RNA–Protein interactions for RNA: ENST00000600320.5

SHKBP1-222, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 913 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-222ENST00000600320 CDK20Q8IZL9 346 aa17.82■□□□□ 0.44
SHKBP1-222ENST00000600320 PQLC1Q8N2U9 271 aa17.82■□□□□ 0.44
SHKBP1-222ENST00000600320 SLC43A2Q8N370 569 aa17.82■□□□□ 0.44
SHKBP1-222ENST00000600320 OR5K1Q8NHB7 308 aa17.82■□□□□ 0.44
SHKBP1-222ENST00000600320 MOSPD2Q8NHP6 518 aa17.82■□□□□ 0.44
SHKBP1-222ENST00000600320 CENPNQ96H22 339 aaPredicted RBP17.82■□□□□ 0.44
SHKBP1-222ENST00000600320 CCDC120Q96HB5 630 aa17.82■□□□□ 0.44
SHKBP1-222ENST00000600320 Q9UFV3 132 aa17.82■□□□□ 0.44
SHKBP1-222ENST00000600320 IL2RAP01589 272 aa17.81■□□□□ 0.44
SHKBP1-222ENST00000600320 HIST1H2ABP04908 130 aa17.81■□□□□ 0.44
SHKBP1-222ENST00000600320 TSPAN19P0C672 248 aa17.81■□□□□ 0.44
SHKBP1-222ENST00000600320 TMIGD3P0DMS9 266 aaPredicted RBP17.81■□□□□ 0.44
SHKBP1-222ENST00000600320 HLA-DOBP13765 273 aa17.81■□□□□ 0.44
SHKBP1-222ENST00000600320 POU2F1P14859 743 aa17.81■□□□□ 0.44
SHKBP1-222ENST00000600320 ZNF26P17031 533 aaPredicted RBP17.81■□□□□ 0.44
SHKBP1-222ENST00000600320 UQCRC1P31930 480 aa17.81■□□□□ 0.44
SHKBP1-222ENST00000600320 IFNGR2P38484 337 aa17.81■□□□□ 0.44
SHKBP1-222ENST00000600320 AQP2P41181 271 aa17.81■□□□□ 0.44
SHKBP1-222ENST00000600320 SLC16A1P53985 500 aa17.81■□□□□ 0.44
SHKBP1-222ENST00000600320 RPS4XP62701 263 aaKnown RBP17.81■□□□□ 0.44
SHKBP1-222ENST00000600320 RPL18Q07020 188 aaKnown RBP17.81■□□□□ 0.44
SHKBP1-222ENST00000600320 PDK3Q15120 406 aa17.81■□□□□ 0.44
SHKBP1-222ENST00000600320 RNPS1Q15287 305 aaKnown RBP17.81■□□□□ 0.44
SHKBP1-222ENST00000600320 TMEM225Q6GV28 225 aa17.81■□□□□ 0.44
SHKBP1-222ENST00000600320 HIST3H2AQ7L7L0 130 aa17.81■□□□□ 0.44
SHKBP1-222ENST00000600320 CCDC71Q8IV32 467 aaPredicted RBP17.81■□□□□ 0.44
SHKBP1-222ENST00000600320 MCEMP1Q8IX19 187 aa17.81■□□□□ 0.44
SHKBP1-222ENST00000600320 TUSC5Q8IXB3 177 aa17.81■□□□□ 0.44
SHKBP1-222ENST00000600320 LINC00471Q8N535 108 aa17.81■□□□□ 0.44
SHKBP1-222ENST00000600320 ICA1LQ8NDH6 482 aa17.81■□□□□ 0.44
SHKBP1-222ENST00000600320 OR51A7Q8NH64 312 aa17.81■□□□□ 0.44
SHKBP1-222ENST00000600320 HIST1H2ACQ93077 130 aa17.81■□□□□ 0.44
SHKBP1-222ENST00000600320 ZNF775Q96BV0 537 aaPredicted RBP17.81■□□□□ 0.44
SHKBP1-222ENST00000600320 NRBF2Q96F24 287 aa17.81■□□□□ 0.44
SHKBP1-222ENST00000600320 TNFRSF13CQ96RJ3 184 aa17.81■□□□□ 0.44
SHKBP1-222ENST00000600320 FEVQ99581 238 aa17.81■□□□□ 0.44
SHKBP1-222ENST00000600320 MCCC2Q9HCC0 563 aa17.81■□□□□ 0.44
SHKBP1-222ENST00000600320 KRCC1Q9NPI7 259 aaPredicted RBP17.81■□□□□ 0.44
SHKBP1-222ENST00000600320 KLHL9Q9P2J3 617 aa17.81■□□□□ 0.44
SHKBP1-222ENST00000600320 ERRFI1Q9UJM3 462 aaPredicted RBP17.81■□□□□ 0.44
SHKBP1-222ENST00000600320 RASD1Q9Y272 281 aa17.81■□□□□ 0.44
SHKBP1-222ENST00000600320 HIF3AQ9Y2N7 669 aa17.81■□□□□ 0.44
SHKBP1-222ENST00000600320 RP1L1Q8IWN7 2480 aaPredicted RBP17.81■□□□□ 0.44
SHKBP1-222ENST00000600320 PRRC2CQ9Y520 2896 aaKnown RBP17.81■□□□□ 0.44
SHKBP1-222ENST00000600320 IGKV3D-15A0A087WSY6 115 aa17.8■□□□□ 0.44
SHKBP1-222ENST00000600320 A0A1W2PNV4 684 aa17.8■□□□□ 0.44
SHKBP1-222ENST00000600320 ARRDC5A6NEK1 342 aa17.8■□□□□ 0.44
SHKBP1-222ENST00000600320 UNC119BA6NIH7 251 aa17.8■□□□□ 0.44
SHKBP1-222ENST00000600320 SAC3D1A6NKF1 404 aa17.8■□□□□ 0.44
SHKBP1-222ENST00000600320 C11orf98E9PRG8 122 aa17.8■□□□□ 0.44
SHKBP1-222ENST00000600320 BLOC1S5-TXNDC5H3BN57 136 aa17.8■□□□□ 0.44
SHKBP1-222ENST00000600320 J3QKU1 62 aa17.8■□□□□ 0.44
SHKBP1-222ENST00000600320 SS18L1O75177 396 aaPredicted RBP17.8■□□□□ 0.44
SHKBP1-222ENST00000600320 PTP4A3O75365 173 aa17.8■□□□□ 0.44
SHKBP1-222ENST00000600320 BAG2O95816 211 aa17.8■□□□□ 0.44
SHKBP1-222ENST00000600320 ADORA3P0DMS8 318 aa17.8■□□□□ 0.44
SHKBP1-222ENST00000600320 FPR3P25089 353 aa17.8■□□□□ 0.44
SHKBP1-222ENST00000600320 NTF4P34130 210 aa17.8■□□□□ 0.44
SHKBP1-222ENST00000600320 KIR2DL2P43627 348 aaPredicted RBP17.8■□□□□ 0.44
SHKBP1-222ENST00000600320 PER3P56645 1201 aa17.8■□□□□ 0.44
SHKBP1-222ENST00000600320 SIRPAP78324 504 aa17.8■□□□□ 0.44
SHKBP1-222ENST00000600320 PUDPQ08623 228 aa17.8■□□□□ 0.44
SHKBP1-222ENST00000600320 ZP4Q12836 540 aa17.8■□□□□ 0.44
SHKBP1-222ENST00000600320 RCN1Q15293 331 aa17.8■□□□□ 0.44
SHKBP1-222ENST00000600320 OR2A2Q6IF42 318 aa17.8■□□□□ 0.44
SHKBP1-222ENST00000600320 NHLRC1Q6VVB1 395 aa17.8■□□□□ 0.44
SHKBP1-222ENST00000600320 OAFQ86UD1 273 aa17.8■□□□□ 0.44
SHKBP1-222ENST00000600320 GPAT4Q86UL3 456 aa17.8■□□□□ 0.44
SHKBP1-222ENST00000600320 EPHX4Q8IUS5 362 aa17.8■□□□□ 0.44
SHKBP1-222ENST00000600320 LRRC75AQ8NAA5 344 aa17.8■□□□□ 0.44
SHKBP1-222ENST00000600320 OR9K2Q8NGE7 335 aa17.8■□□□□ 0.44
SHKBP1-222ENST00000600320 RND1Q92730 232 aa17.8■□□□□ 0.44
SHKBP1-222ENST00000600320 GTPBP3Q969Y2 492 aaKnown RBP17.8■□□□□ 0.44
SHKBP1-222ENST00000600320 GMPPAQ96IJ6 420 aaPredicted RBP17.8■□□□□ 0.44
SHKBP1-222ENST00000600320 OXGR1Q96P68 337 aa17.8■□□□□ 0.44
SHKBP1-222ENST00000600320 NIPSNAP1Q9BPW8 284 aa17.8■□□□□ 0.44
SHKBP1-222ENST00000600320 SF3B5Q9BWJ5 86 aaKnown RBP17.8■□□□□ 0.44
SHKBP1-222ENST00000600320 BCO1Q9HAY6 547 aa17.8■□□□□ 0.44
SHKBP1-222ENST00000600320 RNF6Q9Y252 685 aa17.8■□□□□ 0.44
SHKBP1-222ENST00000600320 SIGLEC7Q9Y286 467 aa17.8■□□□□ 0.44
SHKBP1-222ENST00000600320 SLC5A6Q9Y289 635 aa17.8■□□□□ 0.44
SHKBP1-222ENST00000600320 FLVCR1Q9Y5Y0 555 aa17.8■□□□□ 0.44
SHKBP1-222ENST00000600320 TNFSF13O75888 250 aa17.79■□□□□ 0.44
SHKBP1-222ENST00000600320 OR6A2O95222 327 aa17.79■□□□□ 0.44
SHKBP1-222ENST00000600320 ZNF23P17027 643 aa17.79■□□□□ 0.44
SHKBP1-222ENST00000600320 AHCYP23526 432 aa17.79■□□□□ 0.44
SHKBP1-222ENST00000600320 AGTR1P30556 359 aa17.79■□□□□ 0.44
SHKBP1-222ENST00000600320 SLC9A3P48764 834 aa17.79■□□□□ 0.44
SHKBP1-222ENST00000600320 FXYD6P3P58550 94 aa17.79■□□□□ 0.44
SHKBP1-222ENST00000600320 IL1RL1Q01638 556 aa17.79■□□□□ 0.44
SHKBP1-222ENST00000600320 TSPAN31Q12999 210 aa17.79■□□□□ 0.44
SHKBP1-222ENST00000600320 POU4F3Q15319 338 aa17.79■□□□□ 0.44
SHKBP1-222ENST00000600320 ZBED5Q49AG3 693 aa17.79■□□□□ 0.44
SHKBP1-222ENST00000600320 GTF2IRD2BQ6EKJ0 949 aa17.79■□□□□ 0.44
SHKBP1-222ENST00000600320 NUFIP2Q7Z417 695 aaKnown RBP17.79■□□□□ 0.44
SHKBP1-222ENST00000600320 GTF2IRD2Q86UP8 949 aa17.79■□□□□ 0.44
SHKBP1-222ENST00000600320 LIX1LQ8IVB5 337 aa17.79■□□□□ 0.44
SHKBP1-222ENST00000600320 ZIC4Q8N9L1 334 aa17.79■□□□□ 0.44
SHKBP1-222ENST00000600320 ZFP3Q96NJ6 502 aa17.79■□□□□ 0.44
SHKBP1-222ENST00000600320 ZNF385AQ96PM9 386 aaKnown RBP17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms