RNA–Protein interactions for RNA: ENST00000588867.1

NPC1-207, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 5

Gene NPC1, Length 2,000 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-207ENST00000588867 CLDN15P56746 228 aa13□□□□□ -0.33
NPC1-207ENST00000588867 CLDN18P56856 261 aa13□□□□□ -0.33
NPC1-207ENST00000588867 ERVK-25P63136 954 aa13□□□□□ -0.33
NPC1-207ENST00000588867 INAQ16352 499 aa13□□□□□ -0.33
NPC1-207ENST00000588867 SNAPC1Q16533 368 aa13□□□□□ -0.33
NPC1-207ENST00000588867 PGGHGQ32M88 737 aa13□□□□□ -0.33
NPC1-207ENST00000588867 VASNQ6EMK4 673 aa13□□□□□ -0.33
NPC1-207ENST00000588867 TMEM225Q6GV28 225 aa13□□□□□ -0.33
NPC1-207ENST00000588867 FAM180AQ6UWF9 173 aa13□□□□□ -0.33
NPC1-207ENST00000588867 CCDC71Q8IV32 467 aaPredicted RBP13□□□□□ -0.33
NPC1-207ENST00000588867 MEIOBQ8N635 442 aa13□□□□□ -0.33
NPC1-207ENST00000588867 OR10D3Q8NH80 312 aa13□□□□□ -0.33
NPC1-207ENST00000588867 TIMP4Q99727 224 aa13□□□□□ -0.33
NPC1-207ENST00000588867 KATNB1Q9BVA0 655 aa13□□□□□ -0.33
NPC1-207ENST00000588867 NDEL1Q9GZM8 345 aa13□□□□□ -0.33
NPC1-207ENST00000588867 SPRR3Q9UBC9 169 aa13□□□□□ -0.33
NPC1-207ENST00000588867 AASSQ9UDR5 926 aa13□□□□□ -0.33
NPC1-207ENST00000588867 B3GALT5Q9Y2C3 310 aa13□□□□□ -0.33
NPC1-207ENST00000588867 LRCH1Q9Y2L9 728 aa13□□□□□ -0.33
NPC1-207ENST00000588867 ADAM18Q9Y3Q7 739 aa13□□□□□ -0.33
NPC1-207ENST00000588867 PCDHGB5Q9Y5G0 923 aa13□□□□□ -0.33
NPC1-207ENST00000588867 IER3IP1Q9Y5U9 82 aa13□□□□□ -0.33
NPC1-207ENST00000588867 PIEZO2Q9H5I5 2752 aa13□□□□□ -0.33
NPC1-207ENST00000588867 IGHV3-15A0A0B4J1V0 119 aa13□□□□□ -0.33
NPC1-207ENST00000588867 MS4A18H0YCH9 400 aa13□□□□□ -0.33
NPC1-207ENST00000588867 BHLHE40O14503 412 aa13□□□□□ -0.33
NPC1-207ENST00000588867 IGHG3P01860 377 aa13□□□□□ -0.33
NPC1-207ENST00000588867 ZNF708P17019 499 aa13□□□□□ -0.33
NPC1-207ENST00000588867 PUDPQ08623 228 aa13□□□□□ -0.33
NPC1-207ENST00000588867 PDK3Q15120 406 aa13□□□□□ -0.33
NPC1-207ENST00000588867 MS4A18Q3C1V0 323 aa13□□□□□ -0.33
NPC1-207ENST00000588867 C12orf73Q69YU5 71 aa13□□□□□ -0.33
NPC1-207ENST00000588867 DPY19L2P2Q6ZN68 376 aa13□□□□□ -0.33
NPC1-207ENST00000588867 PTCHD4Q6ZW05 846 aa13□□□□□ -0.33
NPC1-207ENST00000588867 THAP5Q7Z6K1 395 aa13□□□□□ -0.33
NPC1-207ENST00000588867 GPAT4Q86UL3 456 aa13□□□□□ -0.33
NPC1-207ENST00000588867 CCDC103Q8IW40 242 aa13□□□□□ -0.33
NPC1-207ENST00000588867 DEPDC4Q8N2C3 294 aa13□□□□□ -0.33
NPC1-207ENST00000588867 SLC38A2Q96QD8 506 aa13□□□□□ -0.33
NPC1-207ENST00000588867 IL4I1Q96RQ9 567 aa13□□□□□ -0.33
NPC1-207ENST00000588867 NAA11Q9BSU3 229 aaPredicted RBP13□□□□□ -0.33
NPC1-207ENST00000588867 SRXN1Q9BYN0 137 aa13□□□□□ -0.33
NPC1-207ENST00000588867 TIGARQ9NQ88 270 aa13□□□□□ -0.33
NPC1-207ENST00000588867 INIPQ9NRY2 104 aa13□□□□□ -0.33
NPC1-207ENST00000588867 UBAP1Q9NZ09 502 aa13□□□□□ -0.33
NPC1-207ENST00000588867 ZNHIT1O43257 154 aa12.99□□□□□ -0.33
NPC1-207ENST00000588867 EIF1BO60739 113 aaKnown RBP12.99□□□□□ -0.33
NPC1-207ENST00000588867 TSPAN19P0C672 248 aa12.99□□□□□ -0.33
NPC1-207ENST00000588867 KLK2P20151 261 aa12.99□□□□□ -0.33
NPC1-207ENST00000588867 RPS6KA3P51812 740 aa12.99□□□□□ -0.33
NPC1-207ENST00000588867 RAC3P60763 192 aa12.99□□□□□ -0.33
NPC1-207ENST00000588867 ISL1P61371 349 aa12.99□□□□□ -0.33
NPC1-207ENST00000588867 HSF1Q00613 529 aa12.99□□□□□ -0.33
NPC1-207ENST00000588867 FOXK2Q01167 660 aa12.99□□□□□ -0.33
NPC1-207ENST00000588867 TOP3AQ13472 1001 aaPredicted RBP12.99□□□□□ -0.33
NPC1-207ENST00000588867 C3AR1Q16581 482 aa12.99□□□□□ -0.33
NPC1-207ENST00000588867 PAQR6Q6TCH4 344 aa12.99□□□□□ -0.33
NPC1-207ENST00000588867 SIAH3Q8IW03 269 aa12.99□□□□□ -0.33
NPC1-207ENST00000588867 ENTHD1Q8IYW4 607 aa12.99□□□□□ -0.33
NPC1-207ENST00000588867 SLC43A2Q8N370 569 aa12.99□□□□□ -0.33
NPC1-207ENST00000588867 LNX2Q8N448 690 aa12.99□□□□□ -0.33
NPC1-207ENST00000588867 MARVELD2Q8N4S9 558 aa12.99□□□□□ -0.33
NPC1-207ENST00000588867 CISD2Q8N5K1 135 aaKnown RBP12.99□□□□□ -0.33
NPC1-207ENST00000588867 TCEANCQ8N8B7 351 aa12.99□□□□□ -0.33
NPC1-207ENST00000588867 Q8NA96 180 aa12.99□□□□□ -0.33
NPC1-207ENST00000588867 LRRC75AQ8NAA5 344 aa12.99□□□□□ -0.33
NPC1-207ENST00000588867 ZHX1-C8orf76Q96EF9 292 aa12.99□□□□□ -0.33
NPC1-207ENST00000588867 ZNF845Q96IR2 970 aaPredicted RBP12.99□□□□□ -0.33
NPC1-207ENST00000588867 PLEKHA8Q96JA3 519 aa12.99□□□□□ -0.33
NPC1-207ENST00000588867 ADGRG7Q96K78 797 aa12.99□□□□□ -0.33
NPC1-207ENST00000588867 POLDIP3Q9BY77 421 aaKnown RBP12.99□□□□□ -0.33
NPC1-207ENST00000588867 NRIP3Q9NQ35 241 aa12.99□□□□□ -0.33
NPC1-207ENST00000588867 CAMK2AQ9UQM7 478 aa12.99□□□□□ -0.33
NPC1-207ENST00000588867 RNF6Q9Y252 685 aa12.99□□□□□ -0.33
NPC1-207ENST00000588867 ZNF814B7Z6K7 855 aa12.98□□□□□ -0.33
NPC1-207ENST00000588867 TLX2O43763 284 aaPredicted RBP12.98□□□□□ -0.33
NPC1-207ENST00000588867 HMGN1P05114 100 aa12.98□□□□□ -0.33
NPC1-207ENST00000588867 CD14P08571 375 aa12.98□□□□□ -0.33
NPC1-207ENST00000588867 ENPP1P22413 925 aa12.98□□□□□ -0.33
NPC1-207ENST00000588867 RPS3AP61247 264 aaKnown RBP12.98□□□□□ -0.33
NPC1-207ENST00000588867 CD47Q08722 323 aa12.98□□□□□ -0.33
NPC1-207ENST00000588867 BCL2A1Q16548 175 aa12.98□□□□□ -0.33
NPC1-207ENST00000588867 CHMP1BQ7LBR1 199 aa12.98□□□□□ -0.33
NPC1-207ENST00000588867 CNIH3Q8TBE1 160 aa12.98□□□□□ -0.33
NPC1-207ENST00000588867 UCN2Q96RP3 112 aa12.98□□□□□ -0.33
NPC1-207ENST00000588867 PRRG3Q9BZD7 231 aa12.98□□□□□ -0.33
NPC1-207ENST00000588867 SLC25A18Q9H1K4 315 aa12.98□□□□□ -0.33
NPC1-207ENST00000588867 GRHPRQ9UBQ7 328 aa12.98□□□□□ -0.33
NPC1-207ENST00000588867 BAIAP2Q9UQB8 552 aa12.98□□□□□ -0.33
NPC1-207ENST00000588867 GPR52Q9Y2T5 361 aa12.98□□□□□ -0.33
NPC1-207ENST00000588867 ATMQ13315 3056 aa12.98□□□□□ -0.33
NPC1-207ENST00000588867 DSPP15924 2871 aaKnown RBP12.98□□□□□ -0.33
NPC1-207ENST00000588867 A0A1B0GTH9 108 aa12.98□□□□□ -0.33
NPC1-207ENST00000588867 AQP7P3A6NL99 342 aa12.98□□□□□ -0.33
NPC1-207ENST00000588867 NPIPA2E9PIF3 369 aa12.98□□□□□ -0.33
NPC1-207ENST00000588867 NPIPA3F8WFD2 350 aa12.98□□□□□ -0.33
NPC1-207ENST00000588867 PRKYO43930 277 aa12.98□□□□□ -0.33
NPC1-207ENST00000588867 RAMP1O60894 148 aa12.98□□□□□ -0.33
NPC1-207ENST00000588867 SLC2A10O95528 541 aa12.98□□□□□ -0.33
NPC1-207ENST00000588867 HLA-DOBP13765 273 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms