RNA–Protein interactions for RNA: ENST00000611712.4

LIG4-204, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 4 BASIC

Gene LIG4, Length 4,180 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-204ENST00000611712 TCTN2Q96GX1 697 aa7.98□□□□□ -1.13
LIG4-204ENST00000611712 TSSK2Q96PF2 358 aa7.98□□□□□ -1.13
LIG4-204ENST00000611712 ELF4Q99607 663 aaPredicted RBP7.98□□□□□ -1.13
LIG4-204ENST00000611712 SYT4Q9H2B2 425 aa7.98□□□□□ -1.13
LIG4-204ENST00000611712 LIN7BQ9HAP6 207 aa7.98□□□□□ -1.13
LIG4-204ENST00000611712 CD93Q9NPY3 652 aa7.98□□□□□ -1.13
LIG4-204ENST00000611712 SDHAF3Q9NRP4 125 aa7.98□□□□□ -1.13
LIG4-204ENST00000611712 CES1P1Q9UKY3 287 aa7.98□□□□□ -1.13
LIG4-204ENST00000611712 A0A0A6YYJ9 748 aa7.98□□□□□ -1.13
LIG4-204ENST00000611712 ARPC5O15511 151 aa7.98□□□□□ -1.13
LIG4-204ENST00000611712 SEMA7AO75326 666 aa7.98□□□□□ -1.13
LIG4-204ENST00000611712 RP2O75695 350 aa7.98□□□□□ -1.13
LIG4-204ENST00000611712 ALX3O95076 343 aa7.98□□□□□ -1.13
LIG4-204ENST00000611712 ZNF24P17028 368 aa7.98□□□□□ -1.13
LIG4-204ENST00000611712 SPI1P17947 270 aa7.98□□□□□ -1.13
LIG4-204ENST00000611712 HSD11B1P28845 292 aa7.98□□□□□ -1.13
LIG4-204ENST00000611712 VEGFCP49767 419 aa7.98□□□□□ -1.13
LIG4-204ENST00000611712 DIO1P49895 249 aa7.98□□□□□ -1.13
LIG4-204ENST00000611712 MRPS10P82664 201 aaKnown RBP7.98□□□□□ -1.13
LIG4-204ENST00000611712 LTBQ06643 244 aa7.98□□□□□ -1.13
LIG4-204ENST00000611712 Q499Y3 187 aa7.98□□□□□ -1.13
LIG4-204ENST00000611712 SMIM19Q96E16 107 aa7.98□□□□□ -1.13
LIG4-204ENST00000611712 HCAR1Q9BXC0 346 aa7.98□□□□□ -1.13
LIG4-204ENST00000611712 ELOVL3Q9HB03 270 aa7.98□□□□□ -1.13
LIG4-204ENST00000611712 SERINC1Q9NRX5 453 aa7.98□□□□□ -1.13
LIG4-204ENST00000611712 FAM221BA6H8Z2 402 aa7.98□□□□□ -1.13
LIG4-204ENST00000611712 GLCEO94923 617 aa7.98□□□□□ -1.13
LIG4-204ENST00000611712 SLC6A8P48029 635 aa7.98□□□□□ -1.13
LIG4-204ENST00000611712 ARFRP1Q13795 201 aa7.98□□□□□ -1.13
LIG4-204ENST00000611712 CCINQ13939 588 aa7.98□□□□□ -1.13
LIG4-204ENST00000611712 SHHQ15465 462 aa7.98□□□□□ -1.13
LIG4-204ENST00000611712 C9orf50Q5SZB4 431 aa7.98□□□□□ -1.13
LIG4-204ENST00000611712 LIPNQ5VXI9 398 aa7.98□□□□□ -1.13
LIG4-204ENST00000611712 KIAA0895LQ68EN5 471 aa7.98□□□□□ -1.13
LIG4-204ENST00000611712 GALNTL5Q7Z4T8 443 aa7.98□□□□□ -1.13
LIG4-204ENST00000611712 GPAT4Q86UL3 456 aa7.98□□□□□ -1.13
LIG4-204ENST00000611712 C17orf47Q8NEP4 570 aa7.98□□□□□ -1.13
LIG4-204ENST00000611712 OR7G1Q8NGA0 311 aa7.98□□□□□ -1.13
LIG4-204ENST00000611712 CASTOR1Q8WTX7 329 aa7.98□□□□□ -1.13
LIG4-204ENST00000611712 ERVMER34-1Q9H9K5 563 aa7.98□□□□□ -1.13
LIG4-204ENST00000611712 COQ3Q9NZJ6 369 aa7.98□□□□□ -1.13
LIG4-204ENST00000611712 GMEB2Q9UKD1 530 aa7.98□□□□□ -1.13
LIG4-204ENST00000611712 HTR2AP28223 471 aa7.97□□□□□ -1.13
LIG4-204ENST00000611712 PEBP1P30086 187 aaKnown RBP7.97□□□□□ -1.13
LIG4-204ENST00000611712 HNRNPKP61978 463 aaKnown RBP eCLIP7.97□□□□□ -1.13
LIG4-204ENST00000611712 RASGEF1BQ0VAM2 473 aa7.97□□□□□ -1.13
LIG4-204ENST00000611712 TIGD3Q6B0B8 471 aa7.97□□□□□ -1.13
LIG4-204ENST00000611712 GPR139Q6DWJ6 353 aa7.97□□□□□ -1.13
LIG4-204ENST00000611712 OR5M10Q6IEU7 315 aa7.97□□□□□ -1.13
LIG4-204ENST00000611712 OR7E24Q6IFN5 339 aa7.97□□□□□ -1.13
LIG4-204ENST00000611712 COMMD7Q86VX2 200 aa7.97□□□□□ -1.13
LIG4-204ENST00000611712 SLC43A2Q8N370 569 aa7.97□□□□□ -1.13
LIG4-204ENST00000611712 FAM109AQ8N4B1 249 aa7.97□□□□□ -1.13
LIG4-204ENST00000611712 C16orf52Q8NHV5 167 aa7.97□□□□□ -1.13
LIG4-204ENST00000611712 HAVCR2Q8TDQ0 301 aa7.97□□□□□ -1.13
LIG4-204ENST00000611712 NRSN2Q9GZP1 204 aa7.97□□□□□ -1.13
LIG4-204ENST00000611712 RNF32Q9H0A6 362 aa7.97□□□□□ -1.13
LIG4-204ENST00000611712 PLEKHA6Q9Y2H5 1048 aa7.97□□□□□ -1.13
LIG4-204ENST00000611712 SLC6A5Q9Y345 797 aa7.97□□□□□ -1.13
LIG4-204ENST00000611712 CENPVL1A0A0U1RR11 272 aa7.97□□□□□ -1.13
LIG4-204ENST00000611712 KANTRA0A1W2PQU2 76 aa7.97□□□□□ -1.13
LIG4-204ENST00000611712 ZNF726A6NNF4 738 aa7.97□□□□□ -1.13
LIG4-204ENST00000611712 C4orf51C9J302 202 aa7.97□□□□□ -1.13
LIG4-204ENST00000611712 TPD52L2O43399 206 aaKnown RBP7.97□□□□□ -1.13
LIG4-204ENST00000611712 TLX3O43711 291 aaPredicted RBP7.97□□□□□ -1.13
LIG4-204ENST00000611712 NARSO43776 548 aaKnown RBP7.97□□□□□ -1.13
LIG4-204ENST00000611712 EEF1A1P68104 462 aaKnown RBP7.97□□□□□ -1.13
LIG4-204ENST00000611712 ZP2Q05996 745 aa7.97□□□□□ -1.13
LIG4-204ENST00000611712 YIF1BQ5BJH7 314 aa7.97□□□□□ -1.13
LIG4-204ENST00000611712 ZNF584Q8IVC4 421 aa7.97□□□□□ -1.13
LIG4-204ENST00000611712 TCTE3Q8IZS6 198 aa7.97□□□□□ -1.13
LIG4-204ENST00000611712 SYS1Q8N2H4 156 aa7.97□□□□□ -1.13
LIG4-204ENST00000611712 OR13C3Q8NGS6 347 aa7.97□□□□□ -1.13
LIG4-204ENST00000611712 UPRTQ96BW1 309 aa7.97□□□□□ -1.13
LIG4-204ENST00000611712 DERL3Q96Q80 235 aa7.97□□□□□ -1.13
LIG4-204ENST00000611712 TCEAL2Q9H3H9 227 aaPredicted RBP7.97□□□□□ -1.13
LIG4-204ENST00000611712 METTL7AQ9H8H3 244 aa7.97□□□□□ -1.13
LIG4-204ENST00000611712 MRPS18AQ9NVS2 196 aaKnown RBP7.97□□□□□ -1.13
LIG4-204ENST00000611712 MOKQ9UQ07 419 aa7.97□□□□□ -1.13
LIG4-204ENST00000611712 HS3ST3A1Q9Y663 406 aa7.97□□□□□ -1.13
LIG4-204ENST00000611712 SCN5AQ14524 2016 aa7.97□□□□□ -1.13
LIG4-204ENST00000611712 A0A0B4J2E0 115 aa7.97□□□□□ -1.13
LIG4-204ENST00000611712 A0A1B0GX12 115 aa7.97□□□□□ -1.13
LIG4-204ENST00000611712 ZNF780AO75290 641 aaPredicted RBP7.97□□□□□ -1.13
LIG4-204ENST00000611712 TSPAN9O75954 239 aa7.97□□□□□ -1.13
LIG4-204ENST00000611712 UTS2O95399 124 aa7.97□□□□□ -1.13
LIG4-204ENST00000611712 CRYZL1O95825 349 aa7.97□□□□□ -1.13
LIG4-204ENST00000611712 AMY2AP04746 511 aa7.97□□□□□ -1.13
LIG4-204ENST00000611712 CT62P0C5K7 136 aa7.97□□□□□ -1.13
LIG4-204ENST00000611712 EPXP11678 715 aa7.97□□□□□ -1.13
LIG4-204ENST00000611712 RPS27P42677 84 aaKnown RBP7.97□□□□□ -1.13
LIG4-204ENST00000611712 FNTBP49356 437 aa7.97□□□□□ -1.13
LIG4-204ENST00000611712 OC90Q02509 493 aaPredicted RBP7.97□□□□□ -1.13
LIG4-204ENST00000611712 ALKBH1Q13686 389 aaKnown RBP7.97□□□□□ -1.13
LIG4-204ENST00000611712 EIF2B1Q14232 305 aaKnown RBP7.97□□□□□ -1.13
LIG4-204ENST00000611712 CD276Q5ZPR3 534 aa7.97□□□□□ -1.13
LIG4-204ENST00000611712 FAM198BQ6UWH4 519 aa7.97□□□□□ -1.13
LIG4-204ENST00000611712 OVCH1Q7RTY7 1134 aa7.97□□□□□ -1.13
LIG4-204ENST00000611712 CMIPQ8IY22 773 aa7.97□□□□□ -1.13
LIG4-204ENST00000611712 BCORP1Q8N888 145 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms