RNA–Protein interactions for RNA: ENST00000582230.5

TOP3A-213, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 4

Gene TOP3A, Length 588 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-213ENST00000582230 OR9K2Q8NGE7 335 aa17.83■□□□□ 0.44
TOP3A-213ENST00000582230 LRRC46Q96FV0 321 aa17.83■□□□□ 0.44
TOP3A-213ENST00000582230 JKAMPQ9P055 326 aa17.83■□□□□ 0.44
TOP3A-213ENST00000582230 PROCRQ9UNN8 238 aa17.83■□□□□ 0.44
TOP3A-213ENST00000582230 FLVCR1Q9Y5Y0 555 aa17.83■□□□□ 0.44
TOP3A-213ENST00000582230 MYO7BQ6PIF6 2116 aa17.83■□□□□ 0.44
TOP3A-213ENST00000582230 ARHGAP21Q5T5U3 1957 aa17.82■□□□□ 0.44
TOP3A-213ENST00000582230 MYO18BQ8IUG5 2567 aa17.82■□□□□ 0.44
TOP3A-213ENST00000582230 FAM90A27PA6NNH2 459 aa17.82■□□□□ 0.44
TOP3A-213ENST00000582230 MS4A18H0YCH9 400 aa17.82■□□□□ 0.44
TOP3A-213ENST00000582230 TNFRSF11BO00300 401 aa17.82■□□□□ 0.44
TOP3A-213ENST00000582230 MSTNO14793 375 aa17.82■□□□□ 0.44
TOP3A-213ENST00000582230 PIP5K1CO60331 668 aa17.82■□□□□ 0.44
TOP3A-213ENST00000582230 FKBP6O75344 327 aa17.82■□□□□ 0.44
TOP3A-213ENST00000582230 OR6A2O95222 327 aa17.82■□□□□ 0.44
TOP3A-213ENST00000582230 CST1P01037 141 aa17.82■□□□□ 0.44
TOP3A-213ENST00000582230 CGAP01215 116 aa17.82■□□□□ 0.44
TOP3A-213ENST00000582230 ACTR3P61158 418 aa17.82■□□□□ 0.44
TOP3A-213ENST00000582230 LSM11P83369 360 aaKnown RBP eCLIP17.82■□□□□ 0.44
TOP3A-213ENST00000582230 PUDPQ08623 228 aa17.82■□□□□ 0.44
TOP3A-213ENST00000582230 CCNIQ14094 377 aa17.82■□□□□ 0.44
TOP3A-213ENST00000582230 CDSNQ15517 529 aa17.82■□□□□ 0.44
TOP3A-213ENST00000582230 MS4A18Q3C1V0 323 aa17.82■□□□□ 0.44
TOP3A-213ENST00000582230 TMPRSS11FQ6ZWK6 438 aa17.82■□□□□ 0.44
TOP3A-213ENST00000582230 STK32CQ86UX6 486 aa17.82■□□□□ 0.44
TOP3A-213ENST00000582230 C10orf67Q8IYJ2 551 aa17.82■□□□□ 0.44
TOP3A-213ENST00000582230 LINC00471Q8N535 108 aa17.82■□□□□ 0.44
TOP3A-213ENST00000582230 LRRC17Q8N6Y2 441 aa17.82■□□□□ 0.44
TOP3A-213ENST00000582230 DUS3LQ96G46 650 aaKnown RBP17.82■□□□□ 0.44
TOP3A-213ENST00000582230 UCK2Q9BZX2 261 aa17.82■□□□□ 0.44
TOP3A-213ENST00000582230 REEP1Q9H902 201 aa17.82■□□□□ 0.44
TOP3A-213ENST00000582230 FANCFQ9NPI8 374 aa17.82■□□□□ 0.44
TOP3A-213ENST00000582230 PARPBPQ9NWS1 579 aa17.82■□□□□ 0.44
TOP3A-213ENST00000582230 SEC14L4Q9UDX3 406 aa17.82■□□□□ 0.44
TOP3A-213ENST00000582230 NOSIPQ9Y314 301 aaKnown RBP17.82■□□□□ 0.44
TOP3A-213ENST00000582230 KLF2Q9Y5W3 355 aaPredicted RBP17.82■□□□□ 0.44
TOP3A-213ENST00000582230 LYVE1Q9Y5Y7 322 aa17.82■□□□□ 0.44
TOP3A-213ENST00000582230 FASNP49327 2511 aaKnown RBP17.82■□□□□ 0.44
TOP3A-213ENST00000582230 EEF1E1-BLOC1S5C9J1V9 151 aa17.81■□□□□ 0.44
TOP3A-213ENST00000582230 EEF1E1O43324 174 aaKnown RBP17.81■□□□□ 0.44
TOP3A-213ENST00000582230 SMNDC1O75940 238 aaKnown RBP eCLIP17.81■□□□□ 0.44
TOP3A-213ENST00000582230 ZNF43P17038 809 aa17.81■□□□□ 0.44
TOP3A-213ENST00000582230 IFNGR2P38484 337 aa17.81■□□□□ 0.44
TOP3A-213ENST00000582230 LIMS1P48059 325 aa17.81■□□□□ 0.44
TOP3A-213ENST00000582230 ERFP50548 548 aa17.81■□□□□ 0.44
TOP3A-213ENST00000582230 ASCL1P50553 236 aa17.81■□□□□ 0.44
TOP3A-213ENST00000582230 IL1RL1Q01638 556 aa17.81■□□□□ 0.44
TOP3A-213ENST00000582230 ZP4Q12836 540 aa17.81■□□□□ 0.44
TOP3A-213ENST00000582230 C1DQ13901 141 aaKnown RBP17.81■□□□□ 0.44
TOP3A-213ENST00000582230 SEC23BQ15437 767 aa17.81■□□□□ 0.44
TOP3A-213ENST00000582230 FBXL19-AS1Q494R0 122 aa17.81■□□□□ 0.44
TOP3A-213ENST00000582230 ANKDD1AQ495B1 522 aa17.81■□□□□ 0.44
TOP3A-213ENST00000582230 CREB3L2Q70SY1 520 aa17.81■□□□□ 0.44
TOP3A-213ENST00000582230 NUFIP2Q7Z417 695 aaKnown RBP17.81■□□□□ 0.44
TOP3A-213ENST00000582230 NANOGNBQ7Z5D8 188 aa17.81■□□□□ 0.44
TOP3A-213ENST00000582230 TMEM45BQ96B21 275 aa17.81■□□□□ 0.44
TOP3A-213ENST00000582230 SLCO4A1Q96BD0 722 aa17.81■□□□□ 0.44
TOP3A-213ENST00000582230 ZNF775Q96BV0 537 aaPredicted RBP17.81■□□□□ 0.44
TOP3A-213ENST00000582230 B3GAT1Q9P2W7 334 aa17.81■□□□□ 0.44
TOP3A-213ENST00000582230 SAMHD1Q9Y3Z3 626 aaKnown RBP17.81■□□□□ 0.44
TOP3A-213ENST00000582230 NOX1Q9Y5S8 564 aa17.81■□□□□ 0.44
TOP3A-213ENST00000582230 NCOA6Q14686 2063 aaPredicted RBP17.81■□□□□ 0.44
TOP3A-213ENST00000582230 A8MXE2 369 aa17.8■□□□□ 0.44
TOP3A-213ENST00000582230 EFCAB9A8MZ26 197 aa17.8■□□□□ 0.44
TOP3A-213ENST00000582230 GNGT2O14610 69 aa17.8■□□□□ 0.44
TOP3A-213ENST00000582230 MRPL33O75394 65 aaKnown RBP17.8■□□□□ 0.44
TOP3A-213ENST00000582230 ADORA3P0DMS8 318 aa17.8■□□□□ 0.44
TOP3A-213ENST00000582230 SAGP10523 405 aaPredicted RBP17.8■□□□□ 0.44
TOP3A-213ENST00000582230 MAKP20794 623 aa17.8■□□□□ 0.44
TOP3A-213ENST00000582230 AHCYP23526 432 aa17.8■□□□□ 0.44
TOP3A-213ENST00000582230 SLC9A3P48764 834 aa17.8■□□□□ 0.44
TOP3A-213ENST00000582230 EXOC3L2Q2M3D2 409 aa17.8■□□□□ 0.44
TOP3A-213ENST00000582230 PXKQ7Z7A4 578 aa17.8■□□□□ 0.44
TOP3A-213ENST00000582230 UEVLDQ8IX04 471 aa17.8■□□□□ 0.44
TOP3A-213ENST00000582230 KDM8Q8N371 416 aa17.8■□□□□ 0.44
TOP3A-213ENST00000582230 ZIC4Q8N9L1 334 aa17.8■□□□□ 0.44
TOP3A-213ENST00000582230 OR4C15Q8NGM1 316 aa17.8■□□□□ 0.44
TOP3A-213ENST00000582230 C12orf49Q9H741 205 aa17.8■□□□□ 0.44
TOP3A-213ENST00000582230 ARMC1Q9NVT9 282 aa17.8■□□□□ 0.44
TOP3A-213ENST00000582230 TAS2R5Q9NYW4 299 aa17.8■□□□□ 0.44
TOP3A-213ENST00000582230 FOXD3Q9UJU5 478 aaPredicted RBP17.8■□□□□ 0.44
TOP3A-213ENST00000582230 AP4S1Q9Y587 144 aa17.8■□□□□ 0.44
TOP3A-213ENST00000582230 NKX2-6A6NCS4 301 aa17.79■□□□□ 0.44
TOP3A-213ENST00000582230 BLOC1S5-TXNDC5H3BN57 136 aa17.79■□□□□ 0.44
TOP3A-213ENST00000582230 OR10H3O60404 316 aa17.79■□□□□ 0.44
TOP3A-213ENST00000582230 HPRP00739 348 aa17.79■□□□□ 0.44
TOP3A-213ENST00000582230 TSPAN19P0C672 248 aa17.79■□□□□ 0.44
TOP3A-213ENST00000582230 OMPP47874 163 aa17.79■□□□□ 0.44
TOP3A-213ENST00000582230 OR3A2P47893 321 aa17.79■□□□□ 0.44
TOP3A-213ENST00000582230 KPNB1Q14974 876 aaKnown RBP17.79■□□□□ 0.44
TOP3A-213ENST00000582230 LUZP2Q86TE4 346 aa17.79■□□□□ 0.44
TOP3A-213ENST00000582230 OAFQ86UD1 273 aa17.79■□□□□ 0.44
TOP3A-213ENST00000582230 EPHX4Q8IUS5 362 aa17.79■□□□□ 0.44
TOP3A-213ENST00000582230 ZNF100Q8IYN0 542 aa17.79■□□□□ 0.44
TOP3A-213ENST00000582230 ZNF610Q8N9Z0 462 aa17.79■□□□□ 0.44
TOP3A-213ENST00000582230 ANKK1Q8NFD2 765 aa17.79■□□□□ 0.44
TOP3A-213ENST00000582230 DNAJB9Q9UBS3 223 aa17.79■□□□□ 0.44
TOP3A-213ENST00000582230 DOCK7Q96N67 2140 aa17.78■□□□□ 0.44
TOP3A-213ENST00000582230 HNRNPRO43390 633 aaKnown RBP17.78■□□□□ 0.44
TOP3A-213ENST00000582230 RNF13O43567 381 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms