RNA–Protein interactions for RNA: ENST00000596014.5

PNKP-207, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PNKP, Length 1,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-207ENST00000596014 A0A1W2PRQ8 180 aa17.18■□□□□ 0.34
PNKP-207ENST00000596014 M0R082 166 aa17.18■□□□□ 0.34
PNKP-207ENST00000596014 CH25HO95992 272 aa17.18■□□□□ 0.34
PNKP-207ENST00000596014 MT-ATP6P00846 226 aa17.18■□□□□ 0.34
PNKP-207ENST00000596014 MAGEA2P43356 314 aa17.18■□□□□ 0.34
PNKP-207ENST00000596014 LSM11P83369 360 aaKnown RBP eCLIP17.18■□□□□ 0.341e-11■■■■■ 50.1
PNKP-207ENST00000596014 DGCR6Q14129 220 aa17.18■□□□□ 0.34
PNKP-207ENST00000596014 ICA1LQ8NDH6 482 aa17.18■□□□□ 0.34
PNKP-207ENST00000596014 OR6K3Q8NGY3 331 aa17.18■□□□□ 0.34
PNKP-207ENST00000596014 ZNF417Q8TAU3 575 aa17.18■□□□□ 0.34
PNKP-207ENST00000596014 DHRS1Q96LJ7 313 aa17.18■□□□□ 0.34
PNKP-207ENST00000596014 ZNF347Q96SE7 839 aa17.18■□□□□ 0.34
PNKP-207ENST00000596014 ZNF587Q96SQ5 575 aaPredicted RBP17.18■□□□□ 0.34
PNKP-207ENST00000596014 PIGMQ9H3S5 423 aa17.18■□□□□ 0.34
PNKP-207ENST00000596014 C20orf141Q9NUB4 165 aa17.18■□□□□ 0.34
PNKP-207ENST00000596014 JKAMPQ9P055 326 aa17.18■□□□□ 0.34
PNKP-207ENST00000596014 B3GALT5Q9Y2C3 310 aa17.18■□□□□ 0.34
PNKP-207ENST00000596014 CORINQ9Y5Q5 1042 aa17.18■□□□□ 0.34
PNKP-207ENST00000596014 A1L4Q6 167 aa17.17■□□□□ 0.34
PNKP-207ENST00000596014 ENO4A6NNW6 628 aa17.17■□□□□ 0.34
PNKP-207ENST00000596014 ZNF724A8MTY0 619 aa17.17■□□□□ 0.34
PNKP-207ENST00000596014 VAMP5O95183 116 aa17.17■□□□□ 0.34
PNKP-207ENST00000596014 CLDN1O95832 211 aa17.17■□□□□ 0.34
PNKP-207ENST00000596014 CGAP01215 116 aa17.17■□□□□ 0.34
PNKP-207ENST00000596014 IGF2P01344 180 aa17.17■□□□□ 0.34
PNKP-207ENST00000596014 UMPSP11172 480 aa17.17■□□□□ 0.34
PNKP-207ENST00000596014 SLC17A1Q14916 467 aa17.17■□□□□ 0.34
PNKP-207ENST00000596014 H1FNTQ75WM6 255 aaPredicted RBP17.17■□□□□ 0.34
PNKP-207ENST00000596014 ADGRG5Q8IZF4 528 aa17.17■□□□□ 0.34
PNKP-207ENST00000596014 SLC7A13Q8TCU3 470 aa17.17■□□□□ 0.34
PNKP-207ENST00000596014 CANT1Q8WVQ1 401 aa17.17■□□□□ 0.34
PNKP-207ENST00000596014 ACOT11Q8WXI4 607 aaPredicted RBP17.17■□□□□ 0.34
PNKP-207ENST00000596014 LRTOMTQ8WZ04 291 aa17.17■□□□□ 0.34
PNKP-207ENST00000596014 CHST11Q9NPF2 352 aa17.17■□□□□ 0.34
PNKP-207ENST00000596014 PLSCR4Q9NRQ2 329 aa17.17■□□□□ 0.34
PNKP-207ENST00000596014 CCM2LQ9NUG4 571 aaPredicted RBP17.17■□□□□ 0.34
PNKP-207ENST00000596014 MRPL39Q9NYK5 338 aaKnown RBP17.17■□□□□ 0.34
PNKP-207ENST00000596014 TESMINQ9Y4I5 508 aa17.17■□□□□ 0.34
PNKP-207ENST00000596014 A0A087WUU8 490 aa17.16■□□□□ 0.34
PNKP-207ENST00000596014 EEF1E1-BLOC1S5C9J1V9 151 aa17.16■□□□□ 0.34
PNKP-207ENST00000596014 EEF1E1O43324 174 aaKnown RBP17.16■□□□□ 0.34
PNKP-207ENST00000596014 SMNDC1O75940 238 aaKnown RBP eCLIP17.16■□□□□ 0.34
PNKP-207ENST00000596014 CD8BP10966 210 aa17.16■□□□□ 0.34
PNKP-207ENST00000596014 BLMHQ13867 455 aa17.16■□□□□ 0.34
PNKP-207ENST00000596014 HMBOX1Q6NT76 420 aa17.16■□□□□ 0.34
PNKP-207ENST00000596014 TBPL2Q6SJ96 375 aa17.16■□□□□ 0.34
PNKP-207ENST00000596014 MAMDC2Q7Z304 686 aaPredicted RBP17.16■□□□□ 0.34
PNKP-207ENST00000596014 NUFIP2Q7Z417 695 aaKnown RBP17.16■□□□□ 0.34
PNKP-207ENST00000596014 GPAT4Q86UL3 456 aa17.16■□□□□ 0.34
PNKP-207ENST00000596014 RNF113BQ8IZP6 322 aaKnown RBP17.16■□□□□ 0.34
PNKP-207ENST00000596014 KDM8Q8N371 416 aa17.16■□□□□ 0.34
PNKP-207ENST00000596014 LRRC17Q8N6Y2 441 aa17.16■□□□□ 0.34
PNKP-207ENST00000596014 SCAIQ8N9R8 606 aa17.16■□□□□ 0.34
PNKP-207ENST00000596014 OR52J3Q8NH60 311 aa17.16■□□□□ 0.34
PNKP-207ENST00000596014 SF3B5Q9BWJ5 86 aaKnown RBP17.16■□□□□ 0.34
PNKP-207ENST00000596014 ASPNQ9BXN1 380 aa17.16■□□□□ 0.34
PNKP-207ENST00000596014 VCXQ9H320 206 aa17.16■□□□□ 0.34
PNKP-207ENST00000596014 FKRPQ9H9S5 495 aa17.16■□□□□ 0.34
PNKP-207ENST00000596014 NANSQ9NR45 359 aa17.16■□□□□ 0.34
PNKP-207ENST00000596014 BATF3Q9NR55 127 aa17.16■□□□□ 0.34
PNKP-207ENST00000596014 EMC3Q9P0I2 261 aa17.16■□□□□ 0.34
PNKP-207ENST00000596014 PROCRQ9UNN8 238 aa17.16■□□□□ 0.34
PNKP-207ENST00000596014 AURKCQ9UQB9 309 aa17.16■□□□□ 0.34
PNKP-207ENST00000596014 RASD1Q9Y272 281 aa17.16■□□□□ 0.34
PNKP-207ENST00000596014 KLF2Q9Y5W3 355 aaPredicted RBP17.16■□□□□ 0.34
PNKP-207ENST00000596014 GPR171O14626 319 aa17.16■□□□□ 0.34
PNKP-207ENST00000596014 MSTNO14793 375 aa17.16■□□□□ 0.34
PNKP-207ENST00000596014 TIPRLO75663 272 aa17.16■□□□□ 0.34
PNKP-207ENST00000596014 RAP2AP10114 183 aa17.16■□□□□ 0.34
PNKP-207ENST00000596014 SMIM11AP58511 58 aa17.16■□□□□ 0.34
PNKP-207ENST00000596014 TFF3Q07654 80 aa17.16■□□□□ 0.34
PNKP-207ENST00000596014 FGD3Q5JSP0 725 aa17.16■□□□□ 0.34
PNKP-207ENST00000596014 PODNL1Q6PEZ8 512 aa17.16■□□□□ 0.34
PNKP-207ENST00000596014 ZNF730Q6ZMV8 503 aa17.16■□□□□ 0.34
PNKP-207ENST00000596014 GALNT5Q7Z7M9 940 aa17.16■□□□□ 0.34
PNKP-207ENST00000596014 LUZP2Q86TE4 346 aa17.16■□□□□ 0.34
PNKP-207ENST00000596014 NRMQ8IXM6 262 aa17.16■□□□□ 0.34
PNKP-207ENST00000596014 ADPRHL1Q8NDY3 354 aa17.16■□□□□ 0.34
PNKP-207ENST00000596014 OR9K2Q8NGE7 335 aa17.16■□□□□ 0.34
PNKP-207ENST00000596014 SGTBQ96EQ0 304 aa17.16■□□□□ 0.34
PNKP-207ENST00000596014 C12orf49Q9H741 205 aa17.16■□□□□ 0.34
PNKP-207ENST00000596014 ZNF229Q9UJW7 825 aa17.16■□□□□ 0.34
PNKP-207ENST00000596014 FLVCR1Q9Y5Y0 555 aa17.16■□□□□ 0.34
PNKP-207ENST00000596014 ALPK2Q86TB3 2170 aa17.16■□□□□ 0.34
PNKP-207ENST00000596014 TRBV4-1A0A0J9YWV2 114 aa17.15■□□□□ 0.34
PNKP-207ENST00000596014 HTR3EA5X5Y0 456 aa17.15■□□□□ 0.34
PNKP-207ENST00000596014 A8MXE2 369 aa17.15■□□□□ 0.34
PNKP-207ENST00000596014 MS4A18H0YCH9 400 aa17.15■□□□□ 0.34
PNKP-207ENST00000596014 PIP5K1CO60331 668 aa17.15■□□□□ 0.34
PNKP-207ENST00000596014 GADD45GO95257 159 aa17.15■□□□□ 0.34
PNKP-207ENST00000596014 ASAH2BP0C7U1 165 aa17.15■□□□□ 0.34
PNKP-207ENST00000596014 IFI30P13284 250 aa17.15■□□□□ 0.34
PNKP-207ENST00000596014 FUT1P19526 365 aa17.15■□□□□ 0.34
PNKP-207ENST00000596014 RRM2P31350 389 aa17.15■□□□□ 0.34
PNKP-207ENST00000596014 NTF4P34130 210 aa17.15■□□□□ 0.34
PNKP-207ENST00000596014 ASCL1P50553 236 aa17.15■□□□□ 0.34
PNKP-207ENST00000596014 SPIBQ01892 262 aa17.15■□□□□ 0.34
PNKP-207ENST00000596014 PMS2P3Q13401 168 aa17.15■□□□□ 0.34
PNKP-207ENST00000596014 MS4A18Q3C1V0 323 aa17.15■□□□□ 0.34
PNKP-207ENST00000596014 FBXL19-AS1Q494R0 122 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms