RNA–Protein interactions for RNA: ENST00000582092.1

SS18-220, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 1 (best)

Gene SS18, Length 215 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-220ENST00000582092 AKAP8O43823 692 aaKnown RBP8.42□□□□□ -1.06
SS18-220ENST00000582092 KLF7O75840 302 aaPredicted RBP8.42□□□□□ -1.06
SS18-220ENST00000582092 CLPXO76031 633 aa8.42□□□□□ -1.06
SS18-220ENST00000582092 NADKO95544 446 aaPredicted RBP8.42□□□□□ -1.06
SS18-220ENST00000582092 P04436 131 aa8.42□□□□□ -1.06
SS18-220ENST00000582092 COX6A1P12074 109 aa8.42□□□□□ -1.06
SS18-220ENST00000582092 HIST1H1CP16403 213 aaKnown RBP8.42□□□□□ -1.06
SS18-220ENST00000582092 ZNF182P17025 639 aaPredicted RBP8.42□□□□□ -1.06
SS18-220ENST00000582092 GADD45AP24522 165 aa8.42□□□□□ -1.06
SS18-220ENST00000582092 FKBP2P26885 142 aaKnown RBP8.42□□□□□ -1.06
SS18-220ENST00000582092 PCSK6P29122 969 aa8.42□□□□□ -1.06
SS18-220ENST00000582092 LIPAP38571 399 aa8.42□□□□□ -1.06
SS18-220ENST00000582092 SOX3P41225 446 aa8.42□□□□□ -1.06
SS18-220ENST00000582092 CENPAP49450 140 aa8.42□□□□□ -1.06
SS18-220ENST00000582092 ETV1P50549 477 aa8.42□□□□□ -1.06
SS18-220ENST00000582092 SNTA1Q13424 505 aa8.42□□□□□ -1.06
SS18-220ENST00000582092 DNASE1L3Q13609 305 aa8.42□□□□□ -1.06
SS18-220ENST00000582092 CRMP1Q14194 572 aa8.42□□□□□ -1.06
SS18-220ENST00000582092 TOMM34Q15785 309 aaPredicted RBP8.42□□□□□ -1.06
SS18-220ENST00000582092 NTRK2Q16620 822 aa8.42□□□□□ -1.06
SS18-220ENST00000582092 EMC4Q5J8M3 183 aa8.42□□□□□ -1.06
SS18-220ENST00000582092 SLC35D3Q5M8T2 416 aa8.42□□□□□ -1.06
SS18-220ENST00000582092 FAM69AQ5T7M9 428 aa8.42□□□□□ -1.06
SS18-220ENST00000582092 C1orf140Q5VVS0 124 aa8.42□□□□□ -1.06
SS18-220ENST00000582092 NIPAL3Q6P499 406 aa8.42□□□□□ -1.06
SS18-220ENST00000582092 LEG1Q6P5S2 330 aa8.42□□□□□ -1.06
SS18-220ENST00000582092 GDPGP1Q6ZNW5 385 aa8.42□□□□□ -1.06
SS18-220ENST00000582092 SHFQ7M4L6 423 aa8.42□□□□□ -1.06
SS18-220ENST00000582092 POMGNT2Q8NAT1 580 aa8.42□□□□□ -1.06
SS18-220ENST00000582092 CYB561A3Q8NBI2 242 aa8.42□□□□□ -1.06
SS18-220ENST00000582092 SDR9C7Q8NEX9 313 aa8.42□□□□□ -1.06
SS18-220ENST00000582092 OR4F15Q8NGB8 312 aa8.42□□□□□ -1.06
SS18-220ENST00000582092 OR11G2Q8NGC1 345 aa8.42□□□□□ -1.06
SS18-220ENST00000582092 OR10G3Q8NGC4 313 aa8.42□□□□□ -1.06
SS18-220ENST00000582092 OR5J2Q8NH18 312 aa8.42□□□□□ -1.06
SS18-220ENST00000582092 MOSPD2Q8NHP6 518 aa8.42□□□□□ -1.06
SS18-220ENST00000582092 LIPHQ8WWY8 451 aa8.42□□□□□ -1.06
SS18-220ENST00000582092 TAAR8Q969N4 342 aa8.42□□□□□ -1.06
SS18-220ENST00000582092 KTI12Q96EK9 354 aaPredicted RBP8.42□□□□□ -1.06
SS18-220ENST00000582092 C1GALT1C1Q96EU7 318 aa8.42□□□□□ -1.06
SS18-220ENST00000582092 IMMP1LQ96LU5 166 aa8.42□□□□□ -1.06
SS18-220ENST00000582092 JSRP1Q96MG2 331 aaPredicted RBP8.42□□□□□ -1.06
SS18-220ENST00000582092 C5orf34Q96MH7 638 aa8.42□□□□□ -1.06
SS18-220ENST00000582092 IP6K3Q96PC2 410 aa8.42□□□□□ -1.06
SS18-220ENST00000582092 TEAD3Q99594 435 aa8.42□□□□□ -1.06
SS18-220ENST00000582092 ENKD1Q9H0I2 346 aa8.42□□□□□ -1.06
SS18-220ENST00000582092 DCSTAMPQ9H295 470 aa8.42□□□□□ -1.06
SS18-220ENST00000582092 INIPQ9NRY2 104 aa8.42□□□□□ -1.06
SS18-220ENST00000582092 TAS2R16Q9NYV7 291 aa8.42□□□□□ -1.06
SS18-220ENST00000582092 CHRNA9Q9UGM1 479 aa8.42□□□□□ -1.06
SS18-220ENST00000582092 STUB1Q9UNE7 303 aa8.42□□□□□ -1.06
SS18-220ENST00000582092 VDAC3Q9Y277 283 aa8.42□□□□□ -1.06
SS18-220ENST00000582092 CAB39Q9Y376 341 aaPredicted RBP8.42□□□□□ -1.06
SS18-220ENST00000582092 WIF1Q9Y5W5 379 aa8.42□□□□□ -1.06
SS18-220ENST00000582092 HS3ST3B1Q9Y662 390 aa8.42□□□□□ -1.06
SS18-220ENST00000582092 ASPMQ8IZT6 3477 aa8.41□□□□□ -1.06
SS18-220ENST00000582092 LOC101059948A0A1B0GTJ6 334 aa8.41□□□□□ -1.06
SS18-220ENST00000582092 LRRN3E7EW58 273 aa8.41□□□□□ -1.06
SS18-220ENST00000582092 MT-ND5P03915 603 aa8.41□□□□□ -1.06
SS18-220ENST00000582092 F13BP05160 661 aa8.41□□□□□ -1.06
SS18-220ENST00000582092 MRPL3P09001 348 aaKnown RBP8.41□□□□□ -1.06
SS18-220ENST00000582092 APEHP13798 732 aaKnown RBP8.41□□□□□ -1.06
SS18-220ENST00000582092 SDHAP31040 664 aa8.41□□□□□ -1.06
SS18-220ENST00000582092 S100A5P33763 92 aa8.41□□□□□ -1.06
SS18-220ENST00000582092 UGT2B10P36537 528 aa8.41□□□□□ -1.06
SS18-220ENST00000582092 CASRP41180 1078 aa8.41□□□□□ -1.06
SS18-220ENST00000582092 EIF1P41567 113 aaKnown RBP8.41□□□□□ -1.06
SS18-220ENST00000582092 CASP3P42574 277 aa8.41□□□□□ -1.06
SS18-220ENST00000582092 FXYD6P3P58550 94 aa8.41□□□□□ -1.06
SS18-220ENST00000582092 TAS2R43P59537 309 aa8.41□□□□□ -1.06
SS18-220ENST00000582092 RPL18Q07020 188 aaKnown RBP8.41□□□□□ -1.06
SS18-220ENST00000582092 CDC20Q12834 499 aa8.41□□□□□ -1.06
SS18-220ENST00000582092 SRSF6Q13247 344 aaKnown RBP8.41□□□□□ -1.06
SS18-220ENST00000582092 SPCS2Q15005 226 aa8.41□□□□□ -1.06
SS18-220ENST00000582092 TOMM20Q15388 145 aa8.41□□□□□ -1.06
SS18-220ENST00000582092 CTF1Q16619 201 aa8.41□□□□□ -1.06
SS18-220ENST00000582092 ZNF517Q6ZMY9 492 aaPredicted RBP8.41□□□□□ -1.06
SS18-220ENST00000582092 SLC16A12Q6ZSM3 486 aa8.41□□□□□ -1.06
SS18-220ENST00000582092 TIPARPQ7Z3E1 657 aaKnown RBP8.41□□□□□ -1.06
SS18-220ENST00000582092 ADGRG3Q86Y34 549 aa8.41□□□□□ -1.06
SS18-220ENST00000582092 GPALPP1Q8IXQ4 340 aa8.41□□□□□ -1.06
SS18-220ENST00000582092 BBS1Q8NFJ9 593 aa8.41□□□□□ -1.06
SS18-220ENST00000582092 OR6K6Q8NGW6 343 aa8.41□□□□□ -1.06
SS18-220ENST00000582092 OR6S1Q8NH40 331 aa8.41□□□□□ -1.06
SS18-220ENST00000582092 OR52N1Q8NH53 320 aa8.41□□□□□ -1.06
SS18-220ENST00000582092 S100ZQ8WXG8 99 aa8.41□□□□□ -1.06
SS18-220ENST00000582092 SMPDL3BQ92485 455 aa8.41□□□□□ -1.06
SS18-220ENST00000582092 EXTL1Q92935 676 aa8.41□□□□□ -1.06
SS18-220ENST00000582092 MRGPRX4Q96LA9 322 aa8.41□□□□□ -1.06
SS18-220ENST00000582092 MOGAT1Q96PD6 335 aa8.41□□□□□ -1.06
SS18-220ENST00000582092 BBC3Q96PG8 261 aaPredicted RBP8.41□□□□□ -1.06
SS18-220ENST00000582092 CNN2Q99439 309 aaKnown RBP8.41□□□□□ -1.06
SS18-220ENST00000582092 TBX5Q99593 518 aa8.41□□□□□ -1.06
SS18-220ENST00000582092 RERGLQ9H628 205 aa8.41□□□□□ -1.06
SS18-220ENST00000582092 PLGRKTQ9HBL7 147 aa8.41□□□□□ -1.06
SS18-220ENST00000582092 GALNT9Q9HCQ5 603 aa8.41□□□□□ -1.06
SS18-220ENST00000582092 NRIP3Q9NQ35 241 aa8.41□□□□□ -1.06
SS18-220ENST00000582092 SACM1LQ9NTJ5 587 aa8.41□□□□□ -1.06
SS18-220ENST00000582092 ERVK13-1Q9NX77 482 aa8.41□□□□□ -1.06
SS18-220ENST00000582092 TUBD1Q9UJT1 453 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms