RNA–Protein interactions for RNA: ENST00000597618.5

TRIM28-210, Transcript of tripartite motif containing 28, humanhuman

TSL 2

Gene TRIM28, Length 609 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-210ENST00000597618 NOX1Q9Y5S8 564 aa8.69□□□□□ -1.02
TRIM28-210ENST00000597618 NBEAL2Q6ZNJ1 2754 aa8.68□□□□□ -1.02
TRIM28-210ENST00000597618 A0A1W2PPW3 197 aa8.68□□□□□ -1.02
TRIM28-210ENST00000597618 ZNF503-AS2A6NEH8 195 aa8.68□□□□□ -1.02
TRIM28-210ENST00000597618 CFAP73A6NFT4 308 aa8.68□□□□□ -1.02
TRIM28-210ENST00000597618 TMEM229AB2RXF0 380 aa8.68□□□□□ -1.02
TRIM28-210ENST00000597618 PLIN3O60664 434 aa8.68□□□□□ -1.02
TRIM28-210ENST00000597618 PEX11AO75192 247 aa8.68□□□□□ -1.02
TRIM28-210ENST00000597618 NCR1O76036 304 aa8.68□□□□□ -1.02
TRIM28-210ENST00000597618 ZNF432O94892 652 aa8.68□□□□□ -1.02
TRIM28-210ENST00000597618 FSHBP01225 129 aa8.68□□□□□ -1.02
TRIM28-210ENST00000597618 CHRM4P08173 479 aa8.68□□□□□ -1.02
TRIM28-210ENST00000597618 OR12D1P0DN82 309 aa8.68□□□□□ -1.02
TRIM28-210ENST00000597618 CPA3P15088 417 aa8.68□□□□□ -1.02
TRIM28-210ENST00000597618 PRTN3P24158 256 aa8.68□□□□□ -1.02
TRIM28-210ENST00000597618 CASQ1P31415 396 aa8.68□□□□□ -1.02
TRIM28-210ENST00000597618 GLRXP35754 106 aa8.68□□□□□ -1.02
TRIM28-210ENST00000597618 SEC24CP53992 1094 aa8.68□□□□□ -1.02
TRIM28-210ENST00000597618 CKAP4Q07065 602 aaKnown RBP8.68□□□□□ -1.02
TRIM28-210ENST00000597618 FUT5Q11128 374 aa8.68□□□□□ -1.02
TRIM28-210ENST00000597618 GNA13Q14344 377 aa8.68□□□□□ -1.02
TRIM28-210ENST00000597618 GSTA3Q16772 222 aa8.68□□□□□ -1.02
TRIM28-210ENST00000597618 MSMPQ1L6U9 139 aa8.68□□□□□ -1.02
TRIM28-210ENST00000597618 MMEL1Q495T6 779 aa8.68□□□□□ -1.02
TRIM28-210ENST00000597618 GKAP1Q5VSY0 366 aaPredicted RBP8.68□□□□□ -1.02
TRIM28-210ENST00000597618 HMGN2P46Q86SG4 172 aa8.68□□□□□ -1.02
TRIM28-210ENST00000597618 RIMKLAQ8IXN7 391 aa8.68□□□□□ -1.02
TRIM28-210ENST00000597618 CLEC4FQ8N1N0 589 aa8.68□□□□□ -1.02
TRIM28-210ENST00000597618 GPR137CQ8N3F9 429 aa8.68□□□□□ -1.02
TRIM28-210ENST00000597618 CCDC63Q8NA47 563 aa8.68□□□□□ -1.02
TRIM28-210ENST00000597618 RNF217Q8TC41 542 aa8.68□□□□□ -1.02
TRIM28-210ENST00000597618 XAGE5Q8WWM1 108 aa8.68□□□□□ -1.02
TRIM28-210ENST00000597618 IFT81Q8WYA0 676 aa8.68□□□□□ -1.02
TRIM28-210ENST00000597618 C22orf15Q8WYQ4 148 aa8.68□□□□□ -1.02
TRIM28-210ENST00000597618 ZG16BQ96DA0 208 aa8.68□□□□□ -1.02
TRIM28-210ENST00000597618 C1orf50Q9BV19 199 aa8.68□□□□□ -1.02
TRIM28-210ENST00000597618 SLITRK2Q9H156 845 aa8.68□□□□□ -1.02
TRIM28-210ENST00000597618 C7orf69Q9H7B7 122 aa8.68□□□□□ -1.02
TRIM28-210ENST00000597618 GIMAP2Q9UG22 337 aa8.68□□□□□ -1.02
TRIM28-210ENST00000597618 DNAJC9-AS1A6NH13 148 aa8.67□□□□□ -1.02
TRIM28-210ENST00000597618 AGAP5A6NIR3 686 aa8.67□□□□□ -1.02
TRIM28-210ENST00000597618 A8MVM7 634 aa8.67□□□□□ -1.02
TRIM28-210ENST00000597618 TMEM233B4DJY2 109 aa8.67□□□□□ -1.02
TRIM28-210ENST00000597618 RNASET2O00584 256 aaKnown RBP8.67□□□□□ -1.02
TRIM28-210ENST00000597618 FRS3O43559 492 aa8.67□□□□□ -1.02
TRIM28-210ENST00000597618 SLC43A1O75387 559 aa8.67□□□□□ -1.02
TRIM28-210ENST00000597618 DEAF1O75398 565 aaPredicted RBP8.67□□□□□ -1.02
TRIM28-210ENST00000597618 ZFP36P26651 326 aaKnown RBP8.67□□□□□ -1.02
TRIM28-210ENST00000597618 ECHS1P30084 290 aa8.67□□□□□ -1.02
TRIM28-210ENST00000597618 CCT5P48643 541 aa8.67□□□□□ -1.02
TRIM28-210ENST00000597618 GALK2Q01415 458 aa8.67□□□□□ -1.02
TRIM28-210ENST00000597618 EPS8Q12929 822 aa8.67□□□□□ -1.02
TRIM28-210ENST00000597618 MAD2L1BPQ15013 274 aaPredicted RBP8.67□□□□□ -1.02
TRIM28-210ENST00000597618 GSG1Q2KHT4 349 aa8.67□□□□□ -1.02
TRIM28-210ENST00000597618 PGS1Q32NB8 556 aa8.67□□□□□ -1.02
TRIM28-210ENST00000597618 TRMT5Q32P41 509 aaKnown RBP8.67□□□□□ -1.02
TRIM28-210ENST00000597618 GPAT3Q53EU6 434 aa8.67□□□□□ -1.02
TRIM28-210ENST00000597618 XKR7Q5GH72 579 aa8.67□□□□□ -1.02
TRIM28-210ENST00000597618 IL23RQ5VWK5 629 aa8.67□□□□□ -1.02
TRIM28-210ENST00000597618 TNFAIP8L2Q6P589 184 aaPredicted RBP8.67□□□□□ -1.02
TRIM28-210ENST00000597618 DOK3Q7L591 496 aa8.67□□□□□ -1.02
TRIM28-210ENST00000597618 LSRQ86X29 649 aaPredicted RBP8.67□□□□□ -1.02
TRIM28-210ENST00000597618 TREML1Q86YW5 311 aa8.67□□□□□ -1.02
TRIM28-210ENST00000597618 ZNF440Q8IYI8 595 aa8.67□□□□□ -1.02
TRIM28-210ENST00000597618 CLECL1Q8IZS7 167 aa8.67□□□□□ -1.02
TRIM28-210ENST00000597618 SIGLECL1Q8N7X8 197 aa8.67□□□□□ -1.02
TRIM28-210ENST00000597618 FNDC5Q8NAU1 212 aa8.67□□□□□ -1.02
TRIM28-210ENST00000597618 SYT14Q8NB59 555 aa8.67□□□□□ -1.02
TRIM28-210ENST00000597618 OR4A15Q8NGL6 344 aa8.67□□□□□ -1.02
TRIM28-210ENST00000597618 MGARPQ8TDB4 240 aa8.67□□□□□ -1.02
TRIM28-210ENST00000597618 MZB1Q8WU39 189 aa8.67□□□□□ -1.02
TRIM28-210ENST00000597618 RAB8BQ92930 207 aa8.67□□□□□ -1.02
TRIM28-210ENST00000597618 DVL3Q92997 716 aaPredicted RBP8.67□□□□□ -1.02
TRIM28-210ENST00000597618 GPR35Q9HC97 309 aa8.67□□□□□ -1.02
TRIM28-210ENST00000597618 PRDM4Q9UKN5 801 aa8.67□□□□□ -1.02
TRIM28-210ENST00000597618 WNK2Q9Y3S1 2297 aa8.67□□□□□ -1.02
TRIM28-210ENST00000597618 NUP214P35658 2090 aaPredicted RBP8.66□□□□□ -1.02
TRIM28-210ENST00000597618 A0A096LPI6 279 aa8.66□□□□□ -1.02
TRIM28-210ENST00000597618 ZNF99A8MXY4 864 aaPredicted RBP8.66□□□□□ -1.02
TRIM28-210ENST00000597618 IGHV2-5P01817 119 aa8.66□□□□□ -1.02
TRIM28-210ENST00000597618 FGF4P08620 206 aa8.66□□□□□ -1.02
TRIM28-210ENST00000597618 NUDT17P0C025 328 aa8.66□□□□□ -1.02
TRIM28-210ENST00000597618 NAT2P11245 290 aa8.66□□□□□ -1.02
TRIM28-210ENST00000597618 ZNF35P13682 527 aa8.66□□□□□ -1.02
TRIM28-210ENST00000597618 ZNF43P17038 809 aa8.66□□□□□ -1.02
TRIM28-210ENST00000597618 CRHR1P34998 444 aa8.66□□□□□ -1.02
TRIM28-210ENST00000597618 CLDN17P56750 224 aa8.66□□□□□ -1.02
TRIM28-210ENST00000597618 MVKQ03426 396 aa8.66□□□□□ -1.02
TRIM28-210ENST00000597618 NKPD1Q17RQ9 610 aa8.66□□□□□ -1.02
TRIM28-210ENST00000597618 CEACAM16Q2WEN9 425 aa8.66□□□□□ -1.02
TRIM28-210ENST00000597618 PCGF3Q3KNV8 242 aa8.66□□□□□ -1.02
TRIM28-210ENST00000597618 UGT3A2Q3SY77 523 aa8.66□□□□□ -1.02
TRIM28-210ENST00000597618 GLIPR1L2Q4G1C9 344 aa8.66□□□□□ -1.02
TRIM28-210ENST00000597618 C6orf136Q5SQH8 315 aa8.66□□□□□ -1.02
TRIM28-210ENST00000597618 AVPI1Q5T686 147 aa8.66□□□□□ -1.02
TRIM28-210ENST00000597618 C1orf140Q5VVS0 124 aa8.66□□□□□ -1.02
TRIM28-210ENST00000597618 TRMT10CQ7L0Y3 403 aaKnown RBP8.66□□□□□ -1.02
TRIM28-210ENST00000597618 RETREG3Q86VR2 466 aa8.66□□□□□ -1.02
TRIM28-210ENST00000597618 LRP11Q86VZ4 500 aa8.66□□□□□ -1.02
TRIM28-210ENST00000597618 C10orf107Q8IVU9 208 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms