RNA–Protein interactions for RNA: ENST00000599543.3

PNKP-213, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 986 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-213ENST00000599543 GID8Q9NWU2 228 aa16.44■□□□□ 0.22
PNKP-213ENST00000599543 B3GALT5Q9Y2C3 310 aa16.44■□□□□ 0.22
PNKP-213ENST00000599543 AMDHD2Q9Y303 409 aa16.44■□□□□ 0.22
PNKP-213ENST00000599543 LIPT2A6NK58 231 aa16.43■□□□□ 0.22
PNKP-213ENST00000599543 SSX4O60224 188 aa16.43■□□□□ 0.22
PNKP-213ENST00000599543 TPST1O60507 370 aa16.43■□□□□ 0.22
PNKP-213ENST00000599543 SHOX2O60902 331 aaPredicted RBP16.43■□□□□ 0.22
PNKP-213ENST00000599543 AKR7A3O95154 331 aa16.43■□□□□ 0.22
PNKP-213ENST00000599543 SLC6A2P23975 617 aa16.43■□□□□ 0.22
PNKP-213ENST00000599543 NUDT6P53370 316 aa16.43■□□□□ 0.22
PNKP-213ENST00000599543 HOXC5Q00444 222 aa16.43■□□□□ 0.22
PNKP-213ENST00000599543 CEACAM7Q14002 265 aa16.43■□□□□ 0.22
PNKP-213ENST00000599543 LARS2Q15031 903 aaKnown RBP16.43■□□□□ 0.22
PNKP-213ENST00000599543 TSPO2Q5TGU0 170 aa16.43■□□□□ 0.22
PNKP-213ENST00000599543 RNF220Q5VTB9 566 aa16.43■□□□□ 0.22
PNKP-213ENST00000599543 WBP2NLQ6ICG8 309 aa16.43■□□□□ 0.22
PNKP-213ENST00000599543 DNM1P46Q6ZS02 220 aa16.43■□□□□ 0.22
PNKP-213ENST00000599543 GPAT4Q86UL3 456 aa16.43■□□□□ 0.22
PNKP-213ENST00000599543 TMEM99Q8N816 258 aa16.43■□□□□ 0.22
PNKP-213ENST00000599543 C11orf65Q8NCR3 313 aa16.43■□□□□ 0.22
PNKP-213ENST00000599543 OR9K2Q8NGE7 335 aa16.43■□□□□ 0.22
PNKP-213ENST00000599543 TMEM45BQ96B21 275 aa16.43■□□□□ 0.22
PNKP-213ENST00000599543 TAPBPLQ9BX59 468 aa16.43■□□□□ 0.22
PNKP-213ENST00000599543 C1QTNF6Q9BXI9 259 aa16.43■□□□□ 0.22
PNKP-213ENST00000599543 AMBRA1Q9C0C7 1298 aa16.43■□□□□ 0.22
PNKP-213ENST00000599543 ARMC7Q9H6L4 198 aa16.43■□□□□ 0.22
PNKP-213ENST00000599543 ARL8BQ9NVJ2 186 aa16.43■□□□□ 0.22
PNKP-213ENST00000599543 PRDM4Q9UKN5 801 aa16.43■□□□□ 0.22
PNKP-213ENST00000599543 RTTNQ86VV8 2226 aa16.43■□□□□ 0.22
PNKP-213ENST00000599543 AQP7P3A6NL99 342 aa16.42■□□□□ 0.22
PNKP-213ENST00000599543 CRLF1O75462 422 aa16.42■□□□□ 0.22
PNKP-213ENST00000599543 FAM107AO95990 144 aa16.42■□□□□ 0.22
PNKP-213ENST00000599543 MPGP29372 298 aa16.42■□□□□ 0.22
PNKP-213ENST00000599543 ACAA2P42765 397 aaKnown RBP16.42■□□□□ 0.22
PNKP-213ENST00000599543 FABP6P51161 128 aa16.42■□□□□ 0.22
PNKP-213ENST00000599543 ZSWIM7Q19AV6 140 aa16.42■□□□□ 0.22
PNKP-213ENST00000599543 C11orf71Q6IPW1 123 aa16.42■□□□□ 0.22
PNKP-213ENST00000599543 KLHL24Q6TFL4 600 aa16.42■□□□□ 0.22
PNKP-213ENST00000599543 NET1Q7Z628 596 aaPredicted RBP16.42■□□□□ 0.22
PNKP-213ENST00000599543 POMGNT2Q8NAT1 580 aa16.42■□□□□ 0.22
PNKP-213ENST00000599543 SMYD1Q8NB12 490 aa16.42■□□□□ 0.22
PNKP-213ENST00000599543 HIPK4Q8NE63 616 aa16.42■□□□□ 0.22
PNKP-213ENST00000599543 ECSITQ9BQ95 431 aa16.42■□□□□ 0.22
PNKP-213ENST00000599543 RHNO1Q9BSD3 238 aa16.42■□□□□ 0.22
PNKP-213ENST00000599543 SF3B5Q9BWJ5 86 aaKnown RBP16.42■□□□□ 0.22
PNKP-213ENST00000599543 FKRPQ9H9S5 495 aa16.42■□□□□ 0.22
PNKP-213ENST00000599543 SLC17A5Q9NRA2 495 aa16.42■□□□□ 0.22
PNKP-213ENST00000599543 ADPRHL2Q9NX46 363 aa16.42■□□□□ 0.22
PNKP-213ENST00000599543 CMTM6Q9NX76 183 aa16.42■□□□□ 0.22
PNKP-213ENST00000599543 ZNF232Q9UNY5 417 aa16.42■□□□□ 0.22
PNKP-213ENST00000599543 ANGPT4Q9Y264 503 aa16.42■□□□□ 0.22
PNKP-213ENST00000599543 A8MVM7 634 aa16.41■□□□□ 0.22
PNKP-213ENST00000599543 KRT33AO76009 404 aa16.41■□□□□ 0.22
PNKP-213ENST00000599543 BNIP2Q12982 314 aa16.41■□□□□ 0.22
PNKP-213ENST00000599543 TMEM225Q6GV28 225 aa16.41■□□□□ 0.22
PNKP-213ENST00000599543 ZNF544Q6NX49 715 aa16.41■□□□□ 0.22
PNKP-213ENST00000599543 CLEC2AQ6UVW9 174 aa16.41■□□□□ 0.22
PNKP-213ENST00000599543 B3GLCTQ6Y288 498 aa16.41■□□□□ 0.22
PNKP-213ENST00000599543 AAED1Q7RTV5 226 aa16.41■□□□□ 0.22
PNKP-213ENST00000599543 ABHD12BQ7Z5M8 362 aaPredicted RBP16.41■□□□□ 0.22
PNKP-213ENST00000599543 SERPINA11Q86U17 422 aa16.41■□□□□ 0.22
PNKP-213ENST00000599543 CALHM3Q86XJ0 350 aa16.41■□□□□ 0.22
PNKP-213ENST00000599543 WDR31Q8NA23 367 aa16.41■□□□□ 0.22
PNKP-213ENST00000599543 OR8J3Q8NGG0 315 aa16.41■□□□□ 0.22
PNKP-213ENST00000599543 ZNF385AQ96PM9 386 aaKnown RBP16.41■□□□□ 0.22
PNKP-213ENST00000599543 PRR14Q9BWN1 585 aa16.41■□□□□ 0.22
PNKP-213ENST00000599543 SPATA9Q9BWV2 254 aa16.41■□□□□ 0.22
PNKP-213ENST00000599543 EFCAB1Q9HAE3 211 aa16.41■□□□□ 0.22
PNKP-213ENST00000599543 ATP23Q9Y6H3 246 aa16.41■□□□□ 0.22
PNKP-213ENST00000599543 CUBNO60494 3623 aa16.4■□□□□ 0.22
PNKP-213ENST00000599543 DCTN3O75935 186 aa16.4■□□□□ 0.22
PNKP-213ENST00000599543 WNT11O96014 354 aa16.4■□□□□ 0.22
PNKP-213ENST00000599543 CDH2P19022 906 aaPredicted RBP16.4■□□□□ 0.22
PNKP-213ENST00000599543 PCGF2P35227 344 aa16.4■□□□□ 0.22
PNKP-213ENST00000599543 SLC7A2P52569 658 aa16.4■□□□□ 0.22
PNKP-213ENST00000599543 PRPS1P60891 318 aa16.4■□□□□ 0.22
PNKP-213ENST00000599543 SLC25A3Q00325 362 aa16.4■□□□□ 0.22
PNKP-213ENST00000599543 RAB35Q15286 201 aa16.4■□□□□ 0.22
PNKP-213ENST00000599543 VMACQ2NL98 169 aa16.4■□□□□ 0.22
PNKP-213ENST00000599543 C1QTNF12Q5T7M4 302 aa16.4■□□□□ 0.22
PNKP-213ENST00000599543 GKAP1Q5VSY0 366 aaPredicted RBP16.4■□□□□ 0.22
PNKP-213ENST00000599543 PRAMEF8Q5VWM4 474 aa16.4■□□□□ 0.22
PNKP-213ENST00000599543 PRAMEF7Q5VXH5 474 aa16.4■□□□□ 0.22
PNKP-213ENST00000599543 KRT73Q86Y46 540 aa16.4■□□□□ 0.22
PNKP-213ENST00000599543 CCDC197Q8NCU1 140 aa16.4■□□□□ 0.22
PNKP-213ENST00000599543 CMTM5Q96DZ9 223 aa16.4■□□□□ 0.22
PNKP-213ENST00000599543 ZNF583Q96ND8 569 aa16.4■□□□□ 0.22
PNKP-213ENST00000599543 LRRC37BQ96QE4 947 aa16.4■□□□□ 0.22
PNKP-213ENST00000599543 WFDC6Q9BQY6 131 aa16.4■□□□□ 0.22
PNKP-213ENST00000599543 IFT52Q9Y366 437 aa16.4■□□□□ 0.22
PNKP-213ENST00000599543 ANK3Q12955 4377 aaKnown RBP16.39■□□□□ 0.21
PNKP-213ENST00000599543 MXRA5Q9NR99 2828 aa16.39■□□□□ 0.21
PNKP-213ENST00000599543 ARFGEF3Q5TH69 2177 aa16.39■□□□□ 0.21
PNKP-213ENST00000599543 IGHV4-30-2A0A087WSY4 118 aa16.39■□□□□ 0.21
PNKP-213ENST00000599543 NME4O00746 187 aa16.39■□□□□ 0.21
PNKP-213ENST00000599543 TLX2O43763 284 aaPredicted RBP16.39■□□□□ 0.21
PNKP-213ENST00000599543 CD5LO43866 347 aa16.39■□□□□ 0.21
PNKP-213ENST00000599543 VAMP5O95183 116 aa16.39■□□□□ 0.21
PNKP-213ENST00000599543 NPPAP01160 153 aa16.39■□□□□ 0.21
PNKP-213ENST00000599543 BMP4P12644 408 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms