RNA–Protein interactions for RNA: ENST00000609587.1

SMCHD1-213, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

Gene SMCHD1, Length 460 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-213ENST00000609587 OR2AP1Q8NGE2 309 aa3.01□□□□□ -1.93
SMCHD1-213ENST00000609587 OR4D9Q8NGE8 314 aa3.01□□□□□ -1.93
SMCHD1-213ENST00000609587 ZNF461Q8TAF7 563 aa3.01□□□□□ -1.93
SMCHD1-213ENST00000609587 SETD7Q8WTS6 366 aaKnown RBP3.01□□□□□ -1.93
SMCHD1-213ENST00000609587 DDI1Q8WTU0 396 aa3.01□□□□□ -1.93
SMCHD1-213ENST00000609587 TSEN15Q8WW01 171 aaKnown RBP3.01□□□□□ -1.93
SMCHD1-213ENST00000609587 MAIP1Q8WWC4 291 aa3.01□□□□□ -1.93
SMCHD1-213ENST00000609587 ZNF414Q96IQ9 312 aa3.01□□□□□ -1.93
SMCHD1-213ENST00000609587 TGM7Q96PF1 710 aa3.01□□□□□ -1.93
SMCHD1-213ENST00000609587 NIPSNAP3BQ9BS92 247 aa3.01□□□□□ -1.93
SMCHD1-213ENST00000609587 OSBPL10Q9BXB5 764 aa3.01□□□□□ -1.93
SMCHD1-213ENST00000609587 GON7Q9BXV9 100 aa3.01□□□□□ -1.93
SMCHD1-213ENST00000609587 AZI2Q9H6S1 392 aa3.01□□□□□ -1.93
SMCHD1-213ENST00000609587 SYNDIG1Q9H7V2 258 aa3.01□□□□□ -1.93
SMCHD1-213ENST00000609587 LY9Q9HBG7 655 aa3.01□□□□□ -1.93
SMCHD1-213ENST00000609587 IL36GQ9NZH8 169 aa3.01□□□□□ -1.93
SMCHD1-213ENST00000609587 PIPOXQ9P0Z9 390 aa3.01□□□□□ -1.93
SMCHD1-213ENST00000609587 LCMT1Q9UIC8 334 aa3.01□□□□□ -1.93
SMCHD1-213ENST00000609587 PHF11Q9UIL8 331 aa3.01□□□□□ -1.93
SMCHD1-213ENST00000609587 CELA1Q9UNI1 258 aa3.01□□□□□ -1.93
SMCHD1-213ENST00000609587 IFT52Q9Y366 437 aa3.01□□□□□ -1.93
SMCHD1-213ENST00000609587 LRP5LA4QPB2 252 aa3□□□□□ -1.93
SMCHD1-213ENST00000609587 FAM231BA6NCW3 169 aa3□□□□□ -1.93
SMCHD1-213ENST00000609587 HAS3O00219 553 aa3□□□□□ -1.93
SMCHD1-213ENST00000609587 ZW10O43264 779 aa3□□□□□ -1.93
SMCHD1-213ENST00000609587 AKR7A2O43488 359 aa3□□□□□ -1.93
SMCHD1-213ENST00000609587 SNAI1O95863 264 aaPredicted RBP3□□□□□ -1.93
SMCHD1-213ENST00000609587 ACTL6AO96019 429 aa3□□□□□ -1.93
SMCHD1-213ENST00000609587 SERPINA3P01011 423 aa3□□□□□ -1.93
SMCHD1-213ENST00000609587 TIMP1P01033 207 aa3□□□□□ -1.93
SMCHD1-213ENST00000609587 PABPC4LP0CB38 370 aaKnown RBP3□□□□□ -1.93
SMCHD1-213ENST00000609587 OR8G3PP0DMU2 310 aa3□□□□□ -1.93
SMCHD1-213ENST00000609587 PNMTP11086 282 aa3□□□□□ -1.93
SMCHD1-213ENST00000609587 IMPDH1P20839 514 aa3□□□□□ -1.93
SMCHD1-213ENST00000609587 GABRR1P24046 479 aa3□□□□□ -1.93
SMCHD1-213ENST00000609587 MMP11P24347 488 aa3□□□□□ -1.93
SMCHD1-213ENST00000609587 LAP3P28838 519 aa3□□□□□ -1.93
SMCHD1-213ENST00000609587 CD1BP29016 333 aa3□□□□□ -1.93
SMCHD1-213ENST00000609587 ATP5C1P36542 298 aaKnown RBP3□□□□□ -1.93
SMCHD1-213ENST00000609587 NUP62P37198 522 aaPredicted RBP3□□□□□ -1.93
SMCHD1-213ENST00000609587 DAP3P51398 398 aaKnown RBP3□□□□□ -1.93
SMCHD1-213ENST00000609587 HNRNPA3P51991 378 aaKnown RBP3□□□□□ -1.93
SMCHD1-213ENST00000609587 BLVRAP53004 296 aa3□□□□□ -1.93
SMCHD1-213ENST00000609587 AIF1P55008 147 aa3□□□□□ -1.93
SMCHD1-213ENST00000609587 RIPK4P57078 832 aa3□□□□□ -1.93
SMCHD1-213ENST00000609587 RPL23AP62750 156 aaKnown RBP3□□□□□ -1.93
SMCHD1-213ENST00000609587 XIAPP98170 497 aa3□□□□□ -1.93
SMCHD1-213ENST00000609587 ORC2Q13416 577 aaPredicted RBP3□□□□□ -1.93
SMCHD1-213ENST00000609587 ZNF829Q3KNS6 432 aaPredicted RBP3□□□□□ -1.93
SMCHD1-213ENST00000609587 CCDC14Q49A88 953 aa3□□□□□ -1.93
SMCHD1-213ENST00000609587 BEND3Q5T5X7 828 aa3□□□□□ -1.93
SMCHD1-213ENST00000609587 PIP5KL1Q5T9C9 394 aa3□□□□□ -1.93
SMCHD1-213ENST00000609587 FAM173BQ6P4H8 233 aa3□□□□□ -1.93
SMCHD1-213ENST00000609587 ERICH5Q6P6B1 374 aa3□□□□□ -1.93
SMCHD1-213ENST00000609587 UNQ9370/PRO34162Q6UXP9 181 aa3□□□□□ -1.93
SMCHD1-213ENST00000609587 ACOT7LQ6ZUV0 252 aa3□□□□□ -1.93
SMCHD1-213ENST00000609587 EFL1Q7Z2Z2 1120 aaKnown RBP3□□□□□ -1.93
SMCHD1-213ENST00000609587 FAM228AQ86W67 206 aa3□□□□□ -1.93
SMCHD1-213ENST00000609587 ERI1Q8IV48 349 aaKnown RBP3□□□□□ -1.93
SMCHD1-213ENST00000609587 TMEM123Q8N131 208 aa3□□□□□ -1.93
SMCHD1-213ENST00000609587 OR56B4Q8NH76 319 aa3□□□□□ -1.93
SMCHD1-213ENST00000609587 SLC22A8Q8TCC7 542 aa3□□□□□ -1.93
SMCHD1-213ENST00000609587 FRAT1Q92837 279 aaPredicted RBP3□□□□□ -1.93
SMCHD1-213ENST00000609587 EMG1Q92979 244 aaKnown RBP3□□□□□ -1.93
SMCHD1-213ENST00000609587 NUS1Q96E22 293 aa3□□□□□ -1.93
SMCHD1-213ENST00000609587 PGLYRP4Q96LB8 373 aa3□□□□□ -1.93
SMCHD1-213ENST00000609587 PANX2Q96RD6 677 aa3□□□□□ -1.93
SMCHD1-213ENST00000609587 KLHDC3Q9BQ90 382 aa3□□□□□ -1.93
SMCHD1-213ENST00000609587 PKIBQ9C010 78 aa3□□□□□ -1.93
SMCHD1-213ENST00000609587 MAGT1Q9H0U3 335 aa3□□□□□ -1.93
SMCHD1-213ENST00000609587 LRRC19Q9H756 370 aa3□□□□□ -1.93
SMCHD1-213ENST00000609587 FN3KRPQ9HA64 309 aa3□□□□□ -1.93
SMCHD1-213ENST00000609587 RAB18Q9NP72 206 aa3□□□□□ -1.93
SMCHD1-213ENST00000609587 ETNK2Q9NVF9 386 aa3□□□□□ -1.93
SMCHD1-213ENST00000609587 ADAM22Q9P0K1 906 aa3□□□□□ -1.93
SMCHD1-213ENST00000609587 PRELID1Q9Y255 219 aa3□□□□□ -1.93
SMCHD1-213ENST00000609587 SH3TC1Q8TE82 1336 aa2.99□□□□□ -1.93
SMCHD1-213ENST00000609587 A0A0J9YYE9 177 aa2.99□□□□□ -1.93
SMCHD1-213ENST00000609587 HELTA6NFD8 242 aa2.99□□□□□ -1.93
SMCHD1-213ENST00000609587 TRDCB7Z8K6 153 aa2.99□□□□□ -1.93
SMCHD1-213ENST00000609587 WRBO00258 174 aa2.99□□□□□ -1.93
SMCHD1-213ENST00000609587 TRDMT1O14717 391 aaKnown RBP2.99□□□□□ -1.93
SMCHD1-213ENST00000609587 ARPC3O15145 178 aa2.99□□□□□ -1.93
SMCHD1-213ENST00000609587 EMC8O43402 210 aa2.99□□□□□ -1.93
SMCHD1-213ENST00000609587 SULT1B1O43704 296 aa2.99□□□□□ -1.93
SMCHD1-213ENST00000609587 CXCL13O43927 109 aa2.99□□□□□ -1.93
SMCHD1-213ENST00000609587 OR10H3O60404 316 aa2.99□□□□□ -1.93
SMCHD1-213ENST00000609587 MMP23AO75900 390 aa2.99□□□□□ -1.93
SMCHD1-213ENST00000609587 TRBC1P01850 177 aa2.99□□□□□ -1.93
SMCHD1-213ENST00000609587 CLTAP09496 248 aa2.99□□□□□ -1.93
SMCHD1-213ENST00000609587 DUX4L4P0CJ87 422 aa2.99□□□□□ -1.93
SMCHD1-213ENST00000609587 ZNF44P15621 663 aa2.99□□□□□ -1.93
SMCHD1-213ENST00000609587 SRMP19623 302 aa2.99□□□□□ -1.93
SMCHD1-213ENST00000609587 IL18Q14116 193 aa2.99□□□□□ -1.93
SMCHD1-213ENST00000609587 ARL6IP1Q15041 203 aa2.99□□□□□ -1.93
SMCHD1-213ENST00000609587 FAM83EQ2M2I3 478 aa2.99□□□□□ -1.93
SMCHD1-213ENST00000609587 LRRC66Q68CR7 880 aa2.99□□□□□ -1.93
SMCHD1-213ENST00000609587 BHLHA15Q7RTS1 189 aaPredicted RBP2.99□□□□□ -1.93
SMCHD1-213ENST00000609587 FAM220AQ7Z4H9 259 aa2.99□□□□□ -1.93
SMCHD1-213ENST00000609587 VRK2Q86Y07 508 aa2.99□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms