RNA–Protein interactions for RNA: ENST00000588855.5

CLPTM1-209, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 1 (best)

Gene CLPTM1, Length 1,522 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-209ENST00000588855 ZNF629Q9UEG4 869 aaPredicted RBP16.88■□□□□ 0.29
CLPTM1-209ENST00000588855 B3GALT5Q9Y2C3 310 aa16.88■□□□□ 0.29
CLPTM1-209ENST00000588855 EMC9Q9Y3B6 208 aa16.88■□□□□ 0.29
CLPTM1-209ENST00000588855 FAM90A27PA6NNH2 459 aa16.87■□□□□ 0.29
CLPTM1-209ENST00000588855 DVL2O14641 736 aa16.87■□□□□ 0.29
CLPTM1-209ENST00000588855 TIPRLO75663 272 aa16.87■□□□□ 0.29
CLPTM1-209ENST00000588855 IL18BPO95998 194 aa16.87■□□□□ 0.29
CLPTM1-209ENST00000588855 YES1P07947 543 aa16.87■□□□□ 0.29
CLPTM1-209ENST00000588855 AGAP20933 346 aa16.87■□□□□ 0.29
CLPTM1-209ENST00000588855 OPRM1P35372 400 aa16.87■□□□□ 0.29
CLPTM1-209ENST00000588855 GPR4P46093 362 aa16.87■□□□□ 0.29
CLPTM1-209ENST00000588855 HMGA2P52926 109 aa16.87■□□□□ 0.29
CLPTM1-209ENST00000588855 PMS2P3Q13401 168 aa16.87■□□□□ 0.29
CLPTM1-209ENST00000588855 PDK3Q15120 406 aa16.87■□□□□ 0.29
CLPTM1-209ENST00000588855 TMEM201Q5SNT2 666 aa16.87■□□□□ 0.29
CLPTM1-209ENST00000588855 XKRXQ6PP77 449 aa16.87■□□□□ 0.29
CLPTM1-209ENST00000588855 OR9K2Q8NGE7 335 aa16.87■□□□□ 0.29
CLPTM1-209ENST00000588855 CA5BP1Q8WTZ4 195 aa16.87■□□□□ 0.29
CLPTM1-209ENST00000588855 DUS3LQ96G46 650 aaKnown RBP16.87■□□□□ 0.29
CLPTM1-209ENST00000588855 FAM46AQ96IP4 442 aaKnown RBP16.87■□□□□ 0.29
CLPTM1-209ENST00000588855 REEP1Q9H902 201 aa16.87■□□□□ 0.29
CLPTM1-209ENST00000588855 B3GAT1Q9P2W7 334 aa16.87■□□□□ 0.29
CLPTM1-209ENST00000588855 TMCC3Q9ULS5 477 aa16.87■□□□□ 0.29
CLPTM1-209ENST00000588855 RASD1Q9Y272 281 aa16.87■□□□□ 0.29
CLPTM1-209ENST00000588855 SAMHD1Q9Y3Z3 626 aaKnown RBP16.87■□□□□ 0.29
CLPTM1-209ENST00000588855 FLVCR1Q9Y5Y0 555 aa16.87■□□□□ 0.29
CLPTM1-209ENST00000588855 U3KQV3 271 aa16.87■□□□□ 0.29
CLPTM1-209ENST00000588855 UTP20O75691 2785 aaKnown RBP16.87■□□□□ 0.29
CLPTM1-209ENST00000588855 FREM1Q5H8C1 2179 aa16.86■□□□□ 0.29
CLPTM1-209ENST00000588855 ZNF724A8MTY0 619 aa16.86■□□□□ 0.29
CLPTM1-209ENST00000588855 MS4A18H0YCH9 400 aa16.86■□□□□ 0.29
CLPTM1-209ENST00000588855 PLPP3O14495 311 aa16.86■□□□□ 0.29
CLPTM1-209ENST00000588855 HPRP00739 348 aa16.86■□□□□ 0.29
CLPTM1-209ENST00000588855 OMPP47874 163 aa16.86■□□□□ 0.29
CLPTM1-209ENST00000588855 LAPTM4AQ15012 233 aa16.86■□□□□ 0.29
CLPTM1-209ENST00000588855 MS4A18Q3C1V0 323 aa16.86■□□□□ 0.29
CLPTM1-209ENST00000588855 NUFIP2Q7Z417 695 aaKnown RBP16.86■□□□□ 0.29
CLPTM1-209ENST00000588855 NANOGNBQ7Z5D8 188 aa16.86■□□□□ 0.29
CLPTM1-209ENST00000588855 BTLAQ7Z6A9 289 aa16.86■□□□□ 0.29
CLPTM1-209ENST00000588855 OR6K3Q8NGY3 331 aa16.86■□□□□ 0.29
CLPTM1-209ENST00000588855 LIPHQ8WWY8 451 aa16.86■□□□□ 0.29
CLPTM1-209ENST00000588855 STARD4Q96DR4 205 aa16.86■□□□□ 0.29
CLPTM1-209ENST00000588855 SF3B5Q9BWJ5 86 aaKnown RBP16.86■□□□□ 0.29
CLPTM1-209ENST00000588855 UCK2Q9BZX2 261 aa16.86■□□□□ 0.29
CLPTM1-209ENST00000588855 C12orf49Q9H741 205 aa16.86■□□□□ 0.29
CLPTM1-209ENST00000588855 EMC3Q9P0I2 261 aa16.86■□□□□ 0.29
CLPTM1-209ENST00000588855 ADGRG4Q8IZF6 3080 aa16.86■□□□□ 0.29
CLPTM1-209ENST00000588855 HTR3EA5X5Y0 456 aa16.86■□□□□ 0.29
CLPTM1-209ENST00000588855 CDC42EP2O14613 210 aa16.86■□□□□ 0.29
CLPTM1-209ENST00000588855 VAMP5O95183 116 aa16.86■□□□□ 0.29
CLPTM1-209ENST00000588855 ADORA3P0DMS8 318 aa16.86■□□□□ 0.29
CLPTM1-209ENST00000588855 SAGP10523 405 aaPredicted RBP16.86■□□□□ 0.29
CLPTM1-209ENST00000588855 IST1P53990 364 aa16.86■□□□□ 0.29
CLPTM1-209ENST00000588855 IL1RL1Q01638 556 aa16.86■□□□□ 0.29
CLPTM1-209ENST00000588855 PUDPQ08623 228 aa16.86■□□□□ 0.29
CLPTM1-209ENST00000588855 LILRB4Q8NHJ6 448 aa16.86■□□□□ 0.29
CLPTM1-209ENST00000588855 PYDC1Q8WXC3 89 aa16.86■□□□□ 0.29
CLPTM1-209ENST00000588855 TACO1Q9BSH4 297 aaKnown RBP16.86■□□□□ 0.29
CLPTM1-209ENST00000588855 ARMC1Q9NVT9 282 aa16.86■□□□□ 0.29
CLPTM1-209ENST00000588855 TMEM5Q9Y2B1 443 aa16.86■□□□□ 0.29
CLPTM1-209ENST00000588855 AP4S1Q9Y587 144 aa16.86■□□□□ 0.29
CLPTM1-209ENST00000588855 NKX2-6A6NCS4 301 aa16.85■□□□□ 0.29
CLPTM1-209ENST00000588855 EFCAB9A8MZ26 197 aa16.85■□□□□ 0.29
CLPTM1-209ENST00000588855 EEF1E1-BLOC1S5C9J1V9 151 aa16.85■□□□□ 0.29
CLPTM1-209ENST00000588855 GNGT2O14610 69 aa16.85■□□□□ 0.29
CLPTM1-209ENST00000588855 EEF1E1O43324 174 aaKnown RBP16.85■□□□□ 0.29
CLPTM1-209ENST00000588855 OR10H3O60404 316 aa16.85■□□□□ 0.29
CLPTM1-209ENST00000588855 SMNDC1O75940 238 aaKnown RBP eCLIP16.85■□□□□ 0.29
CLPTM1-209ENST00000588855 CLDN14O95500 239 aa16.85■□□□□ 0.29
CLPTM1-209ENST00000588855 CGAP01215 116 aa16.85■□□□□ 0.29
CLPTM1-209ENST00000588855 HIST1H2ABP04908 130 aa16.85■□□□□ 0.29
CLPTM1-209ENST00000588855 HLA-DOBP13765 273 aa16.85■□□□□ 0.29
CLPTM1-209ENST00000588855 NTF4P34130 210 aa16.85■□□□□ 0.29
CLPTM1-209ENST00000588855 POU4F3Q15319 338 aa16.85■□□□□ 0.29
CLPTM1-209ENST00000588855 TMPRSS11FQ6ZWK6 438 aa16.85■□□□□ 0.29
CLPTM1-209ENST00000588855 HIST3H2AQ7L7L0 130 aa16.85■□□□□ 0.29
CLPTM1-209ENST00000588855 ZC3HAV1Q7Z2W4 902 aaKnown RBP16.85■□□□□ 0.29
CLPTM1-209ENST00000588855 CDK20Q8IZL9 346 aa16.85■□□□□ 0.29
CLPTM1-209ENST00000588855 OR9Q2Q8NGE9 314 aa16.85■□□□□ 0.29
CLPTM1-209ENST00000588855 OR13C2Q8NGS9 318 aa16.85■□□□□ 0.29
CLPTM1-209ENST00000588855 HIST1H2ACQ93077 130 aa16.85■□□□□ 0.29
CLPTM1-209ENST00000588855 OXGR1Q96P68 337 aa16.85■□□□□ 0.29
CLPTM1-209ENST00000588855 ZNF385AQ96PM9 386 aaKnown RBP16.85■□□□□ 0.29
CLPTM1-209ENST00000588855 GPA33Q99795 319 aa16.85■□□□□ 0.29
CLPTM1-209ENST00000588855 OPN3Q9H1Y3 402 aaPredicted RBP16.85■□□□□ 0.29
CLPTM1-209ENST00000588855 KRCC1Q9NPI7 259 aaPredicted RBP16.85■□□□□ 0.29
CLPTM1-209ENST00000588855 TAS2R5Q9NYW4 299 aa16.85■□□□□ 0.29
CLPTM1-209ENST00000588855 DNAJB9Q9UBS3 223 aa16.85■□□□□ 0.29
CLPTM1-209ENST00000588855 PROCRQ9UNN8 238 aa16.85■□□□□ 0.29
CLPTM1-209ENST00000588855 NOSIPQ9Y314 301 aaKnown RBP16.85■□□□□ 0.29
CLPTM1-209ENST00000588855 TRAV27A0A087WT01 109 aa16.84■□□□□ 0.29
CLPTM1-209ENST00000588855 C11orf98E9PRG8 122 aa16.84■□□□□ 0.29
CLPTM1-209ENST00000588855 BLOC1S5-TXNDC5H3BN57 136 aa16.84■□□□□ 0.29
CLPTM1-209ENST00000588855 GPR171O14626 319 aa16.84■□□□□ 0.29
CLPTM1-209ENST00000588855 OR6A2O95222 327 aa16.84■□□□□ 0.29
CLPTM1-209ENST00000588855 AHCYP23526 432 aa16.84■□□□□ 0.29
CLPTM1-209ENST00000588855 EDNRAP25101 427 aa16.84■□□□□ 0.29
CLPTM1-209ENST00000588855 RPL18Q07020 188 aaKnown RBP16.84■□□□□ 0.29
CLPTM1-209ENST00000588855 SLC25A35Q3KQZ1 300 aa16.84■□□□□ 0.29
CLPTM1-209ENST00000588855 EEF1A1P5Q5VTE0 462 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms