RNA–Protein interactions for RNA: ENST00000610556.4

SYNPO2-206, Transcript of synaptopodin 2, humanhuman

TSL 1 (best) BASIC

Gene SYNPO2, Length 3,934 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-206ENST00000610556 RSC1A1Q92681 617 aa6.31□□□□□ -1.4
SYNPO2-206ENST00000610556 KLHL15Q96M94 604 aa6.31□□□□□ -1.4
SYNPO2-206ENST00000610556 INTS14Q96SY0 518 aa6.31□□□□□ -1.4
SYNPO2-206ENST00000610556 MICU1Q9BPX6 476 aa6.31□□□□□ -1.4
SYNPO2-206ENST00000610556 MARVELD1Q9BSK0 173 aa6.31□□□□□ -1.4
SYNPO2-206ENST00000610556 POTEKPQ9BYX7 375 aa6.31□□□□□ -1.4
SYNPO2-206ENST00000610556 ELOVL3Q9HB03 270 aa6.31□□□□□ -1.4
SYNPO2-206ENST00000610556 POLMQ9NP87 494 aaPredicted RBP6.31□□□□□ -1.4
SYNPO2-206ENST00000610556 EMC7Q9NPA0 242 aa6.31□□□□□ -1.4
SYNPO2-206ENST00000610556 OR2S2Q9NQN1 319 aa6.31□□□□□ -1.4
SYNPO2-206ENST00000610556 GSKIPQ9P0R6 139 aa6.31□□□□□ -1.4
SYNPO2-206ENST00000610556 SIGLEC7Q9Y286 467 aa6.31□□□□□ -1.4
SYNPO2-206ENST00000610556 MYLKQ15746 1914 aa6.31□□□□□ -1.4
SYNPO2-206ENST00000610556 F5H5P2 479 aa6.31□□□□□ -1.4
SYNPO2-206ENST00000610556 GPRIN2O60269 458 aa6.31□□□□□ -1.4
SYNPO2-206ENST00000610556 TBX19O60806 448 aa6.31□□□□□ -1.4
SYNPO2-206ENST00000610556 DNAJB6O75190 326 aa6.31□□□□□ -1.4
SYNPO2-206ENST00000610556 THBS1P07996 1170 aa6.31□□□□□ -1.4
SYNPO2-206ENST00000610556 UBL4AP11441 157 aa6.31□□□□□ -1.4
SYNPO2-206ENST00000610556 EPXP11678 715 aa6.31□□□□□ -1.4
SYNPO2-206ENST00000610556 PGAM2P15259 253 aa6.31□□□□□ -1.4
SYNPO2-206ENST00000610556 AKR1C4P17516 323 aa6.31□□□□□ -1.4
SYNPO2-206ENST00000610556 CXCL3P19876 107 aa6.31□□□□□ -1.4
SYNPO2-206ENST00000610556 ITGA3P26006 1051 aa6.31□□□□□ -1.4
SYNPO2-206ENST00000610556 DCTDP32321 178 aa6.31□□□□□ -1.4
SYNPO2-206ENST00000610556 OR3A2P47893 321 aa6.31□□□□□ -1.4
SYNPO2-206ENST00000610556 CCR9P51686 369 aa6.31□□□□□ -1.4
SYNPO2-206ENST00000610556 PRKXP51817 358 aa6.31□□□□□ -1.4
SYNPO2-206ENST00000610556 SORDQ00796 357 aa6.31□□□□□ -1.4
SYNPO2-206ENST00000610556 EIF2B5Q13144 721 aaKnown RBP6.31□□□□□ -1.4
SYNPO2-206ENST00000610556 MLC1Q15049 377 aa6.31□□□□□ -1.4
SYNPO2-206ENST00000610556 BCL2A1Q16548 175 aa6.31□□□□□ -1.4
SYNPO2-206ENST00000610556 COL28A1Q2UY09 1125 aa6.31□□□□□ -1.4
SYNPO2-206ENST00000610556 HEPHL1Q6MZM0 1159 aa6.31□□□□□ -1.4
SYNPO2-206ENST00000610556 FBXO42Q6P3S6 717 aa6.31□□□□□ -1.4
SYNPO2-206ENST00000610556 KIRREL2Q6UWL6 708 aa6.31□□□□□ -1.4
SYNPO2-206ENST00000610556 TMEM151BQ8IW70 566 aa6.31□□□□□ -1.4
SYNPO2-206ENST00000610556 PDZD9Q8IXQ8 264 aa6.31□□□□□ -1.4
SYNPO2-206ENST00000610556 KDM8Q8N371 416 aa6.31□□□□□ -1.4
SYNPO2-206ENST00000610556 SEC22AQ96IW7 307 aa6.31□□□□□ -1.4
SYNPO2-206ENST00000610556 SFXN2Q96NB2 322 aa6.31□□□□□ -1.4
SYNPO2-206ENST00000610556 MYADMQ96S97 322 aa6.31□□□□□ -1.4
SYNPO2-206ENST00000610556 RPP25Q9BUL9 199 aaKnown RBP6.31□□□□□ -1.4
SYNPO2-206ENST00000610556 ZNF436Q9C0F3 470 aaPredicted RBP6.31□□□□□ -1.4
SYNPO2-206ENST00000610556 SLC22A7Q9Y694 548 aa6.31□□□□□ -1.4
SYNPO2-206ENST00000610556 DSPPQ9NZW4 1301 aa6.31□□□□□ -1.4
SYNPO2-206ENST00000610556 RP1P56715 2156 aa6.31□□□□□ -1.4
SYNPO2-206ENST00000610556 IGKV1-8A0A0C4DH67 115 aa6.31□□□□□ -1.4
SYNPO2-206ENST00000610556 SERINC4A6NH21 518 aa6.31□□□□□ -1.4
SYNPO2-206ENST00000610556 PRAF2O60831 178 aa6.31□□□□□ -1.4
SYNPO2-206ENST00000610556 SC5DO75845 299 aa6.31□□□□□ -1.4
SYNPO2-206ENST00000610556 EML2O95834 649 aa6.31□□□□□ -1.4
SYNPO2-206ENST00000610556 RAF1P04049 648 aa6.31□□□□□ -1.4
SYNPO2-206ENST00000610556 ZNF20P17024 532 aa6.31□□□□□ -1.4
SYNPO2-206ENST00000610556 ENDOUP21128 410 aaKnown RBP6.31□□□□□ -1.4
SYNPO2-206ENST00000610556 HOXD11P31277 338 aaPredicted RBP6.31□□□□□ -1.4
SYNPO2-206ENST00000610556 ARHGDIBP52566 201 aa6.31□□□□□ -1.4
SYNPO2-206ENST00000610556 RIDAP52758 137 aaKnown RBP6.31□□□□□ -1.4
SYNPO2-206ENST00000610556 DLX5P56178 289 aa6.31□□□□□ -1.4
SYNPO2-206ENST00000610556 BTG2P78543 158 aa6.31□□□□□ -1.4
SYNPO2-206ENST00000610556 SCRN3Q0VDG4 424 aa6.31□□□□□ -1.4
SYNPO2-206ENST00000610556 FUT5Q11128 374 aa6.31□□□□□ -1.4
SYNPO2-206ENST00000610556 CDK5R1Q15078 307 aa6.31□□□□□ -1.4
SYNPO2-206ENST00000610556 TIGD3Q6B0B8 471 aa6.31□□□□□ -1.4
SYNPO2-206ENST00000610556 TMEM184AQ6ZMB5 413 aa6.31□□□□□ -1.4
SYNPO2-206ENST00000610556 BTN2A1Q7KYR7 527 aa6.31□□□□□ -1.4
SYNPO2-206ENST00000610556 SLC37A2Q8TED4 501 aa6.31□□□□□ -1.4
