RNA–Protein interactions for RNA: ENST00000585847.5

VMP1-202, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-202ENST00000585847 PPIAP62937 165 aaKnown RBP11.38□□□□□ -0.59
VMP1-202ENST00000585847 PLGLB1Q02325 96 aa11.38□□□□□ -0.59
VMP1-202ENST00000585847 CDK5R2Q13319 367 aa11.38□□□□□ -0.59
VMP1-202ENST00000585847 APOFQ13790 326 aa11.38□□□□□ -0.59
VMP1-202ENST00000585847 TOMM34Q15785 309 aaPredicted RBP11.38□□□□□ -0.59
VMP1-202ENST00000585847 SGCBQ16585 318 aa11.38□□□□□ -0.59
VMP1-202ENST00000585847 ZNF773Q6PK81 442 aa11.38□□□□□ -0.59
VMP1-202ENST00000585847 ARSKQ6UWY0 536 aa11.38□□□□□ -0.59
VMP1-202ENST00000585847 NANOGNBQ7Z5D8 188 aa11.38□□□□□ -0.59
VMP1-202ENST00000585847 FGD2Q7Z6J4 655 aa11.38□□□□□ -0.59
VMP1-202ENST00000585847 FAM109AQ8N4B1 249 aa11.38□□□□□ -0.59
VMP1-202ENST00000585847 SVOPQ8N4V2 548 aa11.38□□□□□ -0.59
VMP1-202ENST00000585847 TSPAN14Q8NG11 270 aa11.38□□□□□ -0.59
VMP1-202ENST00000585847 PFN4Q8NHR9 129 aa11.38□□□□□ -0.59
VMP1-202ENST00000585847 FCGR1BQ92637 280 aa11.38□□□□□ -0.59
VMP1-202ENST00000585847 MYDGFQ969H8 173 aa11.38□□□□□ -0.59
VMP1-202ENST00000585847 SNX18Q96RF0 628 aa11.38□□□□□ -0.59
VMP1-202ENST00000585847 SLX1AQ9BQ83 275 aa11.38□□□□□ -0.59
VMP1-202ENST00000585847 TSSK6Q9BXA6 273 aa11.38□□□□□ -0.59
VMP1-202ENST00000585847 OR2B2Q9GZK3 357 aa11.38□□□□□ -0.59
VMP1-202ENST00000585847 TSPAN10Q9H1Z9 355 aaPredicted RBP11.38□□□□□ -0.59
VMP1-202ENST00000585847 CMC2Q9NRP2 79 aa11.38□□□□□ -0.59
VMP1-202ENST00000585847 PLSCR2Q9NRY7 297 aa11.38□□□□□ -0.59
VMP1-202ENST00000585847 KLHL21Q9UJP4 597 aa11.38□□□□□ -0.59
VMP1-202ENST00000585847 RPL36Q9Y3U8 105 aaKnown RBP11.38□□□□□ -0.59
VMP1-202ENST00000585847 PCDHGB1Q9Y5G3 927 aa11.38□□□□□ -0.59
VMP1-202ENST00000585847 SNX5Q9Y5X3 404 aa11.38□□□□□ -0.59
VMP1-202ENST00000585847 RIIAD1A6NNX1 92 aa11.37□□□□□ -0.59
VMP1-202ENST00000585847 KPNA4O00629 521 aaPredicted RBP11.37□□□□□ -0.59
VMP1-202ENST00000585847 CDC42EP2O14613 210 aa11.37□□□□□ -0.59
VMP1-202ENST00000585847 ZNHIT1O43257 154 aa11.37□□□□□ -0.59
VMP1-202ENST00000585847 GMFGO60234 142 aa11.37□□□□□ -0.59
VMP1-202ENST00000585847 PTP4A3O75365 173 aa11.37□□□□□ -0.59
VMP1-202ENST00000585847 SOX14O95416 240 aa11.37□□□□□ -0.59
VMP1-202ENST00000585847 IGHG3P01860 377 aa11.37□□□□□ -0.59
VMP1-202ENST00000585847 HPNP05981 417 aa11.37□□□□□ -0.59
VMP1-202ENST00000585847 ASAH2BP0C7U1 165 aa11.37□□□□□ -0.59
VMP1-202ENST00000585847 ZNF24P17028 368 aa11.37□□□□□ -0.59
VMP1-202ENST00000585847 ZNF3P17036 446 aa11.37□□□□□ -0.59
VMP1-202ENST00000585847 GABRB1P18505 474 aa11.37□□□□□ -0.59
VMP1-202ENST00000585847 FUT1P19526 365 aa11.37□□□□□ -0.59
VMP1-202ENST00000585847 MAKP20794 623 aa11.37□□□□□ -0.59
VMP1-202ENST00000585847 IDUAP35475 653 aa11.37□□□□□ -0.59
VMP1-202ENST00000585847 POLR2IP36954 125 aaKnown RBP11.37□□□□□ -0.59
VMP1-202ENST00000585847 RPL5P46777 297 aaKnown RBP11.37□□□□□ -0.59
VMP1-202ENST00000585847 CAPZA2P47755 286 aa11.37□□□□□ -0.59
VMP1-202ENST00000585847 SNAPC1Q16533 368 aa11.37□□□□□ -0.59
VMP1-202ENST00000585847 C1orf140Q5VVS0 124 aa11.37□□□□□ -0.59
VMP1-202ENST00000585847 RNLSQ5VYX0 342 aa11.37□□□□□ -0.59
VMP1-202ENST00000585847 ADCK1Q86TW2 530 aa11.37□□□□□ -0.59
VMP1-202ENST00000585847 YRDCQ86U90 279 aaKnown RBP11.37□□□□□ -0.59
VMP1-202ENST00000585847 SLC22A16Q86VW1 577 aa11.37□□□□□ -0.59
VMP1-202ENST00000585847 FAM83FQ8NEG4 500 aaPredicted RBP11.37□□□□□ -0.59
VMP1-202ENST00000585847 TMEM163Q8TC26 289 aa11.37□□□□□ -0.59
VMP1-202ENST00000585847 POC1BQ8TC44 478 aa11.37□□□□□ -0.59
VMP1-202ENST00000585847 GPA33Q99795 319 aa11.37□□□□□ -0.59
VMP1-202ENST00000585847 TAPBPLQ9BX59 468 aa11.37□□□□□ -0.59
VMP1-202ENST00000585847 DEFB127Q9H1M4 99 aa11.37□□□□□ -0.59
VMP1-202ENST00000585847 DUSP21Q9H596 190 aa11.37□□□□□ -0.59
VMP1-202ENST00000585847 ACKR4Q9NPB9 350 aa11.37□□□□□ -0.59
VMP1-202ENST00000585847 FANCFQ9NPI8 374 aa11.37□□□□□ -0.59
VMP1-202ENST00000585847 C20orf141Q9NUB4 165 aa11.37□□□□□ -0.59
VMP1-202ENST00000585847 ALKBH4Q9NXW9 302 aa11.37□□□□□ -0.59
VMP1-202ENST00000585847 MRPL39Q9NYK5 338 aaKnown RBP11.37□□□□□ -0.59
VMP1-202ENST00000585847 DKKL1Q9UK85 242 aa11.37□□□□□ -0.59
VMP1-202ENST00000585847 RNF6Q9Y252 685 aa11.37□□□□□ -0.59
VMP1-202ENST00000585847 TRAPPC4Q9Y296 219 aa11.37□□□□□ -0.59
VMP1-202ENST00000585847 B3GALT5Q9Y2C3 310 aa11.37□□□□□ -0.59
VMP1-202ENST00000585847 SMIM31A0A1B0GVY4 71 aa11.36□□□□□ -0.59
VMP1-202ENST00000585847 TTLL8A6PVC2 850 aa11.36□□□□□ -0.59
VMP1-202ENST00000585847 CLCA1A8K7I4 914 aa11.36□□□□□ -0.59
VMP1-202ENST00000585847 SHISA8B8ZZ34 492 aa11.36□□□□□ -0.59
VMP1-202ENST00000585847 NPIPA5E9PKD4 350 aa11.36□□□□□ -0.59
VMP1-202ENST00000585847 ACOT7O00154 380 aa11.36□□□□□ -0.59
VMP1-202ENST00000585847 BHLHE40O14503 412 aa11.36□□□□□ -0.59
VMP1-202ENST00000585847 PRODHO43272 600 aa11.36□□□□□ -0.59
VMP1-202ENST00000585847 AHCYL1O43865 530 aa11.36□□□□□ -0.59
VMP1-202ENST00000585847 PIP5K1CO60331 668 aa11.36□□□□□ -0.59
VMP1-202ENST00000585847 EIF1BO60739 113 aaKnown RBP11.36□□□□□ -0.59
VMP1-202ENST00000585847 CLIC3O95833 236 aa11.36□□□□□ -0.59
VMP1-202ENST00000585847 TXNDC12O95881 172 aa11.36□□□□□ -0.59
VMP1-202ENST00000585847 CRYABP02511 175 aaKnown RBP11.36□□□□□ -0.59
VMP1-202ENST00000585847 NR2C1P13056 603 aa11.36□□□□□ -0.59
VMP1-202ENST00000585847 HK1P19367 917 aa11.36□□□□□ -0.59
VMP1-202ENST00000585847 DPP4P27487 766 aa11.36□□□□□ -0.59
VMP1-202ENST00000585847 GDF1P27539 372 aa11.36□□□□□ -0.59
VMP1-202ENST00000585847 EFNB1P98172 346 aa11.36□□□□□ -0.59
VMP1-202ENST00000585847 FOXF1Q12946 379 aa11.36□□□□□ -0.59
VMP1-202ENST00000585847 ZNF239Q16600 458 aaKnown RBP11.36□□□□□ -0.59
VMP1-202ENST00000585847 SYT14P1Q58G82 188 aa11.36□□□□□ -0.59
VMP1-202ENST00000585847 NXNL2Q5VZ03 156 aa11.36□□□□□ -0.59
VMP1-202ENST00000585847 ANKRD34AQ69YU3 496 aa11.36□□□□□ -0.59
VMP1-202ENST00000585847 TMEM154Q6P9G4 183 aa11.36□□□□□ -0.59
VMP1-202ENST00000585847 FAM180AQ6UWF9 173 aa11.36□□□□□ -0.59
VMP1-202ENST00000585847 TRILQ7L0X0 811 aa11.36□□□□□ -0.59
VMP1-202ENST00000585847 PRSS48Q7RTY5 328 aa11.36□□□□□ -0.59
VMP1-202ENST00000585847 SLC46A3Q7Z3Q1 461 aa11.36□□□□□ -0.59
VMP1-202ENST00000585847 ADGRG3Q86Y34 549 aa11.36□□□□□ -0.59
VMP1-202ENST00000585847 KIF18BQ86Y91 864 aa11.36□□□□□ -0.59
VMP1-202ENST00000585847 CCDC71Q8IV32 467 aaPredicted RBP11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms