RNA–Protein interactions for RNA: ENST00000611132.4

VPS36-207, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 1 (best) BASIC

Gene VPS36, Length 4,607 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-207ENST00000611132 FAM83CQ9BQN1 747 aa13.53□□□□□ -0.24
VPS36-207ENST00000611132 UNKLQ9H9P5 680 aaKnown RBP13.53□□□□□ -0.24
VPS36-207ENST00000611132 KCNJ16Q9NPI9 418 aa13.53□□□□□ -0.24
VPS36-207ENST00000611132 IL20Q9NYY1 176 aa13.53□□□□□ -0.24
VPS36-207ENST00000611132 STEAP1Q9UHE8 339 aa13.53□□□□□ -0.24
VPS36-207ENST00000611132 A0A0B4J2A0 478 aa13.52□□□□□ -0.24
VPS36-207ENST00000611132 A0A1W2PR48 441 aa13.52□□□□□ -0.24
VPS36-207ENST00000611132 RRASP10301 218 aa13.52□□□□□ -0.24
VPS36-207ENST00000611132 CST5P28325 142 aaPredicted RBP13.52□□□□□ -0.24
VPS36-207ENST00000611132 VIPR2P41587 438 aa13.52□□□□□ -0.24
VPS36-207ENST00000611132 EIF4EBP2Q13542 120 aaPredicted RBP13.52□□□□□ -0.24
VPS36-207ENST00000611132 EIF2B1Q14232 305 aaKnown RBP13.52□□□□□ -0.24
VPS36-207ENST00000611132 CDK5R1Q15078 307 aa13.52□□□□□ -0.24
VPS36-207ENST00000611132 SYS1Q8N2H4 156 aa13.52□□□□□ -0.24
VPS36-207ENST00000611132 ZNF283Q8N7M2 679 aa13.52□□□□□ -0.24
VPS36-207ENST00000611132 CLRN3Q8NCR9 226 aa13.52□□□□□ -0.24
VPS36-207ENST00000611132 PEX11GQ96HA9 241 aa13.52□□□□□ -0.24
VPS36-207ENST00000611132 LMF2Q9BU23 707 aaKnown RBP13.52□□□□□ -0.24
VPS36-207ENST00000611132 SLC17A9Q9BYT1 436 aa13.52□□□□□ -0.24
VPS36-207ENST00000611132 FZD3Q9NPG1 666 aa13.52□□□□□ -0.24
VPS36-207ENST00000611132 SHPKQ9UHJ6 478 aa13.52□□□□□ -0.24
VPS36-207ENST00000611132 MOKQ9UQ07 419 aa13.52□□□□□ -0.24
VPS36-207ENST00000611132 SNRNP70P08621 437 aaKnown RBP13.52□□□□□ -0.24
VPS36-207ENST00000611132 SLC2A5P22732 501 aa13.52□□□□□ -0.24
VPS36-207ENST00000611132 GDI1P31150 447 aa13.52□□□□□ -0.24
VPS36-207ENST00000611132 BAMBIQ13145 260 aa13.52□□□□□ -0.24
VPS36-207ENST00000611132 METTL27Q8N6F8 245 aaPredicted RBP13.52□□□□□ -0.24
VPS36-207ENST00000611132 OR2AK2Q8NG84 335 aa13.52□□□□□ -0.24
VPS36-207ENST00000611132 OR4Q3Q8NH05 313 aa13.52□□□□□ -0.24
VPS36-207ENST00000611132 TMEM234Q8WY98 164 aa13.52□□□□□ -0.24
VPS36-207ENST00000611132 KCND3Q9UK17 655 aa13.52□□□□□ -0.24
VPS36-207ENST00000611132 GIMAP1-GIMAP5A0A087WTJ2 511 aa13.52□□□□□ -0.25
VPS36-207ENST00000611132 A0A1B0GV50 99 aa13.52□□□□□ -0.25
VPS36-207ENST00000611132 PRSS44E7EML9 344 aa13.52□□□□□ -0.25
VPS36-207ENST00000611132 NPIPB8E9PQR5 432 aa13.52□□□□□ -0.25
VPS36-207ENST00000611132 UBE2MP61081 183 aaKnown RBP13.52□□□□□ -0.25
VPS36-207ENST00000611132 SPOCK1Q08629 439 aa13.52□□□□□ -0.25
VPS36-207ENST00000611132 GSG1Q2KHT4 349 aa13.52□□□□□ -0.25
VPS36-207ENST00000611132 C12orf40Q86WS4 652 aa13.52□□□□□ -0.25
VPS36-207ENST00000611132 CDH26Q8IXH8 852 aa13.52□□□□□ -0.25
VPS36-207ENST00000611132 GIMAP5Q96F15 307 aa13.52□□□□□ -0.25
VPS36-207ENST00000611132 ABHD1Q96SE0 405 aa13.52□□□□□ -0.25
VPS36-207ENST00000611132 TRAV1-2A0A0B4J238 106 aa13.52□□□□□ -0.25
VPS36-207ENST00000611132 MAGEB4O15481 346 aaPredicted RBP13.52□□□□□ -0.25
VPS36-207ENST00000611132 SELENOFO60613 162 aa13.52□□□□□ -0.25
VPS36-207ENST00000611132 MPIG6BO95866 241 aa13.52□□□□□ -0.25
VPS36-207ENST00000611132 F3P13726 295 aa13.52□□□□□ -0.25
VPS36-207ENST00000611132 BCL6P41182 706 aa13.52□□□□□ -0.25
VPS36-207ENST00000611132 POU3F4P49335 361 aa13.52□□□□□ -0.25
VPS36-207ENST00000611132 HCCSP53701 268 aa13.52□□□□□ -0.25
VPS36-207ENST00000611132 HERV-K104P61576 105 aa13.52□□□□□ -0.25
VPS36-207ENST00000611132 SQSTM1Q13501 440 aa13.52□□□□□ -0.25
VPS36-207ENST00000611132 YOD1Q5VVQ6 348 aaPredicted RBP13.52□□□□□ -0.25
VPS36-207ENST00000611132 LPCAT3Q6P1A2 487 aa13.52□□□□□ -0.25
VPS36-207ENST00000611132 ESX1Q8N693 406 aa13.52□□□□□ -0.25
VPS36-207ENST00000611132 SLC35A4Q96G79 324 aa13.52□□□□□ -0.25
VPS36-207ENST00000611132 M0QYG6 137 aa13.51□□□□□ -0.25
VPS36-207ENST00000611132 KNG1P01042 644 aa13.51□□□□□ -0.25
VPS36-207ENST00000611132 F13BP05160 661 aa13.51□□□□□ -0.25
VPS36-207ENST00000611132 VASNQ6EMK4 673 aa13.51□□□□□ -0.25
VPS36-207ENST00000611132 CD300LGQ6UXG3 332 aa13.51□□□□□ -0.25
VPS36-207ENST00000611132 DPY19L2P2Q6ZN68 376 aa13.51□□□□□ -0.25
VPS36-207ENST00000611132 ACBD4Q8NC06 268 aa13.51□□□□□ -0.25
VPS36-207ENST00000611132 GCDHQ92947 438 aaPredicted RBP13.51□□□□□ -0.25
VPS36-207ENST00000611132 SLCO5A1Q9H2Y9 848 aa13.51□□□□□ -0.25
VPS36-207ENST00000611132 KCMF1Q9P0J7 381 aa13.51□□□□□ -0.25
VPS36-207ENST00000611132 KLK11Q9UBX7 282 aa13.51□□□□□ -0.25
VPS36-207ENST00000611132 MAN2B1O00754 1011 aa13.51□□□□□ -0.25
VPS36-207ENST00000611132 SHOXO15266 292 aa13.51□□□□□ -0.25
VPS36-207ENST00000611132 SYT7O43581 403 aa13.51□□□□□ -0.25
VPS36-207ENST00000611132 OR8U9P0C7N5 309 aa13.51□□□□□ -0.25
VPS36-207ENST00000611132 NID1P14543 1247 aa13.51□□□□□ -0.25
VPS36-207ENST00000611132 SNTB1Q13884 538 aaKnown RBP13.51□□□□□ -0.25
VPS36-207ENST00000611132 KIR2DS3Q14952 304 aa13.51□□□□□ -0.25
VPS36-207ENST00000611132 DUSP5Q16690 384 aa13.51□□□□□ -0.25
VPS36-207ENST00000611132 DPY19L4Q7Z388 723 aa13.51□□□□□ -0.25
VPS36-207ENST00000611132 OR5T3Q8NGG3 340 aa13.51□□□□□ -0.25
VPS36-207ENST00000611132 FAM3DQ96BQ1 224 aa13.51□□□□□ -0.25
VPS36-207ENST00000611132 C10orf90Q96M02 699 aa13.51□□□□□ -0.25
VPS36-207ENST00000611132 DERL3Q96Q80 235 aa13.51□□□□□ -0.25
VPS36-207ENST00000611132 TIMM29Q9BSF4 260 aa13.51□□□□□ -0.25
VPS36-207ENST00000611132 IL21RQ9HBE5 538 aa13.51□□□□□ -0.25
VPS36-207ENST00000611132 MED6O75586 246 aa13.51□□□□□ -0.25
VPS36-207ENST00000611132 OR2F2O95006 317 aa13.51□□□□□ -0.25
VPS36-207ENST00000611132 DCTDP32321 178 aa13.51□□□□□ -0.25
VPS36-207ENST00000611132 PXNP49023 591 aaPredicted RBP13.51□□□□□ -0.25
VPS36-207ENST00000611132 MAP2K6P52564 334 aa13.51□□□□□ -0.25
VPS36-207ENST00000611132 CSNK2A1P68400 391 aaPredicted RBP13.51□□□□□ -0.25
VPS36-207ENST00000611132 OR2F1Q13607 317 aa13.51□□□□□ -0.25
VPS36-207ENST00000611132 SPIN3Q5JUX0 258 aa13.51□□□□□ -0.25
VPS36-207ENST00000611132 SLC35D3Q5M8T2 416 aa13.51□□□□□ -0.25
VPS36-207ENST00000611132 OR7E24Q6IFN5 339 aa13.51□□□□□ -0.25
VPS36-207ENST00000611132 PLPP6Q8IY26 295 aa13.51□□□□□ -0.25
VPS36-207ENST00000611132 FAM71CQ8NEG0 241 aa13.51□□□□□ -0.25
VPS36-207ENST00000611132 CSNK2A3Q8NEV1 391 aa13.51□□□□□ -0.25
VPS36-207ENST00000611132 ARRDC3Q96B67 414 aa13.51□□□□□ -0.25
VPS36-207ENST00000611132 ZBTB32Q9Y2Y4 487 aaPredicted RBP13.51□□□□□ -0.25
VPS36-207ENST00000611132 FFAR1O14842 300 aa13.51□□□□□ -0.25
VPS36-207ENST00000611132 WNT1P04628 370 aa13.51□□□□□ -0.25
VPS36-207ENST00000611132 THBS1P07996 1170 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms