RNA–Protein interactions for RNA: ENST00000591315.5

VMP1-211, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-211ENST00000591315 RASSF5Q8WWW0 418 aa10.17□□□□□ -0.78
VMP1-211ENST00000591315 FAM162AQ96A26 154 aa10.17□□□□□ -0.78
VMP1-211ENST00000591315 APH1AQ96BI3 265 aa10.17□□□□□ -0.78
VMP1-211ENST00000591315 NSL1Q96IY1 281 aa10.17□□□□□ -0.78
VMP1-211ENST00000591315 HSH2DQ96JZ2 352 aa10.17□□□□□ -0.78
VMP1-211ENST00000591315 TACO1Q9BSH4 297 aaKnown RBP10.17□□□□□ -0.78
VMP1-211ENST00000591315 TMEM43Q9BTV4 400 aa10.17□□□□□ -0.78
VMP1-211ENST00000591315 POLDIP3Q9BY77 421 aaKnown RBP10.17□□□□□ -0.78
VMP1-211ENST00000591315 CLEC4MQ9H2X3 399 aaPredicted RBP10.17□□□□□ -0.78
VMP1-211ENST00000591315 MEPEQ9NQ76 525 aaPredicted RBP10.17□□□□□ -0.78
VMP1-211ENST00000591315 SLC7A10Q9NS82 523 aa10.17□□□□□ -0.78
VMP1-211ENST00000591315 CD300AQ9UGN4 299 aa10.17□□□□□ -0.78
VMP1-211ENST00000591315 NDRG3Q9UGV2 375 aa10.17□□□□□ -0.78
VMP1-211ENST00000591315 A4GNTQ9UNA3 340 aa10.17□□□□□ -0.78
VMP1-211ENST00000591315 V9GYQ6 96 aa10.17□□□□□ -0.78
VMP1-211ENST00000591315 TEP1Q99973 2627 aaKnown RBP10.17□□□□□ -0.78
VMP1-211ENST00000591315 HEATR1Q9H583 2144 aaKnown RBP10.16□□□□□ -0.78
VMP1-211ENST00000591315 A0A1W2PR80 420 aa10.16□□□□□ -0.78
VMP1-211ENST00000591315 GPR171O14626 319 aa10.16□□□□□ -0.78
VMP1-211ENST00000591315 KLF4O43474 513 aa10.16□□□□□ -0.78
VMP1-211ENST00000591315 ITGA5P08648 1049 aa10.16□□□□□ -0.78
VMP1-211ENST00000591315 FUT1P19526 365 aa10.16□□□□□ -0.78
VMP1-211ENST00000591315 PCYT1AP49585 367 aa10.16□□□□□ -0.78
VMP1-211ENST00000591315 CLDN17P56750 224 aa10.16□□□□□ -0.78
VMP1-211ENST00000591315 MXRA7P84157 204 aa10.16□□□□□ -0.78
VMP1-211ENST00000591315 FAPQ12884 760 aa10.16□□□□□ -0.78
VMP1-211ENST00000591315 SWT1Q5T5J6 900 aaKnown RBP10.16□□□□□ -0.78
VMP1-211ENST00000591315 FBXW9Q5XUX1 488 aa10.16□□□□□ -0.78
VMP1-211ENST00000591315 GLYATQ6IB77 296 aa10.16□□□□□ -0.78
VMP1-211ENST00000591315 SEZ6L2Q6UXD5 910 aa10.16□□□□□ -0.78
VMP1-211ENST00000591315 NHLRC1Q6VVB1 395 aa10.16□□□□□ -0.78
VMP1-211ENST00000591315 Q6ZT83 130 aa10.16□□□□□ -0.78
VMP1-211ENST00000591315 H1FNTQ75WM6 255 aaPredicted RBP10.16□□□□□ -0.78
VMP1-211ENST00000591315 BHLHA15Q7RTS1 189 aaPredicted RBP10.16□□□□□ -0.78
VMP1-211ENST00000591315 ZNF433Q8N7K0 673 aaPredicted RBP10.16□□□□□ -0.78
VMP1-211ENST00000591315 BCAS4Q8TDM0 211 aa10.16□□□□□ -0.78
VMP1-211ENST00000591315 PIK3IP1Q96FE7 263 aa10.16□□□□□ -0.78
VMP1-211ENST00000591315 TXNDC15Q96J42 360 aa10.16□□□□□ -0.78
VMP1-211ENST00000591315 ZNF426Q9BUY5 554 aa10.16□□□□□ -0.78
VMP1-211ENST00000591315 SF3B5Q9BWJ5 86 aaKnown RBP10.16□□□□□ -0.78
VMP1-211ENST00000591315 EVA1AQ9H8M9 152 aa10.16□□□□□ -0.78
VMP1-211ENST00000591315 C20orf141Q9NUB4 165 aa10.16□□□□□ -0.78
VMP1-211ENST00000591315 RASD1Q9Y272 281 aa10.16□□□□□ -0.78
VMP1-211ENST00000591315 GPR52Q9Y2T5 361 aa10.16□□□□□ -0.78
VMP1-211ENST00000591315 ARID1AO14497 2285 aa10.16□□□□□ -0.78
VMP1-211ENST00000591315 USF3Q68DE3 2245 aa10.15□□□□□ -0.78
VMP1-211ENST00000591315 PDLIM1O00151 329 aa10.15□□□□□ -0.78
VMP1-211ENST00000591315 PLPP3O14495 311 aa10.15□□□□□ -0.78
VMP1-211ENST00000591315 NDUFAB1O14561 156 aa10.15□□□□□ -0.78
VMP1-211ENST00000591315 CASKO14936 926 aa10.15□□□□□ -0.78
VMP1-211ENST00000591315 TRAF3IP2O43734 574 aaPredicted RBP10.15□□□□□ -0.78
VMP1-211ENST00000591315 OR2T1O43869 369 aa10.15□□□□□ -0.78
VMP1-211ENST00000591315 UPK3AO75631 287 aa10.15□□□□□ -0.78
VMP1-211ENST00000591315 SERPINI2O75830 405 aa10.15□□□□□ -0.78
VMP1-211ENST00000591315 DIRAS1O95057 198 aa10.15□□□□□ -0.78
VMP1-211ENST00000591315 OR5F1O95221 314 aa10.15□□□□□ -0.78
VMP1-211ENST00000591315 PLAUP00749 431 aa10.15□□□□□ -0.78
VMP1-211ENST00000591315 COX5AP20674 150 aa10.15□□□□□ -0.78
VMP1-211ENST00000591315 CRYGSP22914 178 aa10.15□□□□□ -0.78
VMP1-211ENST00000591315 IL32P24001 234 aa10.15□□□□□ -0.78
VMP1-211ENST00000591315 GTF2E2P29084 291 aaKnown RBP10.15□□□□□ -0.78
VMP1-211ENST00000591315 DNAJA1P31689 397 aaKnown RBP10.15□□□□□ -0.78
VMP1-211ENST00000591315 PEX19P40855 299 aa10.15□□□□□ -0.78
VMP1-211ENST00000591315 IL1RL1Q01638 556 aa10.15□□□□□ -0.78
VMP1-211ENST00000591315 ITGADQ13349 1161 aa10.15□□□□□ -0.78
VMP1-211ENST00000591315 PMS2P3Q13401 168 aa10.15□□□□□ -0.78
VMP1-211ENST00000591315 TAB1Q15750 504 aa10.15□□□□□ -0.78
VMP1-211ENST00000591315 ZNF74Q16587 644 aa10.15□□□□□ -0.78
VMP1-211ENST00000591315 IFI44LQ53G44 452 aa10.15□□□□□ -0.78
VMP1-211ENST00000591315 PHYHD1Q5SRE7 291 aa10.15□□□□□ -0.78
VMP1-211ENST00000591315 TTC33Q6PID6 262 aaPredicted RBP10.15□□□□□ -0.78
VMP1-211ENST00000591315 SLC46A3Q7Z3Q1 461 aa10.15□□□□□ -0.78
VMP1-211ENST00000591315 KISS1RQ969F8 398 aaPredicted RBP10.15□□□□□ -0.78
VMP1-211ENST00000591315 TMEM45BQ96B21 275 aa10.15□□□□□ -0.78
VMP1-211ENST00000591315 OXGR1Q96P68 337 aa10.15□□□□□ -0.78
VMP1-211ENST00000591315 EPYCQ99645 322 aa10.15□□□□□ -0.78
VMP1-211ENST00000591315 EMC6Q9BV81 110 aa10.15□□□□□ -0.78
VMP1-211ENST00000591315 MAN2C1Q9NTJ4 1040 aa10.15□□□□□ -0.78
VMP1-211ENST00000591315 RTTNQ86VV8 2226 aa10.15□□□□□ -0.78
VMP1-211ENST00000591315 ITPR3Q14573 2671 aa10.15□□□□□ -0.78
VMP1-211ENST00000591315 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP10.14□□□□□ -0.79
VMP1-211ENST00000591315 ENO4A6NNW6 628 aa10.14□□□□□ -0.79
VMP1-211ENST00000591315 C11orf98E9PRG8 122 aa10.14□□□□□ -0.79
VMP1-211ENST00000591315 ARPC2O15144 300 aa10.14□□□□□ -0.79
VMP1-211ENST00000591315 RAD51DO75771 328 aa10.14□□□□□ -0.79
VMP1-211ENST00000591315 PDE5AO76074 875 aa10.14□□□□□ -0.79
VMP1-211ENST00000591315 ZNF432O94892 652 aa10.14□□□□□ -0.79
VMP1-211ENST00000591315 PRSS23O95084 383 aa10.14□□□□□ -0.79
VMP1-211ENST00000591315 IFNW1P05000 195 aa10.14□□□□□ -0.79
VMP1-211ENST00000591315 HSD17B1P14061 328 aa10.14□□□□□ -0.79
VMP1-211ENST00000591315 NQO1P15559 274 aaKnown RBP10.14□□□□□ -0.79
VMP1-211ENST00000591315 CDH2P19022 906 aaPredicted RBP10.14□□□□□ -0.79
VMP1-211ENST00000591315 P2RY6Q15077 328 aa10.14□□□□□ -0.79
VMP1-211ENST00000591315 STK11Q15831 433 aa10.14□□□□□ -0.79
VMP1-211ENST00000591315 FXNQ16595 210 aa10.14□□□□□ -0.79
VMP1-211ENST00000591315 SAMD4BQ5PRF9 694 aaKnown RBP10.14□□□□□ -0.79
VMP1-211ENST00000591315 CARD17Q5XLA6 110 aa10.14□□□□□ -0.79
VMP1-211ENST00000591315 FBXW10Q5XX13 1052 aa10.14□□□□□ -0.79
VMP1-211ENST00000591315 NIPAL3Q6P499 406 aa10.14□□□□□ -0.79
VMP1-211ENST00000591315 TBPL2Q6SJ96 375 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms