RNA–Protein interactions for RNA: ENST00000586558.5

DDX39A-204, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 1,127 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-204ENST00000586558 OR7A10O76100 309 aa17.04■□□□□ 0.32
DDX39A-204ENST00000586558 ASAH2BP0C7U1 165 aa17.04■□□□□ 0.32
DDX39A-204ENST00000586558 IFI30P13284 250 aa17.04■□□□□ 0.32
DDX39A-204ENST00000586558 ASCL1P50553 236 aa17.04■□□□□ 0.32
DDX39A-204ENST00000586558 HMGA2P52926 109 aa17.04■□□□□ 0.32
DDX39A-204ENST00000586558 FBXL19-AS1Q494R0 122 aa17.04■□□□□ 0.32
DDX39A-204ENST00000586558 OR2T5Q6IEZ7 315 aa17.04■□□□□ 0.32
DDX39A-204ENST00000586558 VWA1Q6PCB0 445 aa17.04■□□□□ 0.32
DDX39A-204ENST00000586558 BTLAQ7Z6A9 289 aa17.04■□□□□ 0.32
DDX39A-204ENST00000586558 GPAT4Q86UL3 456 aa17.04■□□□□ 0.32
DDX39A-204ENST00000586558 OR4K5Q8NGD3 323 aa17.04■□□□□ 0.32
DDX39A-204ENST00000586558 OR2T29Q8NH02 315 aa17.04■□□□□ 0.32
DDX39A-204ENST00000586558 LRRC46Q96FV0 321 aa17.04■□□□□ 0.32
DDX39A-204ENST00000586558 OXGR1Q96P68 337 aa17.04■□□□□ 0.32
DDX39A-204ENST00000586558 PLSCR4Q9NRQ2 329 aa17.04■□□□□ 0.32
DDX39A-204ENST00000586558 C20orf141Q9NUB4 165 aa17.04■□□□□ 0.32
DDX39A-204ENST00000586558 JKAMPQ9P055 326 aa17.04■□□□□ 0.32
DDX39A-204ENST00000586558 TMCC3Q9ULS5 477 aa17.04■□□□□ 0.32
DDX39A-204ENST00000586558 PROCRQ9UNN8 238 aa17.04■□□□□ 0.32
DDX39A-204ENST00000586558 FLVCR1Q9Y5Y0 555 aa17.04■□□□□ 0.32
DDX39A-204ENST00000586558 SPTAN1Q13813 2472 aaKnown RBP17.04■□□□□ 0.32
DDX39A-204ENST00000586558 SH3PXD2BA1X283 911 aa17.03■□□□□ 0.32
DDX39A-204ENST00000586558 PLPP3O14495 311 aa17.03■□□□□ 0.32
DDX39A-204ENST00000586558 PIP5K1CO60331 668 aa17.03■□□□□ 0.32
DDX39A-204ENST00000586558 CGAP01215 116 aa17.03■□□□□ 0.32
DDX39A-204ENST00000586558 CBLP22681 906 aa17.03■□□□□ 0.32
DDX39A-204ENST00000586558 PUDPQ08623 228 aa17.03■□□□□ 0.32
DDX39A-204ENST00000586558 CCNIQ14094 377 aa17.03■□□□□ 0.32
DDX39A-204ENST00000586558 CDSNQ15517 529 aa17.03■□□□□ 0.32
DDX39A-204ENST00000586558 ANKDD1AQ495B1 522 aa17.03■□□□□ 0.32
DDX39A-204ENST00000586558 NANOGNBQ7Z5D8 188 aa17.03■□□□□ 0.32
DDX39A-204ENST00000586558 STK32CQ86UX6 486 aa17.03■□□□□ 0.32
DDX39A-204ENST00000586558 LINC00471Q8N535 108 aa17.03■□□□□ 0.32
DDX39A-204ENST00000586558 OR52J3Q8NH60 311 aa17.03■□□□□ 0.32
DDX39A-204ENST00000586558 TMEM45BQ96B21 275 aa17.03■□□□□ 0.32
DDX39A-204ENST00000586558 ALPK1Q96QP1 1244 aa17.03■□□□□ 0.32
DDX39A-204ENST00000586558 REEP1Q9H902 201 aa17.03■□□□□ 0.32
DDX39A-204ENST00000586558 FANCFQ9NPI8 374 aa17.03■□□□□ 0.32
DDX39A-204ENST00000586558 PARPBPQ9NWS1 579 aa17.03■□□□□ 0.32
DDX39A-204ENST00000586558 SEC14L4Q9UDX3 406 aa17.03■□□□□ 0.32
DDX39A-204ENST00000586558 NOSIPQ9Y314 301 aaKnown RBP17.03■□□□□ 0.32
DDX39A-204ENST00000586558 NOX1Q9Y5S8 564 aa17.03■□□□□ 0.32
DDX39A-204ENST00000586558 LYVE1Q9Y5Y7 322 aa17.03■□□□□ 0.32
DDX39A-204ENST00000586558 USP9YO00507 2555 aaPredicted RBP17.03■□□□□ 0.32
DDX39A-204ENST00000586558 MED12LQ86YW9 2145 aa17.03■□□□□ 0.32
DDX39A-204ENST00000586558 MPDZO75970 2070 aa17.03■□□□□ 0.32
DDX39A-204ENST00000586558 TNFRSF11BO00300 401 aa17.02■□□□□ 0.32
DDX39A-204ENST00000586558 FKBP6O75344 327 aa17.02■□□□□ 0.32
DDX39A-204ENST00000586558 SMNDC1O75940 238 aaKnown RBP eCLIP17.02■□□□□ 0.322e-7■■■□□ 15.3
DDX39A-204ENST00000586558 OR6A2O95222 327 aa17.02■□□□□ 0.32
DDX39A-204ENST00000586558 ZNF43P17038 809 aa17.02■□□□□ 0.32
DDX39A-204ENST00000586558 FUT1P19526 365 aa17.02■□□□□ 0.32
DDX39A-204ENST00000586558 IFNGR2P38484 337 aa17.02■□□□□ 0.32
DDX39A-204ENST00000586558 LIMS1P48059 325 aa17.02■□□□□ 0.32
DDX39A-204ENST00000586558 SLC9A3P48764 834 aa17.02■□□□□ 0.32
DDX39A-204ENST00000586558 ZP4Q12836 540 aa17.02■□□□□ 0.32
DDX39A-204ENST00000586558 SEC23BQ15437 767 aa17.02■□□□□ 0.32
DDX39A-204ENST00000586558 TBPL2Q6SJ96 375 aa17.02■□□□□ 0.32
DDX39A-204ENST00000586558 TMPRSS11FQ6ZWK6 438 aa17.02■□□□□ 0.32
DDX39A-204ENST00000586558 LRRC17Q8N6Y2 441 aa17.02■□□□□ 0.32
DDX39A-204ENST00000586558 DUS3LQ96G46 650 aaKnown RBP17.02■□□□□ 0.32
DDX39A-204ENST00000586558 UCK2Q9BZX2 261 aa17.02■□□□□ 0.32
DDX39A-204ENST00000586558 B3GAT1Q9P2W7 334 aa17.02■□□□□ 0.32
DDX39A-204ENST00000586558 FOXD3Q9UJU5 478 aaPredicted RBP17.02■□□□□ 0.32
DDX39A-204ENST00000586558 FLNBO75369 2602 aaKnown RBP17.02■□□□□ 0.32
DDX39A-204ENST00000586558 SPTBN1Q01082 2364 aaKnown RBP17.02■□□□□ 0.31
DDX39A-204ENST00000586558 A8MXE2 369 aa17.01■□□□□ 0.31
DDX39A-204ENST00000586558 EFCAB9A8MZ26 197 aa17.01■□□□□ 0.31
DDX39A-204ENST00000586558 CST1P01037 141 aa17.01■□□□□ 0.31
DDX39A-204ENST00000586558 ADORA3P0DMS8 318 aa17.01■□□□□ 0.31
DDX39A-204ENST00000586558 SAGP10523 405 aaPredicted RBP17.01■□□□□ 0.31
DDX39A-204ENST00000586558 OR3A2P47893 321 aa17.01■□□□□ 0.31
DDX39A-204ENST00000586558 PCYT1AP49585 367 aa17.01■□□□□ 0.31
DDX39A-204ENST00000586558 ERFP50548 548 aa17.01■□□□□ 0.31
DDX39A-204ENST00000586558 ACTR3P61158 418 aa17.01■□□□□ 0.31
DDX39A-204ENST00000586558 LSM11P83369 360 aaKnown RBP eCLIP17.01■□□□□ 0.31
DDX39A-204ENST00000586558 IL1RL1Q01638 556 aa17.01■□□□□ 0.31
DDX39A-204ENST00000586558 C1DQ13901 141 aaKnown RBP17.01■□□□□ 0.31
DDX39A-204ENST00000586558 CREB3L2Q70SY1 520 aa17.01■□□□□ 0.31
DDX39A-204ENST00000586558 NUFIP2Q7Z417 695 aaKnown RBP17.01■□□□□ 0.31
DDX39A-204ENST00000586558 PXKQ7Z7A4 578 aa17.01■□□□□ 0.31
DDX39A-204ENST00000586558 UEVLDQ8IX04 471 aa17.01■□□□□ 0.31
DDX39A-204ENST00000586558 C10orf67Q8IYJ2 551 aa17.01■□□□□ 0.31
DDX39A-204ENST00000586558 SLCO4A1Q96BD0 722 aa17.01■□□□□ 0.31
DDX39A-204ENST00000586558 ARMC1Q9NVT9 282 aa17.01■□□□□ 0.31
DDX39A-204ENST00000586558 SAMHD1Q9Y3Z3 626 aaKnown RBP17.01■□□□□ 0.31
DDX39A-204ENST00000586558 NKX2-6A6NCS4 301 aa17■□□□□ 0.31
DDX39A-204ENST00000586558 MS4A18H0YCH9 400 aa17■□□□□ 0.31
DDX39A-204ENST00000586558 AKAP8O43823 692 aaKnown RBP17■□□□□ 0.31
DDX39A-204ENST00000586558 MRPL33O75394 65 aaKnown RBP17■□□□□ 0.31
DDX39A-204ENST00000586558 TSPAN19P0C672 248 aa17■□□□□ 0.31
DDX39A-204ENST00000586558 MAKP20794 623 aa17■□□□□ 0.31
DDX39A-204ENST00000586558 UQCRC1P31930 480 aa17■□□□□ 0.31
DDX39A-204ENST00000586558 TFF3Q07654 80 aa17■□□□□ 0.31
DDX39A-204ENST00000586558 EXOC3L2Q2M3D2 409 aa17■□□□□ 0.31
DDX39A-204ENST00000586558 MS4A18Q3C1V0 323 aa17■□□□□ 0.31
DDX39A-204ENST00000586558 TFAP2EQ6VUC0 442 aa17■□□□□ 0.31
DDX39A-204ENST00000586558 OAFQ86UD1 273 aa17■□□□□ 0.31
DDX39A-204ENST00000586558 EPHX4Q8IUS5 362 aa17■□□□□ 0.31
DDX39A-204ENST00000586558 ZNF100Q8IYN0 542 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms