RNA–Protein interactions for RNA: ENST00000600137.5

VRK3-219, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 822 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-219ENST00000600137 B3GALT5Q9Y2C3 310 aa12.19□□□□□ -0.46
VRK3-219ENST00000600137 CORINQ9Y5Q5 1042 aa12.19□□□□□ -0.46
VRK3-219ENST00000600137 PRR14LQ5THK1 2151 aa12.19□□□□□ -0.46
VRK3-219ENST00000600137 TRBV4-1A0A0J9YWV2 114 aa12.18□□□□□ -0.46
VRK3-219ENST00000600137 VAMP5O95183 116 aa12.18□□□□□ -0.46
VRK3-219ENST00000600137 PLGP00747 810 aaPredicted RBP12.18□□□□□ -0.46
VRK3-219ENST00000600137 MT-ATP6P00846 226 aa12.18□□□□□ -0.46
VRK3-219ENST00000600137 FABP3P05413 133 aa12.18□□□□□ -0.46
VRK3-219ENST00000600137 H1F0P07305 194 aaKnown RBP12.18□□□□□ -0.46
VRK3-219ENST00000600137 HLA-DOBP13765 273 aa12.18□□□□□ -0.46
VRK3-219ENST00000600137 FUT1P19526 365 aa12.18□□□□□ -0.46
VRK3-219ENST00000600137 MAKP20794 623 aa12.18□□□□□ -0.46
VRK3-219ENST00000600137 OR3A2P47893 321 aa12.18□□□□□ -0.46
VRK3-219ENST00000600137 PCYT1AP49585 367 aa12.18□□□□□ -0.46
VRK3-219ENST00000600137 PRKCDQ05655 676 aa12.18□□□□□ -0.46
VRK3-219ENST00000600137 ZP4Q12836 540 aa12.18□□□□□ -0.46
VRK3-219ENST00000600137 MFSD13AQ14CX5 517 aa12.18□□□□□ -0.46
VRK3-219ENST00000600137 TMEM201Q5SNT2 666 aa12.18□□□□□ -0.46
VRK3-219ENST00000600137 SP5Q6BEB4 398 aaPredicted RBP12.18□□□□□ -0.46
VRK3-219ENST00000600137 HIST2H2BCQ6DN03 193 aa12.18□□□□□ -0.46
VRK3-219ENST00000600137 PODNL1Q6PEZ8 512 aa12.18□□□□□ -0.46
VRK3-219ENST00000600137 GALNT5Q7Z7M9 940 aa12.18□□□□□ -0.46
VRK3-219ENST00000600137 LUZP2Q86TE4 346 aa12.18□□□□□ -0.46
VRK3-219ENST00000600137 MEX3DQ86XN8 651 aaKnown RBP12.18□□□□□ -0.46
VRK3-219ENST00000600137 NRMQ8IXM6 262 aa12.18□□□□□ -0.46
VRK3-219ENST00000600137 RNF113BQ8IZP6 322 aaKnown RBP12.18□□□□□ -0.46
VRK3-219ENST00000600137 PAPD5Q8NDF8 572 aaKnown RBP12.18□□□□□ -0.46
VRK3-219ENST00000600137 OR5J2Q8NH18 312 aa12.18□□□□□ -0.46
VRK3-219ENST00000600137 OXGR1Q96P68 337 aa12.18□□□□□ -0.46
VRK3-219ENST00000600137 C12orf49Q9H741 205 aa12.18□□□□□ -0.46
VRK3-219ENST00000600137 FKRPQ9H9S5 495 aa12.18□□□□□ -0.46
VRK3-219ENST00000600137 VNN3Q9NY84 501 aa12.18□□□□□ -0.46
VRK3-219ENST00000600137 RASD1Q9Y272 281 aa12.18□□□□□ -0.46
VRK3-219ENST00000600137 EMC9Q9Y3B6 208 aa12.18□□□□□ -0.46
VRK3-219ENST00000600137 MED31Q9Y3C7 131 aa12.18□□□□□ -0.46
VRK3-219ENST00000600137 TESMINQ9Y4I5 508 aa12.18□□□□□ -0.46
VRK3-219ENST00000600137 SETXQ7Z333 2677 aaKnown RBP12.17□□□□□ -0.46
VRK3-219ENST00000600137 PRSS44E7EML9 344 aa12.17□□□□□ -0.46
VRK3-219ENST00000600137 GPR171O14626 319 aa12.17□□□□□ -0.46
VRK3-219ENST00000600137 TRAF3IP2O43734 574 aaPredicted RBP12.17□□□□□ -0.46
VRK3-219ENST00000600137 OR7A10O76100 309 aa12.17□□□□□ -0.46
VRK3-219ENST00000600137 ZNF432O94892 652 aa12.17□□□□□ -0.46
VRK3-219ENST00000600137 UMPSP11172 480 aa12.17□□□□□ -0.46
VRK3-219ENST00000600137 ITGA2P17301 1181 aa12.17□□□□□ -0.46
VRK3-219ENST00000600137 FAM27E3Q08E93 113 aa12.17□□□□□ -0.46
VRK3-219ENST00000600137 FLOT2Q14254 428 aa12.17□□□□□ -0.46
VRK3-219ENST00000600137 TMEM225Q6GV28 225 aa12.17□□□□□ -0.46
VRK3-219ENST00000600137 MBOAT2Q6ZWT7 520 aa12.17□□□□□ -0.46
VRK3-219ENST00000600137 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.17□□□□□ -0.46
VRK3-219ENST00000600137 CYP4Z1Q86W10 505 aa12.17□□□□□ -0.46
VRK3-219ENST00000600137 GABRG1Q8N1C3 465 aa12.17□□□□□ -0.46
VRK3-219ENST00000600137 OR4C15Q8NGM1 316 aa12.17□□□□□ -0.46
VRK3-219ENST00000600137 RNASE6Q93091 150 aaKnown RBP12.17□□□□□ -0.46
VRK3-219ENST00000600137 MCUR1Q96AQ8 359 aa12.17□□□□□ -0.46
VRK3-219ENST00000600137 TMEM45BQ96B21 275 aa12.17□□□□□ -0.46
VRK3-219ENST00000600137 SGTBQ96EQ0 304 aa12.17□□□□□ -0.46
VRK3-219ENST00000600137 ZNF347Q96SE7 839 aa12.17□□□□□ -0.46
VRK3-219ENST00000600137 GPA33Q99795 319 aa12.17□□□□□ -0.46
VRK3-219ENST00000600137 TACO1Q9BSH4 297 aaKnown RBP12.17□□□□□ -0.46
VRK3-219ENST00000600137 CHID1Q9BWS9 393 aa12.17□□□□□ -0.46
VRK3-219ENST00000600137 PRSS50Q9UI38 385 aa12.17□□□□□ -0.46
VRK3-219ENST00000600137 ZNF229Q9UJW7 825 aa12.17□□□□□ -0.46
VRK3-219ENST00000600137 PROCRQ9UNN8 238 aa12.17□□□□□ -0.46
VRK3-219ENST00000600137 FAM32AQ9Y421 112 aaKnown RBP12.17□□□□□ -0.46
VRK3-219ENST00000600137 ANKHD1Q8IWZ3 2542 aaKnown RBP12.17□□□□□ -0.46
VRK3-219ENST00000600137 UNC79Q9P2D8 2635 aa12.16□□□□□ -0.46
VRK3-219ENST00000600137 DHRS12A0PJE2 317 aa12.16□□□□□ -0.46
VRK3-219ENST00000600137 SH3PXD2BA1X283 911 aa12.16□□□□□ -0.46
VRK3-219ENST00000600137 HTR3EA5X5Y0 456 aa12.16□□□□□ -0.46
VRK3-219ENST00000600137 EEF1E1-BLOC1S5C9J1V9 151 aa12.16□□□□□ -0.46
VRK3-219ENST00000600137 CDC42EP2O14613 210 aa12.16□□□□□ -0.46
VRK3-219ENST00000600137 EEF1E1O43324 174 aaKnown RBP12.16□□□□□ -0.46
VRK3-219ENST00000600137 KLF4O43474 513 aa12.16□□□□□ -0.46
VRK3-219ENST00000600137 SMNDC1O75940 238 aaKnown RBP eCLIP12.16□□□□□ -0.46
VRK3-219ENST00000600137 RAP2AP10114 183 aa12.16□□□□□ -0.46
VRK3-219ENST00000600137 IFI30P13284 250 aa12.16□□□□□ -0.46
VRK3-219ENST00000600137 ZNF26P17031 533 aaPredicted RBP12.16□□□□□ -0.46
VRK3-219ENST00000600137 RRM2P31350 389 aa12.16□□□□□ -0.46
VRK3-219ENST00000600137 UQCRC1P31930 480 aa12.16□□□□□ -0.46
VRK3-219ENST00000600137 IFNA8P32881 189 aa12.16□□□□□ -0.46
VRK3-219ENST00000600137 OMPP47874 163 aa12.16□□□□□ -0.46
VRK3-219ENST00000600137 FOXG1P55316 489 aaPredicted RBP12.16□□□□□ -0.46
VRK3-219ENST00000600137 CHRNB3Q05901 458 aa12.16□□□□□ -0.46
VRK3-219ENST00000600137 PMS2P3Q13401 168 aa12.16□□□□□ -0.46
VRK3-219ENST00000600137 CCNIQ14094 377 aa12.16□□□□□ -0.46
VRK3-219ENST00000600137 C22orf34Q6ZV56 151 aa12.16□□□□□ -0.46
VRK3-219ENST00000600137 TMPRSS11FQ6ZWK6 438 aa12.16□□□□□ -0.46
VRK3-219ENST00000600137 ZER1Q7Z7L7 766 aa12.16□□□□□ -0.46
VRK3-219ENST00000600137 LRRC75AQ8NAA5 344 aa12.16□□□□□ -0.46
VRK3-219ENST00000600137 OR52J3Q8NH60 311 aa12.16□□□□□ -0.46
VRK3-219ENST00000600137 POP5Q969H6 163 aaKnown RBP12.16□□□□□ -0.46
VRK3-219ENST00000600137 BPIFA2Q96DR5 249 aa12.16□□□□□ -0.46
VRK3-219ENST00000600137 TXNDC15Q96J42 360 aa12.16□□□□□ -0.46
VRK3-219ENST00000600137 LRGUKQ96M69 825 aa12.16□□□□□ -0.46
VRK3-219ENST00000600137 RBM24Q9BX46 236 aaKnown RBP12.16□□□□□ -0.46
VRK3-219ENST00000600137 KLHL4Q9C0H6 718 aa12.16□□□□□ -0.46
VRK3-219ENST00000600137 NANSQ9NR45 359 aa12.16□□□□□ -0.46
VRK3-219ENST00000600137 CCM2LQ9NUG4 571 aaPredicted RBP12.16□□□□□ -0.46
VRK3-219ENST00000600137 GALNT8Q9NY28 637 aa12.16□□□□□ -0.46
VRK3-219ENST00000600137 EMC3Q9P0I2 261 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms