RNA–Protein interactions for RNA: ENST00000608720.5

CTCFL-219, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best)

Gene CTCFL, Length 2,241 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-219ENST00000608720 ADAM11O75078 769 aa13.44□□□□□ -0.26
CTCFL-219ENST00000608720 APBB3O95704 486 aa13.44□□□□□ -0.26
CTCFL-219ENST00000608720 SYPP08247 313 aa13.44□□□□□ -0.26
CTCFL-219ENST00000608720 FGF2P09038 288 aa13.44□□□□□ -0.26
CTCFL-219ENST00000608720 SSTR2P30874 369 aa13.44□□□□□ -0.26
CTCFL-219ENST00000608720 LCN1P31025 176 aa13.44□□□□□ -0.26
CTCFL-219ENST00000608720 HOXA1P49639 335 aaPredicted RBP13.44□□□□□ -0.26
CTCFL-219ENST00000608720 GPR143P51810 404 aa13.44□□□□□ -0.26
CTCFL-219ENST00000608720 ZMYND11Q15326 602 aa13.44□□□□□ -0.26
CTCFL-219ENST00000608720 ZNHIT3Q15649 155 aaPredicted RBP13.44□□□□□ -0.26
CTCFL-219ENST00000608720 ITPRIPL2Q3MIP1 535 aa13.44□□□□□ -0.26
CTCFL-219ENST00000608720 LINGO2Q7L985 606 aa13.44□□□□□ -0.26
CTCFL-219ENST00000608720 HSD17B13Q7Z5P4 300 aaPredicted RBP13.44□□□□□ -0.26
CTCFL-219ENST00000608720 IZUMO1Q8IYV9 350 aa13.44□□□□□ -0.26
CTCFL-219ENST00000608720 EID2Q8N6I1 236 aa13.44□□□□□ -0.26
CTCFL-219ENST00000608720 OR51L1Q8NGJ5 315 aa13.44□□□□□ -0.26
CTCFL-219ENST00000608720 TSACCQ96A04 125 aaPredicted RBP13.44□□□□□ -0.26
CTCFL-219ENST00000608720 MS4A3Q96HJ5 214 aa13.44□□□□□ -0.26
CTCFL-219ENST00000608720 PDCD1LG2Q9BQ51 273 aa13.44□□□□□ -0.26
CTCFL-219ENST00000608720 ORAI3Q9BRQ5 295 aa13.44□□□□□ -0.26
CTCFL-219ENST00000608720 CAPN10Q9HC96 672 aa13.44□□□□□ -0.26
CTCFL-219ENST00000608720 NOX4Q9NPH5 578 aa13.44□□□□□ -0.26
CTCFL-219ENST00000608720 HCN3Q9P1Z3 774 aa13.44□□□□□ -0.26
CTCFL-219ENST00000608720 SNRNP200O75643 2136 aaKnown RBP13.44□□□□□ -0.26
CTCFL-219ENST00000608720 CHD9Q3L8U1 2897 aa13.43□□□□□ -0.26
CTCFL-219ENST00000608720 SCN3AQ9NY46 2000 aa13.43□□□□□ -0.26
CTCFL-219ENST00000608720 FAM25EA8MYX2 175 aa13.43□□□□□ -0.26
CTCFL-219ENST00000608720 GABARAPH6UMI1 98 aa13.43□□□□□ -0.26
CTCFL-219ENST00000608720 K7EQS6 105 aa13.43□□□□□ -0.26
CTCFL-219ENST00000608720 MAOBP27338 520 aa13.43□□□□□ -0.26
CTCFL-219ENST00000608720 RPL4P36578 427 aaKnown RBP13.43□□□□□ -0.26
CTCFL-219ENST00000608720 SCRN3Q0VDG4 424 aa13.43□□□□□ -0.26
CTCFL-219ENST00000608720 MTFR2Q6P444 385 aa13.43□□□□□ -0.26
CTCFL-219ENST00000608720 LRFN4Q6PJG9 635 aa13.43□□□□□ -0.26
CTCFL-219ENST00000608720 SHISA5Q8N114 240 aa13.43□□□□□ -0.26
CTCFL-219ENST00000608720 CLRN3Q8NCR9 226 aa13.43□□□□□ -0.26
CTCFL-219ENST00000608720 BAHD1Q8TBE0 780 aaPredicted RBP13.43□□□□□ -0.26
CTCFL-219ENST00000608720 HERVK_113Q902F9 699 aa13.43□□□□□ -0.26
CTCFL-219ENST00000608720 LMAN2LQ9H0V9 348 aa13.43□□□□□ -0.26
CTCFL-219ENST00000608720 AUNIPQ9H7T9 357 aa13.43□□□□□ -0.26
CTCFL-219ENST00000608720 HRASLSQ9HDD0 168 aa13.43□□□□□ -0.26
CTCFL-219ENST00000608720 NANSQ9NR45 359 aa13.43□□□□□ -0.26
CTCFL-219ENST00000608720 COPS3Q9UNS2 423 aa13.43□□□□□ -0.26
CTCFL-219ENST00000608720 IFITM5A6NNB3 132 aa13.43□□□□□ -0.26
CTCFL-219ENST00000608720 MCIDASD6RGH6 385 aa13.43□□□□□ -0.26
CTCFL-219ENST00000608720 G3V3Q6 166 aa13.43□□□□□ -0.26
CTCFL-219ENST00000608720 AIPO00170 330 aa13.43□□□□□ -0.26
CTCFL-219ENST00000608720 SULT1B1O43704 296 aa13.43□□□□□ -0.26
CTCFL-219ENST00000608720 OR10H2O60403 315 aa13.43□□□□□ -0.26
CTCFL-219ENST00000608720 RASGRP1O95267 797 aa13.43□□□□□ -0.26
CTCFL-219ENST00000608720 PSMB1P20618 241 aaKnown RBP13.43□□□□□ -0.26
CTCFL-219ENST00000608720 RAB38P57729 211 aa13.43□□□□□ -0.26
CTCFL-219ENST00000608720 PSG6Q00889 435 aa13.43□□□□□ -0.26
CTCFL-219ENST00000608720 GPM6BQ13491 265 aa13.43□□□□□ -0.26
CTCFL-219ENST00000608720 GPR18Q14330 331 aa13.43□□□□□ -0.26
CTCFL-219ENST00000608720 OPCMLQ14982 345 aa13.43□□□□□ -0.26
CTCFL-219ENST00000608720 ISXQ2M1V0 245 aa13.43□□□□□ -0.26
CTCFL-219ENST00000608720 ELFN2Q5R3F8 820 aa13.43□□□□□ -0.26
CTCFL-219ENST00000608720 FAM199XQ6PEV8 388 aaPredicted RBP13.43□□□□□ -0.26
CTCFL-219ENST00000608720 ZC3H14Q6PJT7 736 aaKnown RBP13.43□□□□□ -0.26
CTCFL-219ENST00000608720 C3P1Q6ZMU1 363 aa13.43□□□□□ -0.26
CTCFL-219ENST00000608720 CHMP1BQ7LBR1 199 aa13.43□□□□□ -0.26
CTCFL-219ENST00000608720 NPEPL1Q8NDH3 523 aa13.43□□□□□ -0.26
CTCFL-219ENST00000608720 FAM71CQ8NEG0 241 aa13.43□□□□□ -0.26
CTCFL-219ENST00000608720 DERL3Q96Q80 235 aa13.43□□□□□ -0.26
CTCFL-219ENST00000608720 USB1Q9BQ65 265 aaKnown RBP13.43□□□□□ -0.26
CTCFL-219ENST00000608720 MRI1Q9BV20 369 aa13.43□□□□□ -0.26
CTCFL-219ENST00000608720 ZNF281Q9Y2X9 895 aa13.43□□□□□ -0.26
CTCFL-219ENST00000608720 DOCK9Q9BZ29 2069 aa13.43□□□□□ -0.26
CTCFL-219ENST00000608720 ARPC4-TTLL3A0A0A6YYG9 625 aa13.42□□□□□ -0.26
CTCFL-219ENST00000608720 C2orf74A8MZ97 194 aa13.42□□□□□ -0.26
CTCFL-219ENST00000608720 ARPC3O15145 178 aa13.42□□□□□ -0.26
CTCFL-219ENST00000608720 PIN1P1O15428 100 aa13.42□□□□□ -0.26
CTCFL-219ENST00000608720 HPXP02790 462 aa13.42□□□□□ -0.26
CTCFL-219ENST00000608720 MYOGP15173 224 aa13.42□□□□□ -0.26
CTCFL-219ENST00000608720 NTSR1P30989 418 aa13.42□□□□□ -0.26
CTCFL-219ENST00000608720 GDI1P31150 447 aa13.42□□□□□ -0.26
CTCFL-219ENST00000608720 PSMB10P40306 273 aa13.42□□□□□ -0.26
CTCFL-219ENST00000608720 ZNF141Q15928 474 aa13.42□□□□□ -0.26
CTCFL-219ENST00000608720 METTL11BQ5VVY1 283 aa13.42□□□□□ -0.26
CTCFL-219ENST00000608720 SFRP4Q6FHJ7 346 aaPredicted RBP13.42□□□□□ -0.26
CTCFL-219ENST00000608720 KIRREL2Q6UWL6 708 aa13.42□□□□□ -0.26
CTCFL-219ENST00000608720 RNF44Q7L0R7 432 aa13.42□□□□□ -0.26
CTCFL-219ENST00000608720 NLRC3Q7RTR2 1065 aa13.42□□□□□ -0.26
CTCFL-219ENST00000608720 CSNK1A1LQ8N752 337 aa13.42□□□□□ -0.26
CTCFL-219ENST00000608720 RPS4Y2Q8TD47 263 aa13.42□□□□□ -0.26
CTCFL-219ENST00000608720 PCNPQ8WW12 178 aaKnown RBP13.42□□□□□ -0.26
CTCFL-219ENST00000608720 HSPA12BQ96MM6 686 aa13.42□□□□□ -0.26
CTCFL-219ENST00000608720 DDOQ99489 341 aa13.42□□□□□ -0.26
CTCFL-219ENST00000608720 FBRSQ9HAH7 460 aa13.42□□□□□ -0.26
CTCFL-219ENST00000608720 NKIRAS2Q9NYR9 191 aa13.42□□□□□ -0.26
CTCFL-219ENST00000608720 KLHL9Q9P2J3 617 aa13.42□□□□□ -0.26
CTCFL-219ENST00000608720 PFDN2Q9UHV9 154 aa13.42□□□□□ -0.26
CTCFL-219ENST00000608720 RCE1Q9Y256 329 aa13.42□□□□□ -0.26
CTCFL-219ENST00000608720 SELENOFO60613 162 aa13.41□□□□□ -0.26
CTCFL-219ENST00000608720 B3GALNT1O75752 331 aa13.41□□□□□ -0.26
CTCFL-219ENST00000608720 KRT33AO76009 404 aa13.41□□□□□ -0.26
CTCFL-219ENST00000608720 IGKV1D-16P01601 117 aa13.41□□□□□ -0.26
CTCFL-219ENST00000608720 PVRP15151 417 aa13.41□□□□□ -0.26
CTCFL-219ENST00000608720 SPI1P17947 270 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms