RNA–Protein interactions for RNA: ENST00000586813.5

TRAF4-216, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 789 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-216ENST00000586813 GTDC1Q4AE62 458 aa16.82■□□□□ 0.28
TRAF4-216ENST00000586813 ATG16L1Q676U5 607 aa16.82■□□□□ 0.28
TRAF4-216ENST00000586813 NXNQ6DKJ4 435 aa16.82■□□□□ 0.28
TRAF4-216ENST00000586813 VHLLQ6RSH7 139 aa16.82■□□□□ 0.28
TRAF4-216ENST00000586813 IL17RELQ6ZVW7 336 aa16.82■□□□□ 0.28
TRAF4-216ENST00000586813 ANKRD42Q8N9B4 389 aa16.82■□□□□ 0.28
TRAF4-216ENST00000586813 MFSD8Q8NHS3 518 aa16.82■□□□□ 0.28
TRAF4-216ENST00000586813 VPS33AQ96AX1 596 aa16.82■□□□□ 0.28
TRAF4-216ENST00000586813 FOXN4Q96NZ1 517 aa16.82■□□□□ 0.28
TRAF4-216ENST00000586813 PTDSS2Q9BVG9 487 aa16.82■□□□□ 0.28
TRAF4-216ENST00000586813 PLK3Q9H4B4 646 aa16.82■□□□□ 0.28
TRAF4-216ENST00000586813 ARMC7Q9H6L4 198 aa16.82■□□□□ 0.28
TRAF4-216ENST00000586813 SEC61A2Q9H9S3 476 aa16.82■□□□□ 0.28
TRAF4-216ENST00000586813 CACYBPQ9HB71 228 aaKnown RBP16.82■□□□□ 0.28
TRAF4-216ENST00000586813 MOV10Q9HCE1 1003 aaKnown RBP16.82■□□□□ 0.28
TRAF4-216ENST00000586813 THAP1Q9NVV9 213 aa16.82■□□□□ 0.28
TRAF4-216ENST00000586813 ZNF232Q9UNY5 417 aa16.82■□□□□ 0.28
TRAF4-216ENST00000586813 A0A0G2JPF8 293 aa16.81■□□□□ 0.28
TRAF4-216ENST00000586813 HNRNPCL2B2RXH8 293 aa16.81■□□□□ 0.28
TRAF4-216ENST00000586813 HNRNPCL3B7ZW38 293 aa16.81■□□□□ 0.28
TRAF4-216ENST00000586813 HNRNPCL1O60812 293 aaKnown RBP16.81■□□□□ 0.28
TRAF4-216ENST00000586813 IGKV3-15P01624 115 aa16.81■□□□□ 0.28
TRAF4-216ENST00000586813 HNRNPCL4P0DMR1 293 aa16.81■□□□□ 0.28
TRAF4-216ENST00000586813 CALCRP30988 508 aa16.81■□□□□ 0.28
TRAF4-216ENST00000586813 PPOXP50336 477 aa16.81■□□□□ 0.28
TRAF4-216ENST00000586813 WDR4P57081 412 aaKnown RBP16.81■□□□□ 0.28
TRAF4-216ENST00000586813 FAM120AOSQ5T036 256 aa16.81■□□□□ 0.28
TRAF4-216ENST00000586813 MSANTD1Q6ZTZ1 278 aa16.81■□□□□ 0.28
TRAF4-216ENST00000586813 KDM8Q8N371 416 aa16.81■□□□□ 0.28
TRAF4-216ENST00000586813 FAM169BQ8N8A8 192 aa16.81■□□□□ 0.28
TRAF4-216ENST00000586813 SLC25A36Q96CQ1 311 aa16.81■□□□□ 0.28
TRAF4-216ENST00000586813 ITCHQ96J02 903 aa16.81■□□□□ 0.28
TRAF4-216ENST00000586813 MAELQ96JY0 434 aaKnown RBP16.81■□□□□ 0.28
TRAF4-216ENST00000586813 BPESC1Q9GZL8 116 aa16.81■□□□□ 0.28
TRAF4-216ENST00000586813 RMND5AQ9H871 391 aa16.81■□□□□ 0.28
TRAF4-216ENST00000586813 SDR39U1Q9NRG7 319 aaPredicted RBP16.81■□□□□ 0.28
TRAF4-216ENST00000586813 THUMPD1Q9NXG2 353 aaKnown RBP16.81■□□□□ 0.28
TRAF4-216ENST00000586813 RCE1Q9Y256 329 aa16.81■□□□□ 0.28
TRAF4-216ENST00000586813 ANK2Q01484 3957 aa16.8■□□□□ 0.28
TRAF4-216ENST00000586813 TMEM247A6NEH6 219 aa16.8■□□□□ 0.28
TRAF4-216ENST00000586813 ZNF432O94892 652 aa16.8■□□□□ 0.28
TRAF4-216ENST00000586813 GTF2E2P29084 291 aaKnown RBP16.8■□□□□ 0.28
TRAF4-216ENST00000586813 RPS5P46782 204 aaKnown RBP16.8■□□□□ 0.28
TRAF4-216ENST00000586813 CLDN17P56750 224 aa16.8■□□□□ 0.28
TRAF4-216ENST00000586813 EGR4Q05215 589 aa16.8■□□□□ 0.28
TRAF4-216ENST00000586813 IQCCQ4KMZ1 466 aa16.8■□□□□ 0.28
TRAF4-216ENST00000586813 ZNF311Q5JNZ3 666 aa16.8■□□□□ 0.28
TRAF4-216ENST00000586813 MYPOPQ86VE0 399 aaPredicted RBP16.8■□□□□ 0.28
TRAF4-216ENST00000586813 NUP37Q8NFH4 326 aa16.8■□□□□ 0.28
TRAF4-216ENST00000586813 OR4F15Q8NGB8 312 aa16.8■□□□□ 0.28
TRAF4-216ENST00000586813 KTI12Q96EK9 354 aaPredicted RBP16.8■□□□□ 0.28
TRAF4-216ENST00000586813 PARD6BQ9BYG5 372 aa16.8■□□□□ 0.28
TRAF4-216ENST00000586813 ZIM2Q9NZV7 527 aa16.8■□□□□ 0.28
TRAF4-216ENST00000586813 B3GAT1Q9P2W7 334 aa16.8■□□□□ 0.28
TRAF4-216ENST00000586813 SEC14L4Q9UDX3 406 aa16.8■□□□□ 0.28
TRAF4-216ENST00000586813 IFT52Q9Y366 437 aa16.8■□□□□ 0.28
TRAF4-216ENST00000586813 SLCO1B7G3V0H7 640 aa16.79■□□□□ 0.28
TRAF4-216ENST00000586813 RPL36A-HNRNPH2H7BZ11 118 aa16.79■□□□□ 0.28
TRAF4-216ENST00000586813 CELA3BP08861 270 aa16.79■□□□□ 0.28
TRAF4-216ENST00000586813 HOXB1P14653 301 aaPredicted RBP16.79■□□□□ 0.28
TRAF4-216ENST00000586813 ZNF23P17027 643 aa16.79■□□□□ 0.28
TRAF4-216ENST00000586813 ZNF43P17038 809 aa16.79■□□□□ 0.28
TRAF4-216ENST00000586813 HNF1AP20823 631 aa16.79■□□□□ 0.28
TRAF4-216ENST00000586813 ARF1P84077 181 aaKnown RBP16.79■□□□□ 0.28
TRAF4-216ENST00000586813 HOXC5Q00444 222 aa16.79■□□□□ 0.28
TRAF4-216ENST00000586813 C6orf10Q5SRN2 563 aa16.79■□□□□ 0.28
TRAF4-216ENST00000586813 ZNF540Q8NDQ6 660 aa16.79■□□□□ 0.28
TRAF4-216ENST00000586813 ANKK1Q8NFD2 765 aa16.79■□□□□ 0.28
TRAF4-216ENST00000586813 OR9I1Q8NGQ6 314 aa16.79■□□□□ 0.28
TRAF4-216ENST00000586813 SLC35B4Q969S0 331 aa16.79■□□□□ 0.28
TRAF4-216ENST00000586813 ZNF442Q9H7R0 627 aa16.79■□□□□ 0.28
TRAF4-216ENST00000586813 BCL2L10Q9HD36 194 aa16.79■□□□□ 0.28
TRAF4-216ENST00000586813 TMEM120BA0PK00 339 aa16.78■□□□□ 0.28
TRAF4-216ENST00000586813 FZD7O75084 574 aa16.78■□□□□ 0.28
TRAF4-216ENST00000586813 SLC43A1O75387 559 aa16.78■□□□□ 0.28
TRAF4-216ENST00000586813 NUDT7P0C024 238 aa16.78■□□□□ 0.28
TRAF4-216ENST00000586813 CBR1P16152 277 aa16.78■□□□□ 0.28
TRAF4-216ENST00000586813 IDH3GP51553 393 aaPredicted RBP16.78■□□□□ 0.28
TRAF4-216ENST00000586813 POLR2JP52435 117 aaKnown RBP16.78■□□□□ 0.28
TRAF4-216ENST00000586813 HGFACQ04756 655 aa16.78■□□□□ 0.28
TRAF4-216ENST00000586813 SLC9B1Q4ZJI4 515 aa16.78■□□□□ 0.28
TRAF4-216ENST00000586813 C6orf89Q6UWU4 347 aa16.78■□□□□ 0.28
TRAF4-216ENST00000586813 MAVSQ7Z434 540 aa16.78■□□□□ 0.28
TRAF4-216ENST00000586813 CROCCP2Q86T23 111 aa16.78■□□□□ 0.28
TRAF4-216ENST00000586813 MGARPQ8TDB4 240 aa16.78■□□□□ 0.28
TRAF4-216ENST00000586813 MAL2Q969L2 176 aa16.78■□□□□ 0.28
TRAF4-216ENST00000586813 OXGR1Q96P68 337 aa16.78■□□□□ 0.28
TRAF4-216ENST00000586813 C19orf24Q9BVV8 132 aa16.78■□□□□ 0.28
TRAF4-216ENST00000586813 RAB1BQ9H0U4 201 aa16.78■□□□□ 0.28
TRAF4-216ENST00000586813 A4GALTQ9NPC4 353 aa16.78■□□□□ 0.28
TRAF4-216ENST00000586813 FBXO9Q9UK97 447 aaPredicted RBP16.78■□□□□ 0.28
TRAF4-216ENST00000586813 ZNF503-AS2A6NEH8 195 aa16.77■□□□□ 0.28
TRAF4-216ENST00000586813 hCG_2039718K7EN88 272 aa16.77■□□□□ 0.28
TRAF4-216ENST00000586813 TGFAP01135 160 aa16.77■□□□□ 0.28
TRAF4-216ENST00000586813 THBS4P35443 961 aa16.77■□□□□ 0.28
TRAF4-216ENST00000586813 SRSF2Q01130 221 aaKnown RBP16.77■□□□□ 0.28
TRAF4-216ENST00000586813 RGNQ15493 299 aa16.77■□□□□ 0.28
TRAF4-216ENST00000586813 BBS10Q8TAM1 723 aa16.77■□□□□ 0.28
TRAF4-216ENST00000586813 OR52B2Q96RD2 323 aa16.77■□□□□ 0.28
TRAF4-216ENST00000586813 SOX7Q9BT81 388 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 80.1 ms