RNA–Protein interactions for RNA: ENST00000596379.1

LINC02560-201, Transcript of long intergenic non-protein coding RNA 2560, humanhuman

BASIC

Gene LINC02560, Length 459 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02560-201ENST00000596379 ZNF540Q8NDQ6 660 aa13.82□□□□□ -0.2
LINC02560-201ENST00000596379 OR4F15Q8NGB8 312 aa13.82□□□□□ -0.2
LINC02560-201ENST00000596379 MFSD8Q8NHS3 518 aa13.82□□□□□ -0.2
LINC02560-201ENST00000596379 STK35Q8TDR2 534 aa13.82□□□□□ -0.2
LINC02560-201ENST00000596379 SOX7Q9BT81 388 aa13.82□□□□□ -0.2
LINC02560-201ENST00000596379 SPATA9Q9BWV2 254 aa13.82□□□□□ -0.2
LINC02560-201ENST00000596379 RAB1BQ9H0U4 201 aa13.82□□□□□ -0.2
LINC02560-201ENST00000596379 TPT1P8Q9HAU6 139 aa13.82□□□□□ -0.2
LINC02560-201ENST00000596379 A0A0G2JPF8 293 aa13.81□□□□□ -0.2
LINC02560-201ENST00000596379 TRPC5OSA6NMA1 111 aa13.81□□□□□ -0.2
LINC02560-201ENST00000596379 HNRNPCL2B2RXH8 293 aa13.81□□□□□ -0.2
LINC02560-201ENST00000596379 HNRNPCL3B7ZW38 293 aa13.81□□□□□ -0.2
LINC02560-201ENST00000596379 HDAC3O15379 428 aa13.81□□□□□ -0.2
LINC02560-201ENST00000596379 HNRNPCL1O60812 293 aaKnown RBP13.81□□□□□ -0.2
LINC02560-201ENST00000596379 SLC22A3O75751 556 aa13.81□□□□□ -0.2
LINC02560-201ENST00000596379 STAMBPO95630 424 aa13.81□□□□□ -0.2
LINC02560-201ENST00000596379 IGKV3-15P01624 115 aa13.81□□□□□ -0.2
LINC02560-201ENST00000596379 CELA3BP08861 270 aa13.81□□□□□ -0.2
LINC02560-201ENST00000596379 HNRNPCL4P0DMR1 293 aa13.81□□□□□ -0.2
LINC02560-201ENST00000596379 KITP10721 976 aa13.81□□□□□ -0.2
LINC02560-201ENST00000596379 PNMTP11086 282 aa13.81□□□□□ -0.2
LINC02560-201ENST00000596379 ZNF43P17038 809 aa13.81□□□□□ -0.2
LINC02560-201ENST00000596379 HNF1AP20823 631 aa13.81□□□□□ -0.2
LINC02560-201ENST00000596379 THBS4P35443 961 aa13.81□□□□□ -0.2
LINC02560-201ENST00000596379 RPS5P46782 204 aaKnown RBP13.81□□□□□ -0.2
LINC02560-201ENST00000596379 PPOXP50336 477 aa13.81□□□□□ -0.2
LINC02560-201ENST00000596379 ARF1P84077 181 aaKnown RBP13.81□□□□□ -0.2
LINC02560-201ENST00000596379 HOXC5Q00444 222 aa13.81□□□□□ -0.2
LINC02560-201ENST00000596379 HGFACQ04756 655 aa13.81□□□□□ -0.2
LINC02560-201ENST00000596379 EGR4Q05215 589 aa13.81□□□□□ -0.2
LINC02560-201ENST00000596379 GTDC1Q4AE62 458 aa13.81□□□□□ -0.2
LINC02560-201ENST00000596379 PDCD4Q53EL6 469 aaKnown RBP13.81□□□□□ -0.2
LINC02560-201ENST00000596379 TNFAIP8L3Q5GJ75 292 aa13.81□□□□□ -0.2
LINC02560-201ENST00000596379 NXNQ6DKJ4 435 aa13.81□□□□□ -0.2
LINC02560-201ENST00000596379 MYPOPQ86VE0 399 aaPredicted RBP13.81□□□□□ -0.2
LINC02560-201ENST00000596379 FAM169BQ8N8A8 192 aa13.81□□□□□ -0.2
LINC02560-201ENST00000596379 TMEM19Q96HH6 336 aa13.81□□□□□ -0.2
LINC02560-201ENST00000596379 PTDSS2Q9BVG9 487 aa13.81□□□□□ -0.2
LINC02560-201ENST00000596379 ARMC7Q9H6L4 198 aa13.81□□□□□ -0.2
LINC02560-201ENST00000596379 SEC14L4Q9UDX3 406 aa13.81□□□□□ -0.2
LINC02560-201ENST00000596379 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.81□□□□□ -0.2
LINC02560-201ENST00000596379 V9GYY5 206 aaPredicted RBP13.81□□□□□ -0.2
LINC02560-201ENST00000596379 LRP5LA4QPB2 252 aa13.8□□□□□ -0.2
LINC02560-201ENST00000596379 VSTM5A8MXK1 200 aa13.8□□□□□ -0.2
LINC02560-201ENST00000596379 RPL36A-HNRNPH2H7BZ11 118 aa13.8□□□□□ -0.2
LINC02560-201ENST00000596379 hCG_2039718K7EN88 272 aa13.8□□□□□ -0.2
LINC02560-201ENST00000596379 ZNF432O94892 652 aa13.8□□□□□ -0.2
LINC02560-201ENST00000596379 ZCCHC18P0CG32 403 aa13.8□□□□□ -0.2
LINC02560-201ENST00000596379 CBR1P16152 277 aa13.8□□□□□ -0.2
LINC02560-201ENST00000596379 SH3BGRP55822 239 aaPredicted RBP13.8□□□□□ -0.2
LINC02560-201ENST00000596379 CR1LQ2VPA4 569 aa13.8□□□□□ -0.2
LINC02560-201ENST00000596379 ZNF311Q5JNZ3 666 aa13.8□□□□□ -0.2
LINC02560-201ENST00000596379 CEP85LQ5SZL2 805 aa13.8□□□□□ -0.2
LINC02560-201ENST00000596379 HHATQ5VTY9 493 aa13.8□□□□□ -0.2
LINC02560-201ENST00000596379 ZCCHC24Q8N2G6 241 aaKnown RBP13.8□□□□□ -0.2
LINC02560-201ENST00000596379 ANKRD42Q8N9B4 389 aa13.8□□□□□ -0.2
LINC02560-201ENST00000596379 ANKK1Q8NFD2 765 aa13.8□□□□□ -0.2
LINC02560-201ENST00000596379 NUP37Q8NFH4 326 aa13.8□□□□□ -0.2
LINC02560-201ENST00000596379 KTI12Q96EK9 354 aaPredicted RBP13.8□□□□□ -0.2
LINC02560-201ENST00000596379 OXGR1Q96P68 337 aa13.8□□□□□ -0.2
LINC02560-201ENST00000596379 DOK1Q99704 481 aa13.8□□□□□ -0.2
LINC02560-201ENST00000596379 CACYBPQ9HB71 228 aaKnown RBP13.8□□□□□ -0.2
LINC02560-201ENST00000596379 GPR35Q9HC97 309 aa13.8□□□□□ -0.2
LINC02560-201ENST00000596379 THAP1Q9NVV9 213 aa13.8□□□□□ -0.2
LINC02560-201ENST00000596379 IFT52Q9Y366 437 aa13.8□□□□□ -0.2
LINC02560-201ENST00000596379 NBEAL1Q6ZS30 2694 aa13.79□□□□□ -0.2
LINC02560-201ENST00000596379 TMEM129A0AVI4 362 aa13.79□□□□□ -0.2
LINC02560-201ENST00000596379 SH3PXD2BA1X283 911 aa13.79□□□□□ -0.2
LINC02560-201ENST00000596379 TMEM247A6NEH6 219 aa13.79□□□□□ -0.2
LINC02560-201ENST00000596379 SLC43A1O75387 559 aa13.79□□□□□ -0.2
LINC02560-201ENST00000596379 NUDT7P0C024 238 aa13.79□□□□□ -0.2
LINC02560-201ENST00000596379 IDO1P14902 403 aa13.79□□□□□ -0.2
LINC02560-201ENST00000596379 DAOP14920 347 aa13.79□□□□□ -0.2
LINC02560-201ENST00000596379 NPR2P20594 1047 aa13.79□□□□□ -0.2
LINC02560-201ENST00000596379 GIFP27352 417 aa13.79□□□□□ -0.2
LINC02560-201ENST00000596379 GTF2E2P29084 291 aaKnown RBP13.79□□□□□ -0.2
LINC02560-201ENST00000596379 WDR4P57081 412 aaKnown RBP13.79□□□□□ -0.2
LINC02560-201ENST00000596379 SQLEQ14534 574 aa13.79□□□□□ -0.2
LINC02560-201ENST00000596379 SPATA21Q7Z572 469 aa13.79□□□□□ -0.2
LINC02560-201ENST00000596379 GPR137CQ8N3F9 429 aa13.79□□□□□ -0.2
LINC02560-201ENST00000596379 SVOPLQ8N434 492 aa13.79□□□□□ -0.2
LINC02560-201ENST00000596379 NEU4Q8WWR8 484 aaPredicted RBP13.79□□□□□ -0.2
LINC02560-201ENST00000596379 VPS33AQ96AX1 596 aa13.79□□□□□ -0.2
LINC02560-201ENST00000596379 ZNF837Q96EG3 531 aaPredicted RBP13.79□□□□□ -0.2
LINC02560-201ENST00000596379 ITCHQ96J02 903 aa13.79□□□□□ -0.2
LINC02560-201ENST00000596379 ZNF442Q9H7R0 627 aa13.79□□□□□ -0.2
LINC02560-201ENST00000596379 RMND5AQ9H871 391 aa13.79□□□□□ -0.2
LINC02560-201ENST00000596379 MOV10Q9HCE1 1003 aaKnown RBP13.79□□□□□ -0.2
LINC02560-201ENST00000596379 THUMPD1Q9NXG2 353 aaKnown RBP13.79□□□□□ -0.2
LINC02560-201ENST00000596379 B3GAT1Q9P2W7 334 aa13.79□□□□□ -0.2
LINC02560-201ENST00000596379 FBXO9Q9UK97 447 aaPredicted RBP13.79□□□□□ -0.2
LINC02560-201ENST00000596379 RCE1Q9Y256 329 aa13.79□□□□□ -0.2
LINC02560-201ENST00000596379 IGHV2OR16-5A0A0B4J2B6 119 aa13.78□□□□□ -0.2
LINC02560-201ENST00000596379 ZNF503-AS2A6NEH8 195 aa13.78□□□□□ -0.2
LINC02560-201ENST00000596379 LILRA1O75019 489 aa13.78□□□□□ -0.2
LINC02560-201ENST00000596379 IL2RGP31785 369 aa13.78□□□□□ -0.2
LINC02560-201ENST00000596379 ARR3P36575 388 aa13.78□□□□□ -0.2
LINC02560-201ENST00000596379 NPRL3Q12980 569 aa13.78□□□□□ -0.2
LINC02560-201ENST00000596379 C1DQ13901 141 aaKnown RBP13.78□□□□□ -0.2
LINC02560-201ENST00000596379 CEACAM16Q2WEN9 425 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms