RNA–Protein interactions for RNA: ENST00000586892.1

SMARCA4-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 4

Gene SMARCA4, Length 559 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-210ENST00000586892 ZNF426Q9BUY5 554 aa11.73□□□□□ -0.53
SMARCA4-210ENST00000586892 SLCO5A1Q9H2Y9 848 aa11.73□□□□□ -0.53
SMARCA4-210ENST00000586892 SLC7A10Q9NS82 523 aa11.73□□□□□ -0.53
SMARCA4-210ENST00000586892 FAM53CQ9NYF3 392 aa11.73□□□□□ -0.53
SMARCA4-210ENST00000586892 MRPL39Q9NYK5 338 aaKnown RBP11.73□□□□□ -0.53
SMARCA4-210ENST00000586892 GMPR2Q9P2T1 348 aaKnown RBP11.73□□□□□ -0.53
SMARCA4-210ENST00000586892 B3GAT1Q9P2W7 334 aa11.73□□□□□ -0.53
SMARCA4-210ENST00000586892 SEC14L4Q9UDX3 406 aa11.73□□□□□ -0.53
SMARCA4-210ENST00000586892 TAGLN3Q9UI15 199 aa11.73□□□□□ -0.53
SMARCA4-210ENST00000586892 ST6GALNAC2Q9UJ37 374 aa11.73□□□□□ -0.53
SMARCA4-210ENST00000586892 RCE1Q9Y256 329 aa11.73□□□□□ -0.53
SMARCA4-210ENST00000586892 MAP1AP78559 2803 aaPredicted RBP11.73□□□□□ -0.53
SMARCA4-210ENST00000586892 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.72□□□□□ -0.53
SMARCA4-210ENST00000586892 A0A1W2PPR1 153 aa11.72□□□□□ -0.53
SMARCA4-210ENST00000586892 CIB4A0PJX0 185 aa11.72□□□□□ -0.53
SMARCA4-210ENST00000586892 OR5H1A6NKK0 313 aa11.72□□□□□ -0.53
SMARCA4-210ENST00000586892 PDLIM1O00151 329 aa11.72□□□□□ -0.53
SMARCA4-210ENST00000586892 KLF4O43474 513 aa11.72□□□□□ -0.53
SMARCA4-210ENST00000586892 SHOX2O60902 331 aaPredicted RBP11.72□□□□□ -0.53
SMARCA4-210ENST00000586892 NQO1P15559 274 aaKnown RBP11.72□□□□□ -0.53
SMARCA4-210ENST00000586892 PTNP21246 168 aa11.72□□□□□ -0.53
SMARCA4-210ENST00000586892 CBLP22681 906 aa11.72□□□□□ -0.53
SMARCA4-210ENST00000586892 IFNA8P32881 189 aa11.72□□□□□ -0.53
SMARCA4-210ENST00000586892 RBM34P42696 430 aaKnown RBP11.72□□□□□ -0.53
SMARCA4-210ENST00000586892 MNAT1P51948 309 aa11.72□□□□□ -0.53
SMARCA4-210ENST00000586892 TGFBR3Q03167 851 aa11.72□□□□□ -0.53
SMARCA4-210ENST00000586892 C1DQ13901 141 aaKnown RBP11.72□□□□□ -0.53
SMARCA4-210ENST00000586892 STK11Q15831 433 aa11.72□□□□□ -0.53
SMARCA4-210ENST00000586892 TSPO2Q5TGU0 170 aa11.72□□□□□ -0.53
SMARCA4-210ENST00000586892 PAMR1Q6UXH9 720 aa11.72□□□□□ -0.53
SMARCA4-210ENST00000586892 KDM8Q8N371 416 aa11.72□□□□□ -0.53
SMARCA4-210ENST00000586892 C10orf53Q8N6V4 93 aa11.72□□□□□ -0.53
SMARCA4-210ENST00000586892 C1orf162Q8NEQ5 155 aaPredicted RBP11.72□□□□□ -0.53
SMARCA4-210ENST00000586892 GEMIN6Q8WXD5 167 aaKnown RBP11.72□□□□□ -0.53
SMARCA4-210ENST00000586892 MUCL1Q96DR8 90 aa11.72□□□□□ -0.53
SMARCA4-210ENST00000586892 MOGAT1Q96PD6 335 aa11.72□□□□□ -0.53
SMARCA4-210ENST00000586892 PRSS27Q9BQR3 290 aa11.72□□□□□ -0.53
SMARCA4-210ENST00000586892 NDE1Q9NXR1 346 aa11.72□□□□□ -0.53
SMARCA4-210ENST00000586892 ADA2Q9NZK5 511 aa11.72□□□□□ -0.53
SMARCA4-210ENST00000586892 AKAP8O43823 692 aaKnown RBP11.71□□□□□ -0.53
SMARCA4-210ENST00000586892 RAD51DO75771 328 aa11.71□□□□□ -0.53
SMARCA4-210ENST00000586892 KRT33AO76009 404 aa11.71□□□□□ -0.53
SMARCA4-210ENST00000586892 ZNF682O95780 498 aa11.71□□□□□ -0.53
SMARCA4-210ENST00000586892 SERPINA1P01009 418 aa11.71□□□□□ -0.53
SMARCA4-210ENST00000586892 IGF2P01344 180 aa11.71□□□□□ -0.53
SMARCA4-210ENST00000586892 RAF1P04049 648 aa11.71□□□□□ -0.53
SMARCA4-210ENST00000586892 IFNW1P05000 195 aa11.71□□□□□ -0.53
SMARCA4-210ENST00000586892 ITGA5P08648 1049 aa11.71□□□□□ -0.53
SMARCA4-210ENST00000586892 DNASE1P24855 282 aa11.71□□□□□ -0.53
SMARCA4-210ENST00000586892 LOXP28300 417 aaPredicted RBP11.71□□□□□ -0.53
SMARCA4-210ENST00000586892 MPGP29372 298 aa11.71□□□□□ -0.53
SMARCA4-210ENST00000586892 SELENOPP49908 381 aa11.71□□□□□ -0.53
SMARCA4-210ENST00000586892 CLDN17P56750 224 aa11.71□□□□□ -0.53
SMARCA4-210ENST00000586892 IL1RL1Q01638 556 aa11.71□□□□□ -0.53
SMARCA4-210ENST00000586892 LTBQ06643 244 aa11.71□□□□□ -0.53
SMARCA4-210ENST00000586892 PUDPQ08623 228 aa11.71□□□□□ -0.53
SMARCA4-210ENST00000586892 PMS2P3Q13401 168 aa11.71□□□□□ -0.53
SMARCA4-210ENST00000586892 PIN1Q13526 163 aaPredicted RBP11.71□□□□□ -0.53
SMARCA4-210ENST00000586892 KRT72Q14CN4 511 aa11.71□□□□□ -0.53
SMARCA4-210ENST00000586892 PPA1Q15181 289 aa11.71□□□□□ -0.53
SMARCA4-210ENST00000586892 C1QTNF12Q5T7M4 302 aa11.71□□□□□ -0.53
SMARCA4-210ENST00000586892 ALKBH2Q6NS38 261 aa11.71□□□□□ -0.53
SMARCA4-210ENST00000586892 NIPAL3Q6P499 406 aa11.71□□□□□ -0.53
SMARCA4-210ENST00000586892 CBLL1Q75N03 491 aa11.71□□□□□ -0.53
SMARCA4-210ENST00000586892 VTCN1Q7Z7D3 282 aa11.71□□□□□ -0.53
SMARCA4-210ENST00000586892 UEVLDQ8IX04 471 aa11.71□□□□□ -0.53
SMARCA4-210ENST00000586892 PGAM4Q8N0Y7 254 aa11.71□□□□□ -0.53
SMARCA4-210ENST00000586892 C17orf78Q8N4C9 275 aa11.71□□□□□ -0.53
SMARCA4-210ENST00000586892 OR5J2Q8NH18 312 aa11.71□□□□□ -0.53
SMARCA4-210ENST00000586892 FAM162AQ96A26 154 aa11.71□□□□□ -0.53
SMARCA4-210ENST00000586892 PLPPR2Q96GM1 343 aa11.71□□□□□ -0.53
SMARCA4-210ENST00000586892 PRRC1Q96M27 445 aa11.71□□□□□ -0.53
SMARCA4-210ENST00000586892 MUS81Q96NY9 551 aa11.71□□□□□ -0.53
SMARCA4-210ENST00000586892 HS3ST6Q96QI5 342 aa11.71□□□□□ -0.53
SMARCA4-210ENST00000586892 AMBRA1Q9C0C7 1298 aa11.71□□□□□ -0.53
SMARCA4-210ENST00000586892 LIME1Q9H400 295 aa11.71□□□□□ -0.53
SMARCA4-210ENST00000586892 ESRP2Q9H6T0 727 aaKnown RBP11.71□□□□□ -0.53
SMARCA4-210ENST00000586892 FKRPQ9H9S5 495 aa11.71□□□□□ -0.53
SMARCA4-210ENST00000586892 ARL8BQ9NVJ2 186 aa11.71□□□□□ -0.53
SMARCA4-210ENST00000586892 RIMS3Q9UJD0 308 aa11.71□□□□□ -0.53
SMARCA4-210ENST00000586892 ZNF229Q9UJW7 825 aa11.71□□□□□ -0.53
SMARCA4-210ENST00000586892 NOX1Q9Y5S8 564 aa11.71□□□□□ -0.53
SMARCA4-210ENST00000586892 CADP27708 2225 aa11.7□□□□□ -0.54
SMARCA4-210ENST00000586892 ALPK2Q86TB3 2170 aa11.7□□□□□ -0.54
SMARCA4-210ENST00000586892 ZNF587BE7ETH6 402 aa11.7□□□□□ -0.54
SMARCA4-210ENST00000586892 LRRN3E7EW58 273 aa11.7□□□□□ -0.54
SMARCA4-210ENST00000586892 MS4A18H0YCH9 400 aa11.7□□□□□ -0.54
SMARCA4-210ENST00000586892 KPNA4O00629 521 aaPredicted RBP11.7□□□□□ -0.54
SMARCA4-210ENST00000586892 PLPP3O14495 311 aa11.7□□□□□ -0.54
SMARCA4-210ENST00000586892 TRAF3IP2O43734 574 aaPredicted RBP11.7□□□□□ -0.54
SMARCA4-210ENST00000586892 GMNNO75496 209 aa11.7□□□□□ -0.54
SMARCA4-210ENST00000586892 ZNF432O94892 652 aa11.7□□□□□ -0.54
SMARCA4-210ENST00000586892 MT-ND1P03886 318 aa11.7□□□□□ -0.54
SMARCA4-210ENST00000586892 ST3GAL3Q11203 375 aa11.7□□□□□ -0.54
SMARCA4-210ENST00000586892 KEAP1Q14145 624 aa11.7□□□□□ -0.54
SMARCA4-210ENST00000586892 GABRA6Q16445 453 aa11.7□□□□□ -0.54
SMARCA4-210ENST00000586892 ZNF74Q16587 644 aa11.7□□□□□ -0.54
SMARCA4-210ENST00000586892 MS4A18Q3C1V0 323 aa11.7□□□□□ -0.54
SMARCA4-210ENST00000586892 IFI44LQ53G44 452 aa11.7□□□□□ -0.54
SMARCA4-210ENST00000586892 SAMD4BQ5PRF9 694 aaKnown RBP11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms