RNA–Protein interactions for RNA: ENST00000582792.5

SS18-222, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 531 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-222ENST00000582792 FUT5Q11128 374 aa11.81□□□□□ -0.52
SS18-222ENST00000582792 HIKESHIQ53FT3 197 aa11.81□□□□□ -0.52
SS18-222ENST00000582792 ATAD3BQ5T9A4 648 aa11.81□□□□□ -0.52
SS18-222ENST00000582792 PAQR6Q6TCH4 344 aa11.81□□□□□ -0.52
SS18-222ENST00000582792 FRRS1Q6ZNA5 592 aa11.81□□□□□ -0.52
SS18-222ENST00000582792 SLC46A3Q7Z3Q1 461 aa11.81□□□□□ -0.52
SS18-222ENST00000582792 DHDDSQ86SQ9 333 aa11.81□□□□□ -0.52
SS18-222ENST00000582792 RETREG3Q86VR2 466 aa11.81□□□□□ -0.52
SS18-222ENST00000582792 RNF130Q86XS8 419 aa11.81□□□□□ -0.52
SS18-222ENST00000582792 MSRB3Q8IXL7 192 aa11.81□□□□□ -0.52
SS18-222ENST00000582792 CCDC197Q8NCU1 140 aa11.81□□□□□ -0.52
SS18-222ENST00000582792 XAGE5Q8WWM1 108 aa11.81□□□□□ -0.52
SS18-222ENST00000582792 TMEM45BQ96B21 275 aa11.81□□□□□ -0.52
SS18-222ENST00000582792 DDIT4LQ96D03 193 aa11.81□□□□□ -0.52
SS18-222ENST00000582792 ZG16BQ96DA0 208 aa11.81□□□□□ -0.52
SS18-222ENST00000582792 CMTM5Q96DZ9 223 aa11.81□□□□□ -0.52
SS18-222ENST00000582792 VRK1Q99986 396 aaPredicted RBP11.81□□□□□ -0.52
SS18-222ENST00000582792 OBP2BQ9NPH6 170 aa11.81□□□□□ -0.52
SS18-222ENST00000582792 CA10Q9NS85 328 aa11.81□□□□□ -0.52
SS18-222ENST00000582792 SLC6A13Q9NSD5 602 aa11.81□□□□□ -0.52
SS18-222ENST00000582792 TMED7Q9Y3B3 224 aa11.81□□□□□ -0.52
SS18-222ENST00000582792 TMEM72A0PK05 275 aa11.8□□□□□ -0.52
SS18-222ENST00000582792 CLDN24A6NM45 220 aa11.8□□□□□ -0.52
SS18-222ENST00000582792 B9A039 149 aa11.8□□□□□ -0.52
SS18-222ENST00000582792 FBP2O00757 339 aa11.8□□□□□ -0.52
SS18-222ENST00000582792 COX4I1P13073 169 aa11.8□□□□□ -0.52
SS18-222ENST00000582792 CDH2P19022 906 aaPredicted RBP11.8□□□□□ -0.52
SS18-222ENST00000582792 PPOXP50336 477 aa11.8□□□□□ -0.52
SS18-222ENST00000582792 POLR2HP52434 150 aaKnown RBP11.8□□□□□ -0.52
SS18-222ENST00000582792 KCNJ10P78508 379 aa11.8□□□□□ -0.52
SS18-222ENST00000582792 EFNB3Q15768 340 aa11.8□□□□□ -0.52
SS18-222ENST00000582792 TRMT5Q32P41 509 aaKnown RBP11.8□□□□□ -0.52
SS18-222ENST00000582792 MMEL1Q495T6 779 aa11.8□□□□□ -0.52
SS18-222ENST00000582792 GTDC1Q4AE62 458 aa11.8□□□□□ -0.52
SS18-222ENST00000582792 RUNDC3AQ59EK9 446 aa11.8□□□□□ -0.52
SS18-222ENST00000582792 SNX32Q86XE0 403 aa11.8□□□□□ -0.52
SS18-222ENST00000582792 MEX3DQ86XN8 651 aaKnown RBP11.8□□□□□ -0.52
SS18-222ENST00000582792 ZIC4Q8N9L1 334 aa11.8□□□□□ -0.52
SS18-222ENST00000582792 POMGNT2Q8NAT1 580 aa11.8□□□□□ -0.52
SS18-222ENST00000582792 RAB8BQ92930 207 aa11.8□□□□□ -0.52
SS18-222ENST00000582792 ROPN1LQ96C74 230 aa11.8□□□□□ -0.52
SS18-222ENST00000582792 C1orf159Q96HA4 380 aa11.8□□□□□ -0.52
SS18-222ENST00000582792 TRNT1Q96Q11 434 aaKnown RBP11.8□□□□□ -0.52
SS18-222ENST00000582792 SLC38A2Q96QD8 506 aa11.8□□□□□ -0.52
SS18-222ENST00000582792 LRRC37BQ96QE4 947 aa11.8□□□□□ -0.52
SS18-222ENST00000582792 CGREF1Q99674 301 aa11.8□□□□□ -0.52
SS18-222ENST00000582792 KCNS3Q9BQ31 491 aa11.8□□□□□ -0.52
SS18-222ENST00000582792 KATNB1Q9BVA0 655 aa11.8□□□□□ -0.52
SS18-222ENST00000582792 PLK3Q9H4B4 646 aa11.8□□□□□ -0.52
SS18-222ENST00000582792 ST6GALNAC1Q9NSC7 600 aaPredicted RBP11.8□□□□□ -0.52
SS18-222ENST00000582792 GID8Q9NWU2 228 aa11.8□□□□□ -0.52
SS18-222ENST00000582792 SLC25A37Q9NYZ2 338 aa11.8□□□□□ -0.52
SS18-222ENST00000582792 VAPAQ9P0L0 249 aa11.8□□□□□ -0.52
SS18-222ENST00000582792 SLAMF8Q9P0V8 285 aa11.8□□□□□ -0.52
SS18-222ENST00000582792 ARMCX1Q9P291 453 aa11.8□□□□□ -0.52
SS18-222ENST00000582792 OSGIN1Q9UJX0 560 aa11.8□□□□□ -0.52
SS18-222ENST00000582792 LRP5LA4QPB2 252 aa11.79□□□□□ -0.52
SS18-222ENST00000582792 EVPLLA8MZ36 301 aa11.79□□□□□ -0.52
SS18-222ENST00000582792 HMGN4O00479 90 aa11.79□□□□□ -0.52
SS18-222ENST00000582792 AP3D1O14617 1153 aa11.79□□□□□ -0.52
SS18-222ENST00000582792 MRASO14807 208 aa11.79□□□□□ -0.52
SS18-222ENST00000582792 STAMBPO95630 424 aa11.79□□□□□ -0.52
SS18-222ENST00000582792 CRYAAP02489 173 aa11.79□□□□□ -0.52
SS18-222ENST00000582792 GPX2P18283 190 aa11.79□□□□□ -0.52
SS18-222ENST00000582792 PAX7P23759 505 aa11.79□□□□□ -0.52
SS18-222ENST00000582792 GIFP27352 417 aa11.79□□□□□ -0.52
SS18-222ENST00000582792 MAP2K6P52564 334 aa11.79□□□□□ -0.52
SS18-222ENST00000582792 NFYCQ13952 458 aa11.79□□□□□ -0.52
SS18-222ENST00000582792 RGNQ15493 299 aa11.79□□□□□ -0.52
SS18-222ENST00000582792 ADIPOQQ15848 244 aa11.79□□□□□ -0.52
SS18-222ENST00000582792 ZSWIM7Q19AV6 140 aa11.79□□□□□ -0.52
SS18-222ENST00000582792 TBRG1Q3YBR2 411 aa11.79□□□□□ -0.52
SS18-222ENST00000582792 OTUD3Q5T2D3 398 aaPredicted RBP11.79□□□□□ -0.52
SS18-222ENST00000582792 PRAMEF8Q5VWM4 474 aa11.79□□□□□ -0.52
SS18-222ENST00000582792 PRAMEF7Q5VXH5 474 aa11.79□□□□□ -0.52
SS18-222ENST00000582792 REP15Q6BDI9 236 aa11.79□□□□□ -0.52
SS18-222ENST00000582792 TNFAIP8L2Q6P589 184 aaPredicted RBP11.79□□□□□ -0.52
SS18-222ENST00000582792 HACD2Q6Y1H2 254 aa11.79□□□□□ -0.52
SS18-222ENST00000582792 LRRC74BQ6ZQY2 392 aa11.79□□□□□ -0.52
SS18-222ENST00000582792 AAED1Q7RTV5 226 aa11.79□□□□□ -0.52
SS18-222ENST00000582792 ABHD12BQ7Z5M8 362 aaPredicted RBP11.79□□□□□ -0.52
SS18-222ENST00000582792 HMGN2P46Q86SG4 172 aa11.79□□□□□ -0.52
SS18-222ENST00000582792 LSRQ86X29 649 aaPredicted RBP11.79□□□□□ -0.52
SS18-222ENST00000582792 TREML1Q86YW5 311 aa11.79□□□□□ -0.52
SS18-222ENST00000582792 CNOT9Q92600 299 aaKnown RBP11.79□□□□□ -0.52
SS18-222ENST00000582792 ANKRD27Q96NW4 1050 aa11.79□□□□□ -0.52
SS18-222ENST00000582792 ZNF385AQ96PM9 386 aaKnown RBP11.79□□□□□ -0.52
SS18-222ENST00000582792 SH3GL1Q99961 368 aa11.79□□□□□ -0.52
SS18-222ENST00000582792 CPPED1Q9BRF8 314 aaPredicted RBP11.79□□□□□ -0.52
SS18-222ENST00000582792 SF3B5Q9BWJ5 86 aaKnown RBP11.79□□□□□ -0.52
SS18-222ENST00000582792 CALML5Q9NZT1 146 aa11.79□□□□□ -0.52
SS18-222ENST00000582792 AP3M1Q9Y2T2 418 aa11.79□□□□□ -0.52
SS18-222ENST00000582792 LOC100653049A0A140TA62 436 aa11.78□□□□□ -0.52
SS18-222ENST00000582792 ZC3H12DA2A288 527 aaKnown RBP11.78□□□□□ -0.52
SS18-222ENST00000582792 FAAHO00519 579 aa11.78□□□□□ -0.52
SS18-222ENST00000582792 NDUFAB1O14561 156 aa11.78□□□□□ -0.52
SS18-222ENST00000582792 KRT34O76011 436 aa11.78□□□□□ -0.52
SS18-222ENST00000582792 TACSTD2P09758 323 aa11.78□□□□□ -0.52
SS18-222ENST00000582792 OR4A8P0C604 315 aa11.78□□□□□ -0.52
SS18-222ENST00000582792 ITGA2P17301 1181 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms