RNA–Protein interactions for RNA: ENST00000588131.1

VMP1-207, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-207ENST00000588131 CHST11Q9NPF2 352 aa10.14□□□□□ -0.79
VMP1-207ENST00000588131 NRIP3Q9NQ35 241 aa10.14□□□□□ -0.79
VMP1-207ENST00000588131 ZNF71Q9NQZ8 489 aaPredicted RBP10.14□□□□□ -0.79
VMP1-207ENST00000588131 IMPAD1Q9NX62 359 aa10.14□□□□□ -0.79
VMP1-207ENST00000588131 SPRR3Q9UBC9 169 aa10.14□□□□□ -0.79
VMP1-207ENST00000588131 B3GNT3Q9Y2A9 372 aa10.14□□□□□ -0.79
VMP1-207ENST00000588131 ADAM18Q9Y3Q7 739 aa10.14□□□□□ -0.79
VMP1-207ENST00000588131 CORINQ9Y5Q5 1042 aa10.14□□□□□ -0.79
VMP1-207ENST00000588131 IER3IP1Q9Y5U9 82 aa10.14□□□□□ -0.79
VMP1-207ENST00000588131 HSPE1-MOB4S4R3N1 261 aa10.14□□□□□ -0.79
VMP1-207ENST00000588131 TRGV5A0A0B4J1U4 118 aa10.13□□□□□ -0.79
VMP1-207ENST00000588131 IGHV3-15A0A0B4J1V0 119 aa10.13□□□□□ -0.79
VMP1-207ENST00000588131 C11orf98E9PRG8 122 aa10.13□□□□□ -0.79
VMP1-207ENST00000588131 LINC01387J3KSC0 135 aa10.13□□□□□ -0.79
VMP1-207ENST00000588131 RAMP1O60894 148 aa10.13□□□□□ -0.79
VMP1-207ENST00000588131 WBP4O75554 376 aaKnown RBP10.13□□□□□ -0.79
VMP1-207ENST00000588131 PLGP00747 810 aaPredicted RBP10.13□□□□□ -0.79
VMP1-207ENST00000588131 RPSAP08865 295 aaKnown RBP10.13□□□□□ -0.79
VMP1-207ENST00000588131 FMO3P31513 532 aa10.13□□□□□ -0.79
VMP1-207ENST00000588131 CLDN18P56856 261 aa10.13□□□□□ -0.79
VMP1-207ENST00000588131 SLC35A1P78382 337 aa10.13□□□□□ -0.79
VMP1-207ENST00000588131 ZP4Q12836 540 aa10.13□□□□□ -0.79
VMP1-207ENST00000588131 SNAPC1Q16533 368 aa10.13□□□□□ -0.79
VMP1-207ENST00000588131 SLC35F1Q5T1Q4 408 aa10.13□□□□□ -0.79
VMP1-207ENST00000588131 RPUSD3Q6P087 351 aaKnown RBP10.13□□□□□ -0.79
VMP1-207ENST00000588131 ESPNLQ6ZVH7 1005 aa10.13□□□□□ -0.79
VMP1-207ENST00000588131 PTCHD4Q6ZW05 846 aa10.13□□□□□ -0.79
VMP1-207ENST00000588131 H1FNTQ75WM6 255 aaPredicted RBP10.13□□□□□ -0.79
VMP1-207ENST00000588131 SIAH3Q8IW03 269 aa10.13□□□□□ -0.79
VMP1-207ENST00000588131 ZNF786Q8N393 782 aa10.13□□□□□ -0.79
VMP1-207ENST00000588131 TCEANCQ8N8B7 351 aa10.13□□□□□ -0.79
VMP1-207ENST00000588131 OR2V1Q8NHB1 315 aa10.13□□□□□ -0.79
VMP1-207ENST00000588131 RHOXF1Q8NHV9 184 aa10.13□□□□□ -0.79
VMP1-207ENST00000588131 C9orf43Q8TAL5 461 aaPredicted RBP10.13□□□□□ -0.79
VMP1-207ENST00000588131 NEIL3Q8TAT5 605 aa10.13□□□□□ -0.79
VMP1-207ENST00000588131 ERMAPQ96PL5 475 aaPredicted RBP10.13□□□□□ -0.79
VMP1-207ENST00000588131 SLC38A2Q96QD8 506 aa10.13□□□□□ -0.79
VMP1-207ENST00000588131 TSPAN32Q96QS1 320 aa10.13□□□□□ -0.79
VMP1-207ENST00000588131 IL4I1Q96RQ9 567 aa10.13□□□□□ -0.79
VMP1-207ENST00000588131 POLDIP3Q9BY77 421 aaKnown RBP10.13□□□□□ -0.79
VMP1-207ENST00000588131 KRTAP3-3Q9BYR6 98 aa10.13□□□□□ -0.79
VMP1-207ENST00000588131 KRTAP3-2Q9BYR7 98 aa10.13□□□□□ -0.79
VMP1-207ENST00000588131 PNPLA3Q9NST1 481 aa10.13□□□□□ -0.79
VMP1-207ENST00000588131 TNFRSF10DQ9UBN6 386 aa10.13□□□□□ -0.79
VMP1-207ENST00000588131 BAIAP2Q9UQB8 552 aa10.13□□□□□ -0.79
VMP1-207ENST00000588131 TRAPPC4Q9Y296 219 aa10.13□□□□□ -0.79
VMP1-207ENST00000588131 GPR52Q9Y2T5 361 aa10.13□□□□□ -0.79
VMP1-207ENST00000588131 ACACAQ13085 2346 aa10.13□□□□□ -0.79
VMP1-207ENST00000588131 FRYQ5TBA9 3013 aa10.13□□□□□ -0.79
VMP1-207ENST00000588131 EPG5Q9HCE0 2579 aa10.13□□□□□ -0.79
VMP1-207ENST00000588131 KIAA1549Q9HCM3 1950 aa10.12□□□□□ -0.79
VMP1-207ENST00000588131 CEP295Q9C0D2 2601 aa10.12□□□□□ -0.79
VMP1-207ENST00000588131 TEX13CA0A0J9YWL9 993 aa10.12□□□□□ -0.79
VMP1-207ENST00000588131 A0A1W2PNV4 684 aa10.12□□□□□ -0.79
VMP1-207ENST00000588131 RNF13O43567 381 aa10.12□□□□□ -0.79
VMP1-207ENST00000588131 CXCL13O43927 109 aa10.12□□□□□ -0.79
VMP1-207ENST00000588131 SERPINI2O75830 405 aa10.12□□□□□ -0.79
VMP1-207ENST00000588131 SMNDC1O75940 238 aaKnown RBP eCLIP10.12□□□□□ -0.79
VMP1-207ENST00000588131 OR6A2O95222 327 aa10.12□□□□□ -0.79
VMP1-207ENST00000588131 ACTL6AO96019 429 aa10.12□□□□□ -0.79
VMP1-207ENST00000588131 IGHG3P01860 377 aa10.12□□□□□ -0.79
VMP1-207ENST00000588131 HMGN1P05114 100 aa10.12□□□□□ -0.79
VMP1-207ENST00000588131 CD14P08571 375 aa10.12□□□□□ -0.79
VMP1-207ENST00000588131 HLA-DOBP13765 273 aa10.12□□□□□ -0.79
VMP1-207ENST00000588131 ZNF708P17019 499 aa10.12□□□□□ -0.79
VMP1-207ENST00000588131 AHCYP23526 432 aa10.12□□□□□ -0.79
VMP1-207ENST00000588131 EIF1AXP47813 144 aaKnown RBP10.12□□□□□ -0.79
VMP1-207ENST00000588131 CHN2P52757 468 aa10.12□□□□□ -0.79
VMP1-207ENST00000588131 SNRPGP62308 76 aaKnown RBP10.12□□□□□ -0.79
VMP1-207ENST00000588131 H3F3AP84243 136 aa10.12□□□□□ -0.79
VMP1-207ENST00000588131 PUDPQ08623 228 aa10.12□□□□□ -0.79
VMP1-207ENST00000588131 DBPQ10586 325 aaPredicted RBP10.12□□□□□ -0.79
VMP1-207ENST00000588131 TOP3AQ13472 1001 aaPredicted RBP10.12□□□□□ -0.79
VMP1-207ENST00000588131 C3AR1Q16581 482 aa10.12□□□□□ -0.79
VMP1-207ENST00000588131 ZNF239Q16600 458 aaKnown RBP10.12□□□□□ -0.79
VMP1-207ENST00000588131 SMN1Q16637 294 aaKnown RBP10.12□□□□□ -0.79
VMP1-207ENST00000588131 C6orf141Q5SZD1 244 aa10.12□□□□□ -0.79
VMP1-207ENST00000588131 ZNF362Q5T0B9 420 aaPredicted RBP10.12□□□□□ -0.79
VMP1-207ENST00000588131 HBMQ6B0K9 141 aa10.12□□□□□ -0.79
VMP1-207ENST00000588131 ARHGAP11AQ6P4F7 1023 aa10.12□□□□□ -0.79
VMP1-207ENST00000588131 FAM122BQ7Z309 247 aa10.12□□□□□ -0.79
VMP1-207ENST00000588131 BCDIN3DQ7Z5W3 292 aaKnown RBP10.12□□□□□ -0.79
VMP1-207ENST00000588131 LSM14AQ8ND56 463 aaKnown RBP10.12□□□□□ -0.79
VMP1-207ENST00000588131 ADPRHL1Q8NDY3 354 aa10.12□□□□□ -0.79
VMP1-207ENST00000588131 OR10D3Q8NH80 312 aa10.12□□□□□ -0.79
VMP1-207ENST00000588131 TMEM163Q8TC26 289 aa10.12□□□□□ -0.79
VMP1-207ENST00000588131 ABTB1Q969K4 478 aaPredicted RBP10.12□□□□□ -0.79
VMP1-207ENST00000588131 RASD2Q96D21 266 aa10.12□□□□□ -0.79
VMP1-207ENST00000588131 ZNF845Q96IR2 970 aaPredicted RBP10.12□□□□□ -0.79
VMP1-207ENST00000588131 Q96M85 177 aa10.12□□□□□ -0.79
VMP1-207ENST00000588131 NR1H4Q96RI1 486 aaPredicted RBP10.12□□□□□ -0.79
VMP1-207ENST00000588131 UCN2Q96RP3 112 aa10.12□□□□□ -0.79
VMP1-207ENST00000588131 ARHGAP9Q9BRR9 750 aa10.12□□□□□ -0.79
VMP1-207ENST00000588131 PRRG3Q9BZD7 231 aa10.12□□□□□ -0.79
VMP1-207ENST00000588131 LDAHQ9H6V9 325 aa10.12□□□□□ -0.79
VMP1-207ENST00000588131 EXO5Q9H790 373 aa10.12□□□□□ -0.79
VMP1-207ENST00000588131 CMC2Q9NRP2 79 aa10.12□□□□□ -0.79
VMP1-207ENST00000588131 INIPQ9NRY2 104 aa10.12□□□□□ -0.79
VMP1-207ENST00000588131 B3GAT1Q9P2W7 334 aa10.12□□□□□ -0.79
VMP1-207ENST00000588131 ZNF346Q9UL40 294 aaKnown RBP10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms