RNA–Protein interactions for RNA: ENST00000600733.5

SHKBP1-225, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5 BASIC

Gene SHKBP1, Length 2,284 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-225ENST00000600733 SSNA1O43805 119 aa18.46■□□□□ 0.55
SHKBP1-225ENST00000600733 GLCEO94923 617 aa18.46■□□□□ 0.55
SHKBP1-225ENST00000600733 HPXP02790 462 aa18.46■□□□□ 0.55
SHKBP1-225ENST00000600733 IGHV4-34P06331 123 aa18.46■□□□□ 0.55
SHKBP1-225ENST00000600733 RABIFP47224 123 aa18.46■□□□□ 0.55
SHKBP1-225ENST00000600733 ZSWIM7Q19AV6 140 aa18.46■□□□□ 0.55
SHKBP1-225ENST00000600733 PRTGQ2VWP7 1150 aa18.46■□□□□ 0.55
SHKBP1-225ENST00000600733 PARGQ86W56 976 aa18.46■□□□□ 0.55
SHKBP1-225ENST00000600733 CMIPQ8IY22 773 aa18.46■□□□□ 0.55
SHKBP1-225ENST00000600733 C10orf53Q8N6V4 93 aa18.46■□□□□ 0.55
SHKBP1-225ENST00000600733 OR52I2Q8NH67 350 aa18.46■□□□□ 0.55
SHKBP1-225ENST00000600733 OR56B4Q8NH76 319 aa18.46■□□□□ 0.55
SHKBP1-225ENST00000600733 MOGAT1Q96PD6 335 aa18.46■□□□□ 0.55
SHKBP1-225ENST00000600733 KLHDC2Q9Y2U9 406 aa18.46■□□□□ 0.55
SHKBP1-225ENST00000600733 HS3ST3A1Q9Y663 406 aa18.46■□□□□ 0.55
SHKBP1-225ENST00000600733 ANKRD61A6NGH8 418 aa18.46■□□□□ 0.54
SHKBP1-225ENST00000600733 B4DGG1 531 aa18.46■□□□□ 0.54
SHKBP1-225ENST00000600733 OIP5O43482 229 aa18.46■□□□□ 0.54
SHKBP1-225ENST00000600733 SULT1A3P0DMM9 295 aa18.46■□□□□ 0.54
SHKBP1-225ENST00000600733 SULT1A4P0DMN0 295 aa18.46■□□□□ 0.54
SHKBP1-225ENST00000600733 DPP4P27487 766 aa18.46■□□□□ 0.54
SHKBP1-225ENST00000600733 CCR4P51679 360 aa18.46■□□□□ 0.54
SHKBP1-225ENST00000600733 PSMD4P55036 377 aaKnown RBP18.46■□□□□ 0.54
SHKBP1-225ENST00000600733 TEX261Q6UWH6 196 aa18.46■□□□□ 0.54
SHKBP1-225ENST00000600733 FAM109AQ8N4B1 249 aa18.46■□□□□ 0.54
SHKBP1-225ENST00000600733 RPS4Y2Q8TD47 263 aa18.46■□□□□ 0.54
SHKBP1-225ENST00000600733 C17orf50Q8WW18 174 aa18.46■□□□□ 0.54
SHKBP1-225ENST00000600733 RXFP3Q9NSD7 469 aa18.46■□□□□ 0.54
SHKBP1-225ENST00000600733 CLEC1BQ9P126 229 aa18.46■□□□□ 0.54
SHKBP1-225ENST00000600733 ELF5Q9UKW6 265 aaPredicted RBP18.46■□□□□ 0.54
SHKBP1-225ENST00000600733 U3KQ87 197 aa18.46■□□□□ 0.54
SHKBP1-225ENST00000600733 TMEM72A0PK05 275 aa18.45■□□□□ 0.54
SHKBP1-225ENST00000600733 OR5K4A6NMS3 321 aa18.45■□□□□ 0.54
SHKBP1-225ENST00000600733 OR8G3PP0DMU2 310 aa18.45■□□□□ 0.54
SHKBP1-225ENST00000600733 PTHLHP12272 177 aa18.45■□□□□ 0.54
SHKBP1-225ENST00000600733 ZP1P60852 638 aa18.45■□□□□ 0.54
SHKBP1-225ENST00000600733 PRPS1P60891 318 aa18.45■□□□□ 0.54
SHKBP1-225ENST00000600733 CD226Q15762 336 aa18.45■□□□□ 0.54
SHKBP1-225ENST00000600733 ZNF684Q5T5D7 378 aa18.45■□□□□ 0.54
SHKBP1-225ENST00000600733 ZNF527Q8NB42 609 aa18.45■□□□□ 0.54
SHKBP1-225ENST00000600733 OR11G2Q8NGC1 345 aa18.45■□□□□ 0.54
SHKBP1-225ENST00000600733 PIGKQ92643 395 aa18.45■□□□□ 0.54
SHKBP1-225ENST00000600733 S1PR5Q9H228 398 aa18.45■□□□□ 0.54
SHKBP1-225ENST00000600733 KLK11Q9UBX7 282 aa18.45■□□□□ 0.54
SHKBP1-225ENST00000600733 MRPS33Q9Y291 106 aaKnown RBP18.45■□□□□ 0.54
SHKBP1-225ENST00000600733 MEIKINA0A087WXM9 373 aa18.44■□□□□ 0.54
SHKBP1-225ENST00000600733 ELOA3DA6NLF2 546 aaPredicted RBP18.44■□□□□ 0.54
SHKBP1-225ENST00000600733 IFNA16P05015 189 aa18.44■□□□□ 0.54
SHKBP1-225ENST00000600733 CTSEP14091 401 aa18.44■□□□□ 0.54
SHKBP1-225ENST00000600733 CCR9P51686 369 aa18.44■□□□□ 0.54
SHKBP1-225ENST00000600733 RAG2P55895 527 aa18.44■□□□□ 0.54
SHKBP1-225ENST00000600733 IGLV3-21P80748 117 aaPredicted RBP18.44■□□□□ 0.54
SHKBP1-225ENST00000600733 CAMK2DQ13557 499 aa18.44■□□□□ 0.54
SHKBP1-225ENST00000600733 ELOA3BQ3SY89 546 aa18.44■□□□□ 0.54
SHKBP1-225ENST00000600733 SLC35F3Q8IY50 421 aa18.44■□□□□ 0.54
SHKBP1-225ENST00000600733 PIAS4Q8N2W9 510 aaPredicted RBP18.44■□□□□ 0.54
SHKBP1-225ENST00000600733 ELOA3Q8NG57 546 aa18.44■□□□□ 0.54
SHKBP1-225ENST00000600733 MRPL48Q96GC5 212 aaKnown RBP18.44■□□□□ 0.54
SHKBP1-225ENST00000600733 HEXA-AS1Q9H8Q6 139 aa18.44■□□□□ 0.54
SHKBP1-225ENST00000600733 HRASLSQ9HDD0 168 aa18.44■□□□□ 0.54
SHKBP1-225ENST00000600733 SLCO1B1Q9Y6L6 691 aa18.44■□□□□ 0.54
SHKBP1-225ENST00000600733 A0A1W2PQ72 361 aa18.44■□□□□ 0.54
SHKBP1-225ENST00000600733 LEUTXA8MZ59 168 aa18.44■□□□□ 0.54
SHKBP1-225ENST00000600733 F13BP05160 661 aa18.44■□□□□ 0.54
SHKBP1-225ENST00000600733 SSTR2P30874 369 aa18.44■□□□□ 0.54
SHKBP1-225ENST00000600733 RPS15P62841 145 aaKnown RBP18.44■□□□□ 0.54
SHKBP1-225ENST00000600733 HSF2Q03933 536 aa18.44■□□□□ 0.54
SHKBP1-225ENST00000600733 HTR4Q13639 388 aa18.44■□□□□ 0.54
SHKBP1-225ENST00000600733 FZD2Q14332 565 aa18.44■□□□□ 0.54
SHKBP1-225ENST00000600733 KLHL26Q53HC5 615 aa18.44■□□□□ 0.54
SHKBP1-225ENST00000600733 CBLN3Q6UW01 205 aa18.44■□□□□ 0.54
SHKBP1-225ENST00000600733 FGD2Q7Z6J4 655 aa18.44■□□□□ 0.54
SHKBP1-225ENST00000600733 ZNF595Q8IYB9 648 aa18.44■□□□□ 0.54
SHKBP1-225ENST00000600733 ZNF680Q8NEM1 530 aa18.44■□□□□ 0.54
SHKBP1-225ENST00000600733 PHYHIPQ92561 330 aa18.44■□□□□ 0.54
SHKBP1-225ENST00000600733 HGDQ93099 445 aa18.44■□□□□ 0.54
SHKBP1-225ENST00000600733 GPX7Q96SL4 187 aaPredicted RBP18.44■□□□□ 0.54
SHKBP1-225ENST00000600733 SPRTNQ9H040 489 aaPredicted RBP18.44■□□□□ 0.54
SHKBP1-225ENST00000600733 FKRPQ9H9S5 495 aa18.44■□□□□ 0.54
SHKBP1-225ENST00000600733 DLL4Q9NR61 685 aa18.44■□□□□ 0.54
SHKBP1-225ENST00000600733 V9GY05 133 aa18.44■□□□□ 0.54
SHKBP1-225ENST00000600733 SPTY2D1-AS1A0A0U1RR47 76 aa18.43■□□□□ 0.54
SHKBP1-225ENST00000600733 PRAMEF26H0Y7S4 382 aa18.43■□□□□ 0.54
SHKBP1-225ENST00000600733 DCTN6O00399 190 aa18.43■□□□□ 0.54
SHKBP1-225ENST00000600733 CLDN4O14493 209 aa18.43■□□□□ 0.54
SHKBP1-225ENST00000600733 PDCD5O14737 125 aa18.43■□□□□ 0.54
SHKBP1-225ENST00000600733 PEX14O75381 377 aa18.43■□□□□ 0.54
SHKBP1-225ENST00000600733 RAF1P04049 648 aa18.43■□□□□ 0.54
SHKBP1-225ENST00000600733 GRK6P43250 576 aa18.43■□□□□ 0.54
SHKBP1-225ENST00000600733 MRPS21P82921 87 aaKnown RBP18.43■□□□□ 0.54
SHKBP1-225ENST00000600733 FUT7Q11130 342 aa18.43■□□□□ 0.54
SHKBP1-225ENST00000600733 ISXQ2M1V0 245 aa18.43■□□□□ 0.54
SHKBP1-225ENST00000600733 FAM122BQ7Z309 247 aa18.43■□□□□ 0.54
SHKBP1-225ENST00000600733 JAZF1Q86VZ6 243 aa18.43■□□□□ 0.54
SHKBP1-225ENST00000600733 ZNF615Q8N8J6 731 aa18.43■□□□□ 0.54
SHKBP1-225ENST00000600733 LSM14AQ8ND56 463 aaKnown RBP18.43■□□□□ 0.54
SHKBP1-225ENST00000600733 ZDHHC1Q8WTX9 485 aa18.43■□□□□ 0.54
SHKBP1-225ENST00000600733 ZNF524Q96C55 264 aa18.43■□□□□ 0.54
SHKBP1-225ENST00000600733 CMTM3Q96MX0 182 aa18.43■□□□□ 0.54
SHKBP1-225ENST00000600733 ACTR6Q9GZN1 396 aa18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms