RNA–Protein interactions for RNA: ENST00000610401.4

SSBP3-216, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 5 BASIC

Gene SSBP3, Length 3,168 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-216ENST00000610401 SLC2A5P22732 501 aa18.69■□□□□ 0.58
SSBP3-216ENST00000610401 HDAC8Q9BY41 377 aa18.69■□□□□ 0.58
SSBP3-216ENST00000610401 CHST6Q9GZX3 395 aa18.69■□□□□ 0.58
SSBP3-216ENST00000610401 NUP50Q9UKX7 468 aa18.69■□□□□ 0.58
SSBP3-216ENST00000610401 MED12Q93074 2177 aa18.69■□□□□ 0.58
SSBP3-216ENST00000610401 PRSS38A1L453 326 aa18.69■□□□□ 0.58
SSBP3-216ENST00000610401 DCTN6O00399 190 aa18.69■□□□□ 0.58
SSBP3-216ENST00000610401 PTP4A3O75365 173 aa18.69■□□□□ 0.58
SSBP3-216ENST00000610401 PLGP00747 810 aaPredicted RBP18.69■□□□□ 0.58
SSBP3-216ENST00000610401 HLA-DQA2P01906 255 aa18.69■□□□□ 0.58
SSBP3-216ENST00000610401 UBE2NLQ5JXB2 153 aa18.69■□□□□ 0.58
SSBP3-216ENST00000610401 SLC35D2Q76EJ3 337 aa18.69■□□□□ 0.58
SSBP3-216ENST00000610401 ASB16Q96NS5 453 aa18.69■□□□□ 0.58
SSBP3-216ENST00000610401 PLA2G2FQ9BZM2 168 aa18.69■□□□□ 0.58
SSBP3-216ENST00000610401 MAFFQ9ULX9 164 aa18.69■□□□□ 0.58
SSBP3-216ENST00000610401 V9GY05 133 aa18.69■□□□□ 0.58
SSBP3-216ENST00000610401 H3BUI4 141 aa18.69■□□□□ 0.58
SSBP3-216ENST00000610401 IGF2P01344 180 aa18.69■□□□□ 0.58
SSBP3-216ENST00000610401 NFYAP23511 347 aaPredicted RBP18.69■□□□□ 0.58
SSBP3-216ENST00000610401 LSSP48449 732 aa18.69■□□□□ 0.58
SSBP3-216ENST00000610401 P2RX1P51575 399 aa18.69■□□□□ 0.58
SSBP3-216ENST00000610401 EFNB2P52799 333 aa18.69■□□□□ 0.58
SSBP3-216ENST00000610401 CBFBQ13951 182 aa18.69■□□□□ 0.58
SSBP3-216ENST00000610401 C4orf46Q504U0 113 aa18.69■□□□□ 0.58
SSBP3-216ENST00000610401 DCAF12L2Q5VW00 463 aa18.69■□□□□ 0.58
SSBP3-216ENST00000610401 PRAMEF8Q5VWM4 474 aa18.69■□□□□ 0.58
SSBP3-216ENST00000610401 PRAMEF7Q5VXH5 474 aa18.69■□□□□ 0.58
SSBP3-216ENST00000610401 B3GNTL1Q67FW5 361 aaPredicted RBP18.69■□□□□ 0.58
SSBP3-216ENST00000610401 TMEM81Q6P7N7 255 aa18.69■□□□□ 0.58
SSBP3-216ENST00000610401 TMPRSS11FQ6ZWK6 438 aa18.69■□□□□ 0.58
SSBP3-216ENST00000610401 OR51D1Q8NGF3 324 aa18.69■□□□□ 0.58
SSBP3-216ENST00000610401 TTC9Q92623 222 aa18.69■□□□□ 0.58
SSBP3-216ENST00000610401 NKD1Q969G9 470 aa18.69■□□□□ 0.58
SSBP3-216ENST00000610401 OR2A5Q96R48 311 aa18.69■□□□□ 0.58
SSBP3-216ENST00000610401 ABRACLQ9P1F3 81 aa18.69■□□□□ 0.58
SSBP3-216ENST00000610401 POMT2Q9UKY4 750 aa18.69■□□□□ 0.58
SSBP3-216ENST00000610401 C19orf53Q9UNZ5 99 aaPredicted RBP18.69■□□□□ 0.58
SSBP3-216ENST00000610401 SLC6A5Q9Y345 797 aa18.69■□□□□ 0.58
SSBP3-216ENST00000610401 BRWD1Q9NSI6 2320 aa18.68■□□□□ 0.58
SSBP3-216ENST00000610401 FRYLO94915 3013 aa18.68■□□□□ 0.58
SSBP3-216ENST00000610401 KCNAB3O43448 404 aa18.68■□□□□ 0.58
SSBP3-216ENST00000610401 CREBL2O60519 120 aaPredicted RBP18.68■□□□□ 0.58
SSBP3-216ENST00000610401 SERPINA3P01011 423 aa18.68■□□□□ 0.58
SSBP3-216ENST00000610401 UGT2B7P16662 529 aa18.68■□□□□ 0.58
SSBP3-216ENST00000610401 C1orf61Q13536 156 aa18.68■□□□□ 0.58
SSBP3-216ENST00000610401 GPR18Q14330 331 aa18.68■□□□□ 0.58
SSBP3-216ENST00000610401 ARHGEF6Q15052 776 aa18.68■□□□□ 0.58
SSBP3-216ENST00000610401 CLLU1Q5K131 121 aa18.68■□□□□ 0.58
SSBP3-216ENST00000610401 C17orf107Q6ZR85 190 aa18.68■□□□□ 0.58
SSBP3-216ENST00000610401 OR6M1Q8NGM8 313 aa18.68■□□□□ 0.58
SSBP3-216ENST00000610401 RGP1Q92546 391 aaPredicted RBP18.68■□□□□ 0.58
SSBP3-216ENST00000610401 DMRTA2Q96SC8 542 aa18.68■□□□□ 0.58
SSBP3-216ENST00000610401 TRAV8-7A0A075B6U6 113 aa18.68■□□□□ 0.58
SSBP3-216ENST00000610401 ANXA2P2A6NMY6 339 aa18.68■□□□□ 0.58
SSBP3-216ENST00000610401 KHNYNO15037 678 aaKnown RBP18.68■□□□□ 0.58
SSBP3-216ENST00000610401 ANXA2P07355 339 aaKnown RBP18.68■□□□□ 0.58
SSBP3-216ENST00000610401 SPI1P17947 270 aa18.68■□□□□ 0.58
SSBP3-216ENST00000610401 OR6N2Q8NGY6 317 aa18.68■□□□□ 0.58
SSBP3-216ENST00000610401 KLHDC3Q9BQ90 382 aa18.68■□□□□ 0.58
SSBP3-216ENST00000610401 ZNF879B4DU55 563 aa18.67■□□□□ 0.58
SSBP3-216ENST00000610401 C11orf98E9PRG8 122 aa18.67■□□□□ 0.58
SSBP3-216ENST00000610401 TIMP1P01033 207 aa18.67■□□□□ 0.58
SSBP3-216ENST00000610401 ARHGAP11AQ6P4F7 1023 aa18.67■□□□□ 0.58
SSBP3-216ENST00000610401 CDRT4Q8N9R6 151 aa18.67■□□□□ 0.58
SSBP3-216ENST00000610401 STK35Q8TDR2 534 aa18.67■□□□□ 0.58
SSBP3-216ENST00000610401 NR4A3Q92570 626 aa18.67■□□□□ 0.58
SSBP3-216ENST00000610401 ATOH1Q92858 354 aaPredicted RBP18.67■□□□□ 0.58
SSBP3-216ENST00000610401 PITHD1Q9GZP4 211 aaPredicted RBP18.67■□□□□ 0.58
SSBP3-216ENST00000610401 MOKQ9UQ07 419 aa18.67■□□□□ 0.58
SSBP3-216ENST00000610401 A0A0B4J2E0 115 aa18.67■□□□□ 0.58
SSBP3-216ENST00000610401 A0A1B0GX12 115 aa18.67■□□□□ 0.58
SSBP3-216ENST00000610401 NDUFB2O95178 105 aa18.67■□□□□ 0.58
SSBP3-216ENST00000610401 NUP62P37198 522 aaPredicted RBP18.67■□□□□ 0.58
SSBP3-216ENST00000610401 GAS6Q14393 721 aa18.67■□□□□ 0.58
SSBP3-216ENST00000610401 LIPNQ5VXI9 398 aa18.67■□□□□ 0.58
SSBP3-216ENST00000610401 YAF2Q8IY57 180 aa18.67■□□□□ 0.58
SSBP3-216ENST00000610401 ZNF676Q8N7Q3 588 aa18.67■□□□□ 0.58
SSBP3-216ENST00000610401 PIPOXQ9P0Z9 390 aa18.67■□□□□ 0.58
SSBP3-216ENST00000610401 COPZ2Q9P299 210 aa18.67■□□□□ 0.58
SSBP3-216ENST00000610401 SLC22A7Q9Y694 548 aa18.67■□□□□ 0.58
SSBP3-216ENST00000610401 A0A0A6YYC8 382 aaPredicted RBP18.67■□□□□ 0.58
SSBP3-216ENST00000610401 I3L1I5 382 aaPredicted RBP18.67■□□□□ 0.58
SSBP3-216ENST00000610401 CDKN2AP42771 156 aaKnown RBP18.67■□□□□ 0.58
SSBP3-216ENST00000610401 H2BFSP57053 126 aa18.67■□□□□ 0.58
SSBP3-216ENST00000610401 RPS15AP62244 130 aaKnown RBP18.67■□□□□ 0.58
SSBP3-216ENST00000610401 RUNX3Q13761 415 aa18.67■□□□□ 0.58
SSBP3-216ENST00000610401 LIN54Q6MZP7 749 aa18.67■□□□□ 0.58
SSBP3-216ENST00000610401 DPY19L4Q7Z388 723 aa18.67■□□□□ 0.58
SSBP3-216ENST00000610401 PRSS42Q7Z5A4 293 aa18.67■□□□□ 0.58
SSBP3-216ENST00000610401 ST8SIA2Q92186 375 aa18.67■□□□□ 0.58
SSBP3-216ENST00000610401 RAB7BQ96AH8 199 aa18.67■□□□□ 0.58
SSBP3-216ENST00000610401 RAB11FIP5Q9BXF6 653 aa18.67■□□□□ 0.58
SSBP3-216ENST00000610401 CSTAP01040 98 aa18.66■□□□□ 0.58
SSBP3-216ENST00000610401 IFNA16P05015 189 aa18.66■□□□□ 0.58
SSBP3-216ENST00000610401 ADRA2CP18825 462 aa18.66■□□□□ 0.58
SSBP3-216ENST00000610401 GDI1P31150 447 aa18.66■□□□□ 0.58
SSBP3-216ENST00000610401 ACTC1P68032 377 aa18.66■□□□□ 0.58
SSBP3-216ENST00000610401 ACTA1P68133 377 aa18.66■□□□□ 0.58
SSBP3-216ENST00000610401 SORDQ00796 357 aa18.66■□□□□ 0.58
SSBP3-216ENST00000610401 PRR22Q8IZ63 422 aa18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 77.2 ms