SYNPO2-206ENST00000610556 PTP4A1Q93096 173 aa6.31□□□□□ -1.4
SYNPO2-206ENST00000610556 COX14Q96I36 57 aa6.31□□□□□ -1.4
SYNPO2-206ENST00000610556 HHIPL1Q96JK4 782 aa6.31□□□□□ -1.4
SYNPO2-206ENST00000610556 PPP1R3EQ9H7J1 279 aa6.31□□□□□ -1.4
SYNPO2-206ENST00000610556 ERVMER34-1Q9H9K5 563 aa6.31□□□□□ -1.4
SYNPO2-206ENST00000610556 PDE7BQ9NP56 450 aa6.31□□□□□ -1.4
SYNPO2-206ENST00000610556 B3GNT2Q9NY97 397 aa6.31□□□□□ -1.4
SYNPO2-206ENST00000610556 EPHA6Q9UF33 1036 aa6.31□□□□□ -1.4
SYNPO2-206ENST00000610556 ZNF346Q9UL40 294 aaKnown RBP6.31□□□□□ -1.4
SYNPO2-206ENST00000610556 ENTPD2Q9Y5L3 495 aa6.31□□□□□ -1.4
SYNPO2-206ENST00000610556 CHD5Q8TDI0 1954 aa6.31□□□□□ -1.4
SYNPO2-206ENST00000610556 GPR171O14626 319 aa6.31□□□□□ -1.4
SYNPO2-206ENST00000610556 PRICKLE3O43900 615 aaPredicted RBP6.31□□□□□ -1.4
SYNPO2-206ENST00000610556 WNT1P04628 370 aa6.31□□□□□ -1.4
SYNPO2-206ENST00000610556 ZNF35P13682 527 aa6.31□□□□□ -1.4
SYNPO2-206ENST00000610556 SPI1P17947 270 aa6.31□□□□□ -1.4
SYNPO2-206ENST00000610556 PTBP1P26599 531 aaKnown RBP eCLIP6.31□□□□□ -1.4
SYNPO2-206ENST00000610556 TACR3P29371 465 aa6.31□□□□□ -1.4
SYNPO2-206ENST00000610556 TSFMP43897 325 aaKnown RBP6.31□□□□□ -1.4
SYNPO2-206ENST00000610556 SLC6A9P48067 706 aa6.31□□□□□ -1.4
SYNPO2-206ENST00000610556 ARRB1P49407 418 aaPredicted RBP6.31□□□□□ -1.4
SYNPO2-206ENST00000610556 CHAF1BQ13112 559 aa6.31□□□□□ -1.4
SYNPO2-206ENST00000610556 EXOSC2Q13868 293 aaKnown RBP6.31□□□□□ -1.4
SYNPO2-206ENST00000610556 KCNAB1Q14722 419 aa6.31□□□□□ -1.4
SYNPO2-206ENST00000610556 RNASE10Q5GAN6 216 aaKnown RBP6.31□□□□□ -1.4
SYNPO2-206ENST00000610556 EOGTQ5NDL2 527 aa6.31□□□□□ -1.4
SYNPO2-206ENST00000610556 CARD17Q5XLA6 110 aa6.31□□□□□ -1.4
SYNPO2-206ENST00000610556 MED25Q71SY5 747 aa6.31□□□□□ -1.4
SYNPO2-206ENST00000610556 ETFBKMTQ8IXQ9 262 aa6.31□□□□□ -1.4
SYNPO2-206ENST00000610556 CCDC36Q8IYA8 594 aa6.31□□□□□ -1.4
SYNPO2-206ENST00000610556 PLPP7Q8NBV4 271 aa6.31□□□□□ -1.4
SYNPO2-206ENST00000610556 RCBTB1Q8NDN9 531 aa6.31□□□□□ -1.4
SYNPO2-206ENST00000610556 TSTD1Q8NFU3 115 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms