RNA–Protein interactions for RNA: ENST00000601291.5

IRF3-228, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 1,556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-228ENST00000601291 FAM26EQ8N5C1 309 aa20.28■□□□□ 0.84
IRF3-228ENST00000601291 BPIFB6Q8NFQ5 453 aa20.28■□□□□ 0.84
IRF3-228ENST00000601291 ZNF566Q969W8 418 aa20.28■□□□□ 0.84
IRF3-228ENST00000601291 ABHD17AQ96GS6 310 aa20.28■□□□□ 0.84
IRF3-228ENST00000601291 SLC6A15Q9H2J7 730 aa20.28■□□□□ 0.84
IRF3-228ENST00000601291 ZDHHC11Q9H8X9 412 aa20.28■□□□□ 0.84
IRF3-228ENST00000601291 ADAM18Q9Y3Q7 739 aa20.28■□□□□ 0.84
IRF3-228ENST00000601291 CEP295Q9C0D2 2601 aa20.27■□□□□ 0.84
IRF3-228ENST00000601291 SH3D21A4FU49 640 aa20.27■□□□□ 0.84
IRF3-228ENST00000601291 TMEM8BA6NDV4 472 aa20.27■□□□□ 0.84
IRF3-228ENST00000601291 TAF4O00268 1085 aa20.27■□□□□ 0.84
IRF3-228ENST00000601291 SLC1A7O00341 560 aa20.27■□□□□ 0.84
IRF3-228ENST00000601291 IMPA2O14732 288 aa20.27■□□□□ 0.84
IRF3-228ENST00000601291 EIF1BO60739 113 aaKnown RBP20.27■□□□□ 0.84
IRF3-228ENST00000601291 SMNDC1O75940 238 aaKnown RBP eCLIP20.27■□□□□ 0.843e-6■■■□□ 15.3
IRF3-228ENST00000601291 AKR7A3O95154 331 aa20.27■□□□□ 0.84
IRF3-228ENST00000601291 CCDC159P0C7I6 412 aa20.27■□□□□ 0.84
IRF3-228ENST00000601291 ZNF3P17036 446 aa20.27■□□□□ 0.84
IRF3-228ENST00000601291 ERVK-25P63136 954 aa20.27■□□□□ 0.84
IRF3-228ENST00000601291 EFNB1P98172 346 aa20.27■□□□□ 0.84
IRF3-228ENST00000601291 PMP22Q01453 160 aa20.27■□□□□ 0.84
IRF3-228ENST00000601291 ZP4Q12836 540 aa20.27■□□□□ 0.84
IRF3-228ENST00000601291 TMEM201Q5SNT2 666 aa20.27■□□□□ 0.84
IRF3-228ENST00000601291 SLC25A30Q5SVS4 291 aa20.27■□□□□ 0.84
IRF3-228ENST00000601291 PDSS1Q5T2R2 415 aa20.27■□□□□ 0.84
IRF3-228ENST00000601291 LAIR2Q6ISS4 152 aa20.27■□□□□ 0.84
IRF3-228ENST00000601291 ZHX1-C8orf76Q96EF9 292 aa20.27■□□□□ 0.84
IRF3-228ENST00000601291 LRR1Q96L50 414 aa20.27■□□□□ 0.84
IRF3-228ENST00000601291 FN3KQ9H479 309 aa20.27■□□□□ 0.84
IRF3-228ENST00000601291 LDAHQ9H6V9 325 aa20.27■□□□□ 0.84
IRF3-228ENST00000601291 SCN3BQ9NY72 215 aa20.27■□□□□ 0.84
IRF3-228ENST00000601291 KLHL21Q9UJP4 597 aa20.27■□□□□ 0.84
IRF3-228ENST00000601291 GPR52Q9Y2T5 361 aa20.27■□□□□ 0.84
IRF3-228ENST00000601291 MPDZO75970 2070 aa20.27■□□□□ 0.84
IRF3-228ENST00000601291 NCKAP5O14513 1909 aa20.27■□□□□ 0.84
IRF3-228ENST00000601291 A0A0J9YW62 118 aa20.26■□□□□ 0.83
IRF3-228ENST00000601291 EIF1AYO14602 144 aaKnown RBP20.26■□□□□ 0.83
IRF3-228ENST00000601291 TNFSF11O14788 317 aa20.26■□□□□ 0.83
IRF3-228ENST00000601291 SEC14L5O43304 696 aa20.26■□□□□ 0.83
IRF3-228ENST00000601291 DNPH1O43598 174 aa20.26■□□□□ 0.83
IRF3-228ENST00000601291 OCLNQ16625 522 aa20.26■□□□□ 0.83
IRF3-228ENST00000601291 GPR139Q6DWJ6 353 aa20.26■□□□□ 0.83
IRF3-228ENST00000601291 GGNQ86UU5 652 aa20.26■□□□□ 0.83
IRF3-228ENST00000601291 UBQLNLQ8IYU4 475 aa20.26■□□□□ 0.83
IRF3-228ENST00000601291 EXO5Q9H790 373 aa20.26■□□□□ 0.83
IRF3-228ENST00000601291 GRHPRQ9UBQ7 328 aa20.26■□□□□ 0.83
IRF3-228ENST00000601291 TPRKBQ9Y3C4 175 aa20.26■□□□□ 0.83
IRF3-228ENST00000601291 A0A1W2PRG6 482 aa20.25■□□□□ 0.83
IRF3-228ENST00000601291 SNTNA6NMZ2 147 aa20.25■□□□□ 0.83
IRF3-228ENST00000601291 FAM20BO75063 409 aa20.25■□□□□ 0.83
IRF3-228ENST00000601291 SLC2A10O95528 541 aa20.25■□□□□ 0.83
IRF3-228ENST00000601291 ACTL6AO96019 429 aa20.25■□□□□ 0.83
IRF3-228ENST00000601291 CRHBPP24387 322 aa20.25■□□□□ 0.83
IRF3-228ENST00000601291 SDHAP31040 664 aa20.25■□□□□ 0.83
IRF3-228ENST00000601291 STARP49675 285 aa20.25■□□□□ 0.83
IRF3-228ENST00000601291 CLDN20P56880 219 aa20.25■□□□□ 0.83
IRF3-228ENST00000601291 SMN1Q16637 294 aaKnown RBP20.25■□□□□ 0.83
IRF3-228ENST00000601291 EMC4Q5J8M3 183 aa20.25■□□□□ 0.83
IRF3-228ENST00000601291 RNFT1Q5M7Z0 435 aa20.25■□□□□ 0.83
IRF3-228ENST00000601291 HBMQ6B0K9 141 aa20.25■□□□□ 0.83
IRF3-228ENST00000601291 PAQR6Q6TCH4 344 aa20.25■□□□□ 0.83
IRF3-228ENST00000601291 RBMXL3Q8N7X1 1067 aaKnown RBP20.25■□□□□ 0.83
IRF3-228ENST00000601291 ANKK1Q8NFD2 765 aa20.25■□□□□ 0.83
IRF3-228ENST00000601291 NAA11Q9BSU3 229 aaPredicted RBP20.25■□□□□ 0.83
IRF3-228ENST00000601291 DEFB127Q9H1M4 99 aa20.25■□□□□ 0.83
IRF3-228ENST00000601291 DNAJC27Q9NZQ0 273 aa20.25■□□□□ 0.83
IRF3-228ENST00000601291 B3GNT3Q9Y2A9 372 aa20.25■□□□□ 0.83
IRF3-228ENST00000601291 A0A1W2PNV4 684 aa20.25■□□□□ 0.83
IRF3-228ENST00000601291 M0R3G1 203 aa20.25■□□□□ 0.83
IRF3-228ENST00000601291 SERPINI2O75830 405 aa20.25■□□□□ 0.83
IRF3-228ENST00000601291 PAICSP22234 425 aaKnown RBP20.25■□□□□ 0.83
IRF3-228ENST00000601291 INAQ16352 499 aa20.25■□□□□ 0.83
IRF3-228ENST00000601291 FAM122BQ7Z309 247 aa20.25■□□□□ 0.83
IRF3-228ENST00000601291 TMEM99Q8N816 258 aa20.25■□□□□ 0.83
IRF3-228ENST00000601291 LSM14AQ8ND56 463 aaKnown RBP20.25■□□□□ 0.83
IRF3-228ENST00000601291 OR2V1Q8NHB1 315 aa20.25■□□□□ 0.83
IRF3-228ENST00000601291 NEIL3Q8TAT5 605 aa20.25■□□□□ 0.83
IRF3-228ENST00000601291 ABTB1Q969K4 478 aaPredicted RBP20.25■□□□□ 0.83
IRF3-228ENST00000601291 FANCFQ9NPI8 374 aa20.25■□□□□ 0.83
IRF3-228ENST00000601291 TIGARQ9NQ88 270 aa20.25■□□□□ 0.83
IRF3-228ENST00000601291 TP53TG5Q9Y2B4 290 aa20.25■□□□□ 0.83
IRF3-228ENST00000601291 ACACAQ13085 2346 aa20.24■□□□□ 0.83
IRF3-228ENST00000601291 URB1O60287 2271 aaKnown RBP20.24■□□□□ 0.83
IRF3-228ENST00000601291 TRGV5A0A0B4J1U4 118 aa20.24■□□□□ 0.83
IRF3-228ENST00000601291 TEX13CA0A0J9YWL9 993 aa20.24■□□□□ 0.83
IRF3-228ENST00000601291 AQP7P3A6NL99 342 aa20.24■□□□□ 0.83
IRF3-228ENST00000601291 MS4A18H0YCH9 400 aa20.24■□□□□ 0.83
IRF3-228ENST00000601291 K7EM74 188 aa20.24■□□□□ 0.83
IRF3-228ENST00000601291 XPNPEP2O43895 674 aa20.24■□□□□ 0.83
IRF3-228ENST00000601291 ENTPD6O75354 484 aa20.24■□□□□ 0.83
IRF3-228ENST00000601291 TXNDC12O95881 172 aa20.24■□□□□ 0.83
IRF3-228ENST00000601291 PLGP00747 810 aaPredicted RBP20.24■□□□□ 0.83
IRF3-228ENST00000601291 HIST1H1CP16403 213 aaKnown RBP20.24■□□□□ 0.83
IRF3-228ENST00000601291 EEF1B2P24534 225 aaKnown RBP20.24■□□□□ 0.83
IRF3-228ENST00000601291 LHX2P50458 406 aa20.24■□□□□ 0.83
IRF3-228ENST00000601291 GABARAPL2P60520 117 aa20.24■□□□□ 0.83
IRF3-228ENST00000601291 RAC3P60763 192 aa20.24■□□□□ 0.83
IRF3-228ENST00000601291 KHDRBS1Q07666 443 aaKnown RBP eCLIP20.24■□□□□ 0.83
IRF3-228ENST00000601291 ZNF239Q16600 458 aaKnown RBP20.24■□□□□ 0.83
IRF3-228ENST00000601291 MS4A18Q3C1V0 323 aa20.24■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms