaKnown RBP14.72□□□□□ -0.05
CBWD3-211ENST00000615061 IFI44LQ53G44 452 aa14.72□□□□□ -0.05
CBWD3-211ENST00000615061 LINGO2Q7L985 606 aa14.72□□□□□ -0.05
CBWD3-211ENST00000615061 TSEN54Q7Z6J9 526 aaKnown RBP14.72□□□□□ -0.05
CBWD3-211ENST00000615061 PIAS4Q8N2W9 510 aaPredicted RBP14.72□□□□□ -0.05
CBWD3-211ENST00000615061 SCAIQ8N9R8 606 aa14.72□□□□□ -0.05
CBWD3-211ENST00000615061 ADPRHL1Q8NDY3 354 aa14.72□□□□□ -0.05
CBWD3-211ENST00000615061 GEMIN6Q8WXD5 167 aaKnown RBP14.72□□□□□ -0.05
CBWD3-211ENST00000615061 PLPPR2Q96GM1 343 aa14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms