RNA–Protein interactions for RNA: ENST00000595242.3

SCAF1-202, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 463 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-202ENST00000595242 PROK2Q9HC23 129 aa11.51□□□□□ -0.57
SCAF1-202ENST00000595242 ZNF701Q9NV72 531 aaPredicted RBP11.51□□□□□ -0.57
SCAF1-202ENST00000595242 SNX5Q9Y5X3 404 aa11.51□□□□□ -0.57
SCAF1-202ENST00000595242 XPNPEP2O43895 674 aa11.5□□□□□ -0.57
SCAF1-202ENST00000595242 OR10H2O60403 315 aa11.5□□□□□ -0.57
SCAF1-202ENST00000595242 OR10H3O60404 316 aa11.5□□□□□ -0.57
SCAF1-202ENST00000595242 TPST2O60704 377 aa11.5□□□□□ -0.57
SCAF1-202ENST00000595242 FMO6PO60774 539 aa11.5□□□□□ -0.57
SCAF1-202ENST00000595242 TRAPPC6AO75865 159 aa11.5□□□□□ -0.57
SCAF1-202ENST00000595242 OR5F1O95221 314 aa11.5□□□□□ -0.57
SCAF1-202ENST00000595242 IFNA16P05015 189 aa11.5□□□□□ -0.57
SCAF1-202ENST00000595242 GSTM3P21266 225 aa11.5□□□□□ -0.57
SCAF1-202ENST00000595242 CHMP24386 653 aa11.5□□□□□ -0.57
SCAF1-202ENST00000595242 FMO3P31513 532 aa11.5□□□□□ -0.57
SCAF1-202ENST00000595242 FUT7Q11130 342 aa11.5□□□□□ -0.57
SCAF1-202ENST00000595242 ST3GAL3Q11203 375 aa11.5□□□□□ -0.57
SCAF1-202ENST00000595242 LSAMPQ13449 338 aa11.5□□□□□ -0.57
SCAF1-202ENST00000595242 SERTAD2Q14140 314 aa11.5□□□□□ -0.57
SCAF1-202ENST00000595242 EXOSC7Q15024 291 aaKnown RBP11.5□□□□□ -0.57
SCAF1-202ENST00000595242 PTGES3Q15185 160 aaKnown RBP11.5□□□□□ -0.57
SCAF1-202ENST00000595242 CLEC12BQ2HXU8 276 aa11.5□□□□□ -0.57
SCAF1-202ENST00000595242 ZNF791Q3KP31 576 aaPredicted RBP11.5□□□□□ -0.57
SCAF1-202ENST00000595242 ENTPD8Q5MY95 495 aa11.5□□□□□ -0.57
SCAF1-202ENST00000595242 TMEM201Q5SNT2 666 aa11.5□□□□□ -0.57
SCAF1-202ENST00000595242 C12orf73Q69YU5 71 aa11.5□□□□□ -0.57
SCAF1-202ENST00000595242 VASNQ6EMK4 673 aa11.5□□□□□ -0.57
SCAF1-202ENST00000595242 PRSS48Q7RTY5 328 aa11.5□□□□□ -0.57
SCAF1-202ENST00000595242 SVOPQ8N4V2 548 aa11.5□□□□□ -0.57
SCAF1-202ENST00000595242 OR4K5Q8NGD3 323 aa11.5□□□□□ -0.57
SCAF1-202ENST00000595242 OR52R1Q8NGF1 315 aa11.5□□□□□ -0.57
SCAF1-202ENST00000595242 FAM81AQ8TBF8 368 aa11.5□□□□□ -0.57
SCAF1-202ENST00000595242 PTPMT1Q8WUK0 201 aaPredicted RBP11.5□□□□□ -0.57
SCAF1-202ENST00000595242 OIT3Q8WWZ8 545 aa11.5□□□□□ -0.57
SCAF1-202ENST00000595242 SGCDQ92629 289 aa11.5□□□□□ -0.57
SCAF1-202ENST00000595242 SLC38A4Q969I6 547 aa11.5□□□□□ -0.57
SCAF1-202ENST00000595242 SLC35B4Q969S0 331 aa11.5□□□□□ -0.57
SCAF1-202ENST00000595242 GTPBP3Q969Y2 492 aaKnown RBP11.5□□□□□ -0.57
SCAF1-202ENST00000595242 ISOC1Q96CN7 298 aa11.5□□□□□ -0.57
SCAF1-202ENST00000595242 ZG16BQ96DA0 208 aa11.5□□□□□ -0.57
SCAF1-202ENST00000595242 VSTM2LQ96N03 204 aa11.5□□□□□ -0.57
SCAF1-202ENST00000595242 SFXN3Q9BWM7 321 aa11.5□□□□□ -0.57
SCAF1-202ENST00000595242 REG4Q9BYZ8 158 aa11.5□□□□□ -0.57
SCAF1-202ENST00000595242 OR8D2Q9GZM6 311 aa11.5□□□□□ -0.57
SCAF1-202ENST00000595242 CACYBPQ9HB71 228 aaKnown RBP11.5□□□□□ -0.57
SCAF1-202ENST00000595242 FOLH1BQ9HBA9 442 aa11.5□□□□□ -0.57
SCAF1-202ENST00000595242 SLC13A4Q9UKG4 626 aa11.5□□□□□ -0.57
SCAF1-202ENST00000595242 MKLN1Q9UL63 735 aa11.5□□□□□ -0.57
SCAF1-202ENST00000595242 ZNF232Q9UNY5 417 aa11.5□□□□□ -0.57
SCAF1-202ENST00000595242 GPR55Q9Y2T6 319 aaPredicted RBP11.5□□□□□ -0.57
SCAF1-202ENST00000595242 SLC6A5Q9Y345 797 aa11.5□□□□□ -0.57
SCAF1-202ENST00000595242 SVEP1Q4LDE5 3571 aa11.5□□□□□ -0.57
SCAF1-202ENST00000595242 PRR14LQ5THK1 2151 aa11.5□□□□□ -0.57
SCAF1-202ENST00000595242 A8MV72 311 aaPredicted RBP11.49□□□□□ -0.57
SCAF1-202ENST00000595242 A8MXE2 369 aa11.49□□□□□ -0.57
SCAF1-202ENST00000595242 AP3D1O14617 1153 aa11.49□□□□□ -0.57
SCAF1-202ENST00000595242 FAM20BO75063 409 aa11.49□□□□□ -0.57
SCAF1-202ENST00000595242 NME6O75414 186 aaPredicted RBP11.49□□□□□ -0.57
SCAF1-202ENST00000595242 CRYGSP22914 178 aa11.49□□□□□ -0.57
SCAF1-202ENST00000595242 IFNA8P32881 189 aa11.49□□□□□ -0.57
SCAF1-202ENST00000595242 EMDP50402 254 aa11.49□□□□□ -0.57
SCAF1-202ENST00000595242 TMBIM6P55061 237 aa11.49□□□□□ -0.57
SCAF1-202ENST00000595242 RGS8P57771 180 aaPredicted RBP11.49□□□□□ -0.57
SCAF1-202ENST00000595242 CDC42P60953 191 aa11.49□□□□□ -0.57
SCAF1-202ENST00000595242 PSG6Q00889 435 aa11.49□□□□□ -0.57
SCAF1-202ENST00000595242 STX4Q12846 297 aa11.49□□□□□ -0.57
SCAF1-202ENST00000595242 ZNF155Q12901 538 aaPredicted RBP11.49□□□□□ -0.57
SCAF1-202ENST00000595242 NEDD8Q15843 81 aa11.49□□□□□ -0.57
SCAF1-202ENST00000595242 DECR1Q16698 335 aa11.49□□□□□ -0.57
SCAF1-202ENST00000595242 ZSWIM7Q19AV6 140 aa11.49□□□□□ -0.57
SCAF1-202ENST00000595242 CLVS1Q8IUQ0 354 aaPredicted RBP11.49□□□□□ -0.57
SCAF1-202ENST00000595242 CCDC103Q8IW40 242 aa11.49□□□□□ -0.57
SCAF1-202ENST00000595242 CLIP4Q8N3C7 705 aa11.49□□□□□ -0.57
SCAF1-202ENST00000595242 OR14A16Q8NHC5 309 aa11.49□□□□□ -0.57
SCAF1-202ENST00000595242 NMD3Q96D46 503 aaKnown RBP11.49□□□□□ -0.57
SCAF1-202ENST00000595242 WDYHV1Q96HA8 205 aa11.49□□□□□ -0.57
SCAF1-202ENST00000595242 DGAT2Q96PD7 388 aa11.49□□□□□ -0.57
SCAF1-202ENST00000595242 BCL7BQ9BQE9 202 aa11.49□□□□□ -0.57
SCAF1-202ENST00000595242 ALOXE3Q9BYJ1 711 aa11.49□□□□□ -0.57
SCAF1-202ENST00000595242 PIGMQ9H3S5 423 aa11.49□□□□□ -0.57
SCAF1-202ENST00000595242 SLC25A19Q9HC21 320 aa11.49□□□□□ -0.57
SCAF1-202ENST00000595242 CNIH4Q9P003 139 aa11.49□□□□□ -0.57
SCAF1-202ENST00000595242 PSORS1C1Q9UIG5 152 aa11.49□□□□□ -0.57
SCAF1-202ENST00000595242 KCNE5Q9UJ90 142 aa11.49□□□□□ -0.57
SCAF1-202ENST00000595242 FREM1Q5H8C1 2179 aa11.48□□□□□ -0.57
SCAF1-202ENST00000595242 TGP01266 2768 aa11.48□□□□□ -0.57
SCAF1-202ENST00000595242 A0A087WUU8 490 aa11.48□□□□□ -0.57
SCAF1-202ENST00000595242 CENPVL1A0A0U1RR11 272 aa11.48□□□□□ -0.57
SCAF1-202ENST00000595242 CDHR4A6H8M9 788 aa11.48□□□□□ -0.57
SCAF1-202ENST00000595242 SYNDIG1LA6NDD5 238 aa11.48□□□□□ -0.57
SCAF1-202ENST00000595242 CCDC160A6NGH7 325 aa11.48□□□□□ -0.57
SCAF1-202ENST00000595242 SNPHO15079 494 aa11.48□□□□□ -0.57
SCAF1-202ENST00000595242 RGS10O43665 173 aa11.48□□□□□ -0.57
SCAF1-202ENST00000595242 CYP7B1O75881 506 aa11.48□□□□□ -0.57
SCAF1-202ENST00000595242 KCNK2O95069 426 aa11.48□□□□□ -0.57
SCAF1-202ENST00000595242 RCBTB2O95199 551 aa11.48□□□□□ -0.57
SCAF1-202ENST00000595242 TNNI3P19429 210 aa11.48□□□□□ -0.57
SCAF1-202ENST00000595242 IFNGR2P38484 337 aa11.48□□□□□ -0.57
SCAF1-202ENST00000595242 GSSP48637 474 aa11.48□□□□□ -0.57
SCAF1-202ENST00000595242 MASP1P48740 699 aa11.48□□□□□ -0.57
SCAF1-202ENST00000595242 TAS2R41P59536 307 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 95.1 ms