RNA–Protein interactions for RNA: ENST00000599833.1

SHKBP1-221, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 761 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-221ENST00000599833 DAZAP2Q15038 168 aaPredicted RBP17.23■□□□□ 0.35
SHKBP1-221ENST00000599833 TTC33Q6PID6 262 aaPredicted RBP17.23■□□□□ 0.35
SHKBP1-221ENST00000599833 SEZ6L2Q6UXD5 910 aa17.23■□□□□ 0.35
SHKBP1-221ENST00000599833 CXorf67Q86X51 503 aaPredicted RBP17.23■□□□□ 0.35
SHKBP1-221ENST00000599833 LRRC17Q8N6Y2 441 aa17.23■□□□□ 0.35
SHKBP1-221ENST00000599833 SCAIQ8N9R8 606 aa17.23■□□□□ 0.35
SHKBP1-221ENST00000599833 RNF217Q8TC41 542 aa17.23■□□□□ 0.35
SHKBP1-221ENST00000599833 DACH2Q96NX9 599 aa17.23■□□□□ 0.35
SHKBP1-221ENST00000599833 EPYCQ99645 322 aa17.23■□□□□ 0.35
SHKBP1-221ENST00000599833 C20orf141Q9NUB4 165 aa17.23■□□□□ 0.35
SHKBP1-221ENST00000599833 NDUFAF4Q9P032 175 aa17.23■□□□□ 0.35
SHKBP1-221ENST00000599833 MALT1Q9UDY8 824 aa17.23■□□□□ 0.35
SHKBP1-221ENST00000599833 RPS6KA6Q9UK32 745 aa17.23■□□□□ 0.35
SHKBP1-221ENST00000599833 ENPP4Q9Y6X5 453 aa17.23■□□□□ 0.35
SHKBP1-221ENST00000599833 SPG11Q96JI7 2443 aa17.23■□□□□ 0.35
SHKBP1-221ENST00000599833 TCRBV5S2A0A599 114 aa17.22■□□□□ 0.35
SHKBP1-221ENST00000599833 SH3D21A4FU49 640 aa17.22■□□□□ 0.35
SHKBP1-221ENST00000599833 ZNF432O94892 652 aa17.22■□□□□ 0.35
SHKBP1-221ENST00000599833 CNOT4O95628 575 aaKnown RBP17.22■□□□□ 0.35
SHKBP1-221ENST00000599833 ADAP00813 363 aa17.22■□□□□ 0.35
SHKBP1-221ENST00000599833 ASAH2BP0C7U1 165 aa17.22■□□□□ 0.35
SHKBP1-221ENST00000599833 EPXP11678 715 aa17.22■□□□□ 0.35
SHKBP1-221ENST00000599833 HLA-DOBP13765 273 aa17.22■□□□□ 0.35
SHKBP1-221ENST00000599833 IGHV1-2P23083 117 aa17.22■□□□□ 0.35
SHKBP1-221ENST00000599833 TSC22D1Q15714 1073 aa17.22■□□□□ 0.35
SHKBP1-221ENST00000599833 H1FNTQ75WM6 255 aaPredicted RBP17.22■□□□□ 0.35
SHKBP1-221ENST00000599833 LINGO2Q7L985 606 aa17.22■□□□□ 0.35
SHKBP1-221ENST00000599833 GPAT4Q86UL3 456 aa17.22■□□□□ 0.35
SHKBP1-221ENST00000599833 ARHGAP24Q8N264 748 aa17.22■□□□□ 0.35
SHKBP1-221ENST00000599833 TMEM239Q8WW34 195 aa17.22■□□□□ 0.35
SHKBP1-221ENST00000599833 LIPHQ8WWY8 451 aa17.22■□□□□ 0.35
SHKBP1-221ENST00000599833 CLPTM1LQ96KA5 538 aa17.22■□□□□ 0.35
SHKBP1-221ENST00000599833 DHRS1Q96LJ7 313 aa17.22■□□□□ 0.35
SHKBP1-221ENST00000599833 TAS2R5Q9NYW4 299 aa17.22■□□□□ 0.35
SHKBP1-221ENST00000599833 RHCGQ9UBD6 479 aa17.22■□□□□ 0.35
SHKBP1-221ENST00000599833 PRPF19Q9UMS4 504 aaKnown RBP17.22■□□□□ 0.35
SHKBP1-221ENST00000599833 SAMD4AQ9UPU9 718 aaKnown RBP17.22■□□□□ 0.35
SHKBP1-221ENST00000599833 CORINQ9Y5Q5 1042 aa17.22■□□□□ 0.35
SHKBP1-221ENST00000599833 KPNA4O00629 521 aaPredicted RBP17.21■□□□□ 0.35
SHKBP1-221ENST00000599833 PLPP3O14495 311 aa17.21■□□□□ 0.35
SHKBP1-221ENST00000599833 PIP5K1CO60331 668 aa17.21■□□□□ 0.35
SHKBP1-221ENST00000599833 PDE5AO76074 875 aa17.21■□□□□ 0.35
SHKBP1-221ENST00000599833 MT-ATP6P00846 226 aa17.21■□□□□ 0.35
SHKBP1-221ENST00000599833 IGHV3-9P01782 118 aa17.21■□□□□ 0.35
SHKBP1-221ENST00000599833 MT-ND1P03886 318 aa17.21■□□□□ 0.35
SHKBP1-221ENST00000599833 LOXP28300 417 aaPredicted RBP17.21■□□□□ 0.35
SHKBP1-221ENST00000599833 TLE4Q04727 773 aa17.21■□□□□ 0.35
SHKBP1-221ENST00000599833 MFSD13AQ14CX5 517 aa17.21■□□□□ 0.35
SHKBP1-221ENST00000599833 SFRP5Q5T4F7 317 aa17.21■□□□□ 0.35
SHKBP1-221ENST00000599833 TSPO2Q5TGU0 170 aa17.21■□□□□ 0.35
SHKBP1-221ENST00000599833 FBXW9Q5XUX1 488 aa17.21■□□□□ 0.35
SHKBP1-221ENST00000599833 TMEM225Q6GV28 225 aa17.21■□□□□ 0.35
SHKBP1-221ENST00000599833 PGM2L1Q6PCE3 622 aa17.21■□□□□ 0.35
SHKBP1-221ENST00000599833 STK32CQ86UX6 486 aa17.21■□□□□ 0.35
SHKBP1-221ENST00000599833 PIK3C3Q8NEB9 887 aa17.21■□□□□ 0.35
SHKBP1-221ENST00000599833 APH1AQ96BI3 265 aa17.21■□□□□ 0.35
SHKBP1-221ENST00000599833 PYURFQ96I23 114 aa17.21■□□□□ 0.35
SHKBP1-221ENST00000599833 OXGR1Q96P68 337 aa17.21■□□□□ 0.35
SHKBP1-221ENST00000599833 FUZQ9BT04 418 aa17.21■□□□□ 0.35
SHKBP1-221ENST00000599833 KLHL4Q9C0H6 718 aa17.21■□□□□ 0.35
SHKBP1-221ENST00000599833 OR10A4Q9H209 315 aa17.21■□□□□ 0.35
SHKBP1-221ENST00000599833 FKRPQ9H9S5 495 aa17.21■□□□□ 0.35
SHKBP1-221ENST00000599833 SLC24A3Q9HC58 644 aa17.21■□□□□ 0.35
SHKBP1-221ENST00000599833 SLC7A10Q9NS82 523 aa17.21■□□□□ 0.35
SHKBP1-221ENST00000599833 ACTR3BQ9P1U1 418 aa17.21■□□□□ 0.35
SHKBP1-221ENST00000599833 GPR52Q9Y2T5 361 aa17.21■□□□□ 0.35
SHKBP1-221ENST00000599833 AKAP6Q13023 2319 aa17.2■□□□□ 0.34
SHKBP1-221ENST00000599833 A0A1W2PPR1 153 aa17.2■□□□□ 0.34
SHKBP1-221ENST00000599833 A6NNC1 897 aa17.2■□□□□ 0.34
SHKBP1-221ENST00000599833 ENO4A6NNW6 628 aa17.2■□□□□ 0.34
SHKBP1-221ENST00000599833 ACOT8O14734 319 aa17.2■□□□□ 0.34
SHKBP1-221ENST00000599833 MRPL33O75394 65 aaKnown RBP17.2■□□□□ 0.34
SHKBP1-221ENST00000599833 CTAG2O75638 210 aa17.2■□□□□ 0.34
SHKBP1-221ENST00000599833 CH25HO95992 272 aa17.2■□□□□ 0.34
SHKBP1-221ENST00000599833 ITGA5P08648 1049 aa17.2■□□□□ 0.34
SHKBP1-221ENST00000599833 SSTR2P30874 369 aa17.2■□□□□ 0.34
SHKBP1-221ENST00000599833 SELENOPP49908 381 aa17.2■□□□□ 0.34
SHKBP1-221ENST00000599833 LGALS3BPQ08380 585 aa17.2■□□□□ 0.34
SHKBP1-221ENST00000599833 ST3GAL3Q11203 375 aa17.2■□□□□ 0.34
SHKBP1-221ENST00000599833 BNIP1Q12981 228 aa17.2■□□□□ 0.34
SHKBP1-221ENST00000599833 ITGADQ13349 1161 aa17.2■□□□□ 0.34
SHKBP1-221ENST00000599833 FHL1Q13642 323 aa17.2■□□□□ 0.34
SHKBP1-221ENST00000599833 P2RY6Q15077 328 aa17.2■□□□□ 0.34
SHKBP1-221ENST00000599833 ANKRD34AQ69YU3 496 aa17.2■□□□□ 0.34
SHKBP1-221ENST00000599833 LCN8Q6JVE9 175 aa17.2■□□□□ 0.34
SHKBP1-221ENST00000599833 CASP12Q6UXS9 341 aa17.2■□□□□ 0.34
SHKBP1-221ENST00000599833 FKBP9P1Q75LS8 142 aa17.2■□□□□ 0.34
SHKBP1-221ENST00000599833 ZNF433Q8N7K0 673 aaPredicted RBP17.2■□□□□ 0.34
SHKBP1-221ENST00000599833 OR5J2Q8NH18 312 aa17.2■□□□□ 0.34
SHKBP1-221ENST00000599833 NSMCE2Q96MF7 247 aa17.2■□□□□ 0.34
SHKBP1-221ENST00000599833 MCCC2Q9HCC0 563 aa17.2■□□□□ 0.34
SHKBP1-221ENST00000599833 ZNF229Q9UJW7 825 aa17.2■□□□□ 0.34
SHKBP1-221ENST00000599833 ZNF469Q96JG9 3925 aaPredicted RBP17.19■□□□□ 0.34
SHKBP1-221ENST00000599833 A0A087WUU8 490 aa17.19■□□□□ 0.34
SHKBP1-221ENST00000599833 DEFB108AA8MXU0 73 aa17.19■□□□□ 0.34
SHKBP1-221ENST00000599833 ZP4Q12836 540 aa17.19■□□□□ 0.34
SHKBP1-221ENST00000599833 TMEM123Q8N131 208 aa17.19■□□□□ 0.34
SHKBP1-221ENST00000599833 ACTR6Q9GZN1 396 aa17.19■□□□□ 0.34
SHKBP1-221ENST00000599833 NMNAT1Q9HAN9 279 aaPredicted RBP17.19■□□□□ 0.34
SHKBP1-221ENST00000599833 V9GYQ6 96 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms