RNA–Protein interactions for RNA: ENST00000612417.4

CDH1-213, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 2,068 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-213ENST00000612417 GFM1Q96RP9 751 aaKnown RBP13.43□□□□□ -0.26
CDH1-213ENST00000612417 DDOQ99489 341 aa13.43□□□□□ -0.26
CDH1-213ENST00000612417 CHRNA10Q9GZZ6 450 aa13.43□□□□□ -0.26
CDH1-213ENST00000612417 RPS6KB2Q9UBS0 482 aa13.43□□□□□ -0.26
CDH1-213ENST00000612417 DTX4Q9Y2E6 619 aa13.43□□□□□ -0.26
CDH1-213ENST00000612417 PATE3B3GLJ2 98 aa13.42□□□□□ -0.26
CDH1-213ENST00000612417 FLRT2O43155 660 aa13.42□□□□□ -0.26
CDH1-213ENST00000612417 SIGLEC6O43699 453 aa13.42□□□□□ -0.26
CDH1-213ENST00000612417 PRAMEF2O60811 474 aa13.42□□□□□ -0.26
CDH1-213ENST00000612417 CTNSO60931 367 aa13.42□□□□□ -0.26
CDH1-213ENST00000612417 CDC123O75794 336 aaPredicted RBP13.42□□□□□ -0.26
CDH1-213ENST00000612417 NSA2O95478 260 aaKnown RBP13.42□□□□□ -0.26
CDH1-213ENST00000612417 ATF1P18846 271 aa13.42□□□□□ -0.26
CDH1-213ENST00000612417 DIO1P49895 249 aa13.42□□□□□ -0.26
CDH1-213ENST00000612417 PITPNAQ00169 270 aa13.42□□□□□ -0.26
CDH1-213ENST00000612417 LPAL2Q16609 132 aa13.42□□□□□ -0.26
CDH1-213ENST00000612417 NTRK2Q16620 822 aa13.42□□□□□ -0.26
CDH1-213ENST00000612417 OVCH1Q7RTY7 1134 aa13.42□□□□□ -0.26
CDH1-213ENST00000612417 ZNF595Q8IYB9 648 aa13.42□□□□□ -0.26
CDH1-213ENST00000612417 CADM2Q8N3J6 435 aa13.42□□□□□ -0.26
CDH1-213ENST00000612417 OR2I1PQ8NGU4 316 aa13.42□□□□□ -0.26
CDH1-213ENST00000612417 RPS4Y2Q8TD47 263 aa13.42□□□□□ -0.26
CDH1-213ENST00000612417 YIPF5Q969M3 257 aa13.42□□□□□ -0.26
CDH1-213ENST00000612417 MRPL48Q96GC5 212 aaKnown RBP13.42□□□□□ -0.26
CDH1-213ENST00000612417 SCMH1Q96GD3 660 aa13.42□□□□□ -0.26
CDH1-213ENST00000612417 RBM18Q96H35 190 aaKnown RBP13.42□□□□□ -0.26
CDH1-213ENST00000612417 ZC3H10Q96K80 434 aaKnown RBP13.42□□□□□ -0.26
CDH1-213ENST00000612417 CMTM3Q96MX0 182 aa13.42□□□□□ -0.26
CDH1-213ENST00000612417 NUDT22Q9BRQ3 303 aa13.42□□□□□ -0.26
CDH1-213ENST00000612417 NMNAT2Q9BZQ4 307 aa13.42□□□□□ -0.26
CDH1-213ENST00000612417 Q9N2J8 555 aa13.42□□□□□ -0.26
CDH1-213ENST00000612417 FBXO4Q9UKT5 387 aa13.42□□□□□ -0.26
CDH1-213ENST00000612417 MRPS33Q9Y291 106 aaKnown RBP13.42□□□□□ -0.26
CDH1-213ENST00000612417 IER3IP1Q9Y5U9 82 aa13.42□□□□□ -0.26
CDH1-213ENST00000612417 LOC105371267A0A1B0GV96 52 aa13.41□□□□□ -0.26
CDH1-213ENST00000612417 ARHGEF9O43307 516 aa13.41□□□□□ -0.26
CDH1-213ENST00000612417 ZNF780AO75290 641 aaPredicted RBP13.41□□□□□ -0.26
CDH1-213ENST00000612417 ALX3O95076 343 aa13.41□□□□□ -0.26
CDH1-213ENST00000612417 EVI2BP34910 448 aa13.41□□□□□ -0.26
CDH1-213ENST00000612417 RPS4XP62701 263 aaKnown RBP13.41□□□□□ -0.26
CDH1-213ENST00000612417 HSF2Q03933 536 aa13.41□□□□□ -0.26
CDH1-213ENST00000612417 ERV3-1Q14264 604 aa13.41□□□□□ -0.26
CDH1-213ENST00000612417 PON3Q15166 354 aa13.41□□□□□ -0.26
CDH1-213ENST00000612417 SIGIRRQ6IA17 410 aa13.41□□□□□ -0.26
CDH1-213ENST00000612417 GUSBP11Q6P575 273 aa13.41□□□□□ -0.26
CDH1-213ENST00000612417 WDR74Q6RFH5 385 aaPredicted RBP13.41□□□□□ -0.26
CDH1-213ENST00000612417 UNQ9370/PRO34162Q6UXP9 181 aa13.41□□□□□ -0.26
CDH1-213ENST00000612417 KANSL1Q7Z3B3 1105 aa13.41□□□□□ -0.26
CDH1-213ENST00000612417 CARFQ8N187 725 aa13.41□□□□□ -0.26
CDH1-213ENST00000612417 EID2Q8N6I1 236 aa13.41□□□□□ -0.26
CDH1-213ENST00000612417 NPEPL1Q8NDH3 523 aa13.41□□□□□ -0.26
CDH1-213ENST00000612417 OR7G1Q8NGA0 311 aa13.41□□□□□ -0.26
CDH1-213ENST00000612417 OR6C4Q8NGE1 309 aa13.41□□□□□ -0.26
CDH1-213ENST00000612417 OR5H6Q8NGV6 325 aa13.41□□□□□ -0.26
CDH1-213ENST00000612417 ADAMTS18Q8TE60 1221 aa13.41□□□□□ -0.26
CDH1-213ENST00000612417 HSD17B8Q92506 261 aa13.41□□□□□ -0.26
CDH1-213ENST00000612417 ZNF578Q96N58 590 aaPredicted RBP13.41□□□□□ -0.26
CDH1-213ENST00000612417 GPX7Q96SL4 187 aaPredicted RBP13.41□□□□□ -0.26
CDH1-213ENST00000612417 SLC19A3Q9BZV2 496 aa13.41□□□□□ -0.26
CDH1-213ENST00000612417 DPAGT1Q9H3H5 408 aa13.41□□□□□ -0.26
CDH1-213ENST00000612417 NRIP3Q9NQ35 241 aa13.41□□□□□ -0.26
CDH1-213ENST00000612417 COPZ2Q9P299 210 aa13.41□□□□□ -0.26
CDH1-213ENST00000612417 SPATA2Q9UM82 520 aa13.41□□□□□ -0.26
CDH1-213ENST00000612417 CLDN16Q9Y5I7 305 aa13.41□□□□□ -0.26
CDH1-213ENST00000612417 NUBP2Q9Y5Y2 271 aa13.41□□□□□ -0.26
CDH1-213ENST00000612417 NUP210LQ5VU65 1888 aa13.41□□□□□ -0.26
CDH1-213ENST00000612417 A0A0A6YYJ9 748 aa13.41□□□□□ -0.26
CDH1-213ENST00000612417 HRKO00198 91 aa13.41□□□□□ -0.26
CDH1-213ENST00000612417 CTDSPLO15194 276 aa13.41□□□□□ -0.26
CDH1-213ENST00000612417 GPRIN2O60269 458 aa13.41□□□□□ -0.26
CDH1-213ENST00000612417 DHFRP00374 187 aa13.41□□□□□ -0.26
CDH1-213ENST00000612417 IGF2P01344 180 aa13.41□□□□□ -0.26
CDH1-213ENST00000612417 CT45A8P0DMV1 189 aa13.41□□□□□ -0.26
CDH1-213ENST00000612417 CT45A9P0DMV2 189 aa13.41□□□□□ -0.26
CDH1-213ENST00000612417 FOSL1P15407 271 aa13.41□□□□□ -0.26
CDH1-213ENST00000612417 ENPP1P22413 925 aa13.41□□□□□ -0.26
CDH1-213ENST00000612417 HCCSP53701 268 aa13.41□□□□□ -0.26
CDH1-213ENST00000612417 GALK2Q01415 458 aa13.41□□□□□ -0.26
CDH1-213ENST00000612417 STX4Q12846 297 aa13.41□□□□□ -0.26
CDH1-213ENST00000612417 IL10RAQ13651 578 aa13.41□□□□□ -0.26
CDH1-213ENST00000612417 CT45A2Q5DJT8 189 aa13.41□□□□□ -0.26
CDH1-213ENST00000612417 GHDCQ8N2G8 530 aa13.41□□□□□ -0.26
CDH1-213ENST00000612417 CEP76Q8TAP6 659 aa13.41□□□□□ -0.26
CDH1-213ENST00000612417 CCNL2Q96S94 520 aaPredicted RBP13.41□□□□□ -0.26
CDH1-213ENST00000612417 C7orf50Q9BRJ6 194 aaKnown RBP13.41□□□□□ -0.26
CDH1-213ENST00000612417 GHITMQ9H3K2 345 aa13.41□□□□□ -0.26
CDH1-213ENST00000612417 MRPL39Q9NYK5 338 aaKnown RBP13.41□□□□□ -0.26
CDH1-213ENST00000612417 GMEB2Q9UKD1 530 aa13.41□□□□□ -0.26
CDH1-213ENST00000612417 ATXN7L1Q9ULK2 861 aaPredicted RBP13.41□□□□□ -0.26
CDH1-213ENST00000612417 ZNF337Q9Y3M9 751 aa13.41□□□□□ -0.26
CDH1-213ENST00000612417 DMDP11532 3685 aa13.41□□□□□ -0.26
CDH1-213ENST00000612417 SPEGQ15772 3267 aa13.4□□□□□ -0.26
CDH1-213ENST00000612417 A0A1B0GVC2 190 aa13.4□□□□□ -0.26
CDH1-213ENST00000612417 SERINC4A6NH21 518 aa13.4□□□□□ -0.26
CDH1-213ENST00000612417 A6NIN4 97 aa13.4□□□□□ -0.26
CDH1-213ENST00000612417 YKT6O15498 198 aa13.4□□□□□ -0.26
CDH1-213ENST00000612417 GSTZ1O43708 216 aaPredicted RBP13.4□□□□□ -0.26
CDH1-213ENST00000612417 CPNE3O75131 537 aaKnown RBP13.4□□□□□ -0.26
CDH1-213ENST00000612417 TMEM127O75204 238 aa13.4□□□□□ -0.26
CDH1-213ENST00000612417 MRPL28Q13084 256 aaKnown RBP13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms