RNA–Protein interactions for RNA: ENST00000579947.5

CCDC178-209, Transcript of coiled-coil domain containing 178, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC178, Length 2,925 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC178-209ENST00000579947 DDX39BQ13838 428 aaKnown RBP4.9□□□□□ -1.63
CCDC178-209ENST00000579947 CDKL4Q5MAI5 379 aa4.9□□□□□ -1.63
CCDC178-209ENST00000579947 TEX35Q5T0J7 233 aa4.9□□□□□ -1.63
CCDC178-209ENST00000579947 TMEM65Q6PI78 240 aa4.9□□□□□ -1.63
CCDC178-209ENST00000579947 SCAIQ8N9R8 606 aa4.9□□□□□ -1.63
CCDC178-209ENST00000579947 OR8B3Q8NGG8 313 aa4.9□□□□□ -1.63
CCDC178-209ENST00000579947 SLC35B2Q8TB61 432 aa4.9□□□□□ -1.63
CCDC178-209ENST00000579947 ZNF519Q8TB69 540 aa4.9□□□□□ -1.63
CCDC178-209ENST00000579947 CALML6Q8TD86 181 aa4.9□□□□□ -1.63
CCDC178-209ENST00000579947 AMDHD1Q96NU7 426 aa4.9□□□□□ -1.63
CCDC178-209ENST00000579947 OR8B2Q96RD0 313 aa4.9□□□□□ -1.63
CCDC178-209ENST00000579947 SPATA25Q9BR10 227 aa4.9□□□□□ -1.63
CCDC178-209ENST00000579947 CDADC1Q9BWV3 514 aa4.9□□□□□ -1.63
CCDC178-209ENST00000579947 SBDSQ9Y3A5 250 aaKnown RBP eCLIP4.9□□□□□ -1.63
CCDC178-209ENST00000579947 REXO2Q9Y3B8 237 aaKnown RBP4.9□□□□□ -1.63
CCDC178-209ENST00000579947 HDGFL3Q9Y3E1 203 aa4.9□□□□□ -1.63
CCDC178-209ENST00000579947 CCDC189A1A4V9 331 aa4.89□□□□□ -1.63
CCDC178-209ENST00000579947 C22orf46C9J442 243 aa4.89□□□□□ -1.63
CCDC178-209ENST00000579947 F2RL2O00254 374 aa4.89□□□□□ -1.63
CCDC178-209ENST00000579947 TP73O15350 636 aa4.89□□□□□ -1.63
CCDC178-209ENST00000579947 OIP5O43482 229 aa4.89□□□□□ -1.63
CCDC178-209ENST00000579947 DNAJA2O60884 412 aa4.89□□□□□ -1.63
CCDC178-209ENST00000579947 OTCP00480 354 aa4.89□□□□□ -1.63
CCDC178-209ENST00000579947 ZBED6P86452 979 aa4.89□□□□□ -1.63
CCDC178-209ENST00000579947 RBM20Q5T481 1227 aaKnown RBP4.89□□□□□ -1.63
CCDC178-209ENST00000579947 C9orf66Q5T8R8 295 aa4.89□□□□□ -1.63
CCDC178-209ENST00000579947 METTL11BQ5VVY1 283 aa4.89□□□□□ -1.63
CCDC178-209ENST00000579947 CCDC121Q6ZUS5 278 aa4.89□□□□□ -1.63
CCDC178-209ENST00000579947 FAM9CQ8IZT9 166 aa4.89□□□□□ -1.63
CCDC178-209ENST00000579947 OR5AU1Q8NGC0 362 aa4.89□□□□□ -1.63
CCDC178-209ENST00000579947 VANGL1Q8TAA9 524 aaPredicted RBP4.89□□□□□ -1.63
CCDC178-209ENST00000579947 TRPC4APQ8TEL6 797 aa4.89□□□□□ -1.63
CCDC178-209ENST00000579947 ZNF524Q96C55 264 aa4.89□□□□□ -1.63
CCDC178-209ENST00000579947 NAA11Q9BSU3 229 aaPredicted RBP4.89□□□□□ -1.63
CCDC178-209ENST00000579947 MUC13Q9H3R2 512 aa4.89□□□□□ -1.63
CCDC178-209ENST00000579947 KCNK9Q9NPC2 374 aa4.89□□□□□ -1.63
CCDC178-209ENST00000579947 GXYLT2A0PJZ3 443 aa4.89□□□□□ -1.63
CCDC178-209ENST00000579947 H3BUX3 64 aa4.89□□□□□ -1.63
CCDC178-209ENST00000579947 PHYHO14832 338 aa4.89□□□□□ -1.63
CCDC178-209ENST00000579947 SPRY3O43610 288 aa4.89□□□□□ -1.63
CCDC178-209ENST00000579947 SYNGR1O43759 233 aa4.89□□□□□ -1.63
CCDC178-209ENST00000579947 STK16O75716 305 aa4.89□□□□□ -1.63
CCDC178-209ENST00000579947 FSTL3O95633 263 aa4.89□□□□□ -1.63
CCDC178-209ENST00000579947 NUDT14O95848 222 aa4.89□□□□□ -1.63
CCDC178-209ENST00000579947 IFNA6P05013 189 aa4.89□□□□□ -1.63
CCDC178-209ENST00000579947 APRTP07741 180 aa4.89□□□□□ -1.63
CCDC178-209ENST00000579947 HSP90AA1P07900 732 aaKnown RBP4.89□□□□□ -1.63
CCDC178-209ENST00000579947 PITPNBP48739 271 aa4.89□□□□□ -1.63
CCDC178-209ENST00000579947 THBS3P49746 956 aa4.89□□□□□ -1.63
CCDC178-209ENST00000579947 IL23RQ5VWK5 629 aa4.89□□□□□ -1.63
CCDC178-209ENST00000579947 ADAMTSL2Q86TH1 951 aa4.89□□□□□ -1.63
CCDC178-209ENST00000579947 HOXB13Q92826 284 aaPredicted RBP4.89□□□□□ -1.63
CCDC178-209ENST00000579947 SF3B5Q9BWJ5 86 aaKnown RBP4.89□□□□□ -1.63
CCDC178-209ENST00000579947 QRSL1Q9H0R6 528 aaKnown RBP4.89□□□□□ -1.63
CCDC178-209ENST00000579947 POFUT1Q9H488 388 aa4.89□□□□□ -1.63
CCDC178-209ENST00000579947 UBQLN4Q9NRR5 601 aa4.89□□□□□ -1.63
CCDC178-209ENST00000579947 RAB6BQ9NRW1 208 aa4.89□□□□□ -1.63
CCDC178-209ENST00000579947 CYSLTR2Q9NS75 346 aa4.89□□□□□ -1.63
CCDC178-209ENST00000579947 SPIN1Q9Y657 262 aaPredicted RBP4.89□□□□□ -1.63
CCDC178-209ENST00000579947 CHST1O43916 411 aa4.88□□□□□ -1.63
CCDC178-209ENST00000579947 EIF1BO60739 113 aaKnown RBP4.88□□□□□ -1.63
CCDC178-209ENST00000579947 MTNR1BP49286 362 aa4.88□□□□□ -1.63
CCDC178-209ENST00000579947 CLK1P49759 484 aaKnown RBP4.88□□□□□ -1.63
CCDC178-209ENST00000579947 MMP15P51511 669 aa4.88□□□□□ -1.63
CCDC178-209ENST00000579947 HABP2Q14520 560 aaPredicted RBP4.88□□□□□ -1.63
CCDC178-209ENST00000579947 GSG1Q2KHT4 349 aa4.88□□□□□ -1.63
CCDC178-209ENST00000579947 SPRNQ5BIV9 151 aa4.88□□□□□ -1.63
CCDC178-209ENST00000579947 WDR25Q64LD2 544 aaPredicted RBP4.88□□□□□ -1.63
CCDC178-209ENST00000579947 METAP1DQ6UB28 335 aaPredicted RBP4.88□□□□□ -1.63
CCDC178-209ENST00000579947 FRA10AC1Q70Z53 315 aa4.88□□□□□ -1.63
CCDC178-209ENST00000579947 OR9K2Q8NGE7 335 aa4.88□□□□□ -1.63
CCDC178-209ENST00000579947 C11orf40Q8WZ69 217 aa4.88□□□□□ -1.63
CCDC178-209ENST00000579947 MYDGFQ969H8 173 aa4.88□□□□□ -1.63
CCDC178-209ENST00000579947 ALKBH3Q96Q83 286 aaPredicted RBP4.88□□□□□ -1.63
CCDC178-209ENST00000579947 MTERF1Q99551 399 aaKnown RBP4.88□□□□□ -1.63
CCDC178-209ENST00000579947 SEMA6AQ9H2E6 1030 aa4.88□□□□□ -1.63
CCDC178-209ENST00000579947 C19orf53Q9UNZ5 99 aaPredicted RBP4.88□□□□□ -1.63
CCDC178-209ENST00000579947 TRAPPC4Q9Y296 219 aa4.88□□□□□ -1.63
CCDC178-209ENST00000579947 CCDC175P0C221 793 aa4.88□□□□□ -1.63
CCDC178-209ENST00000579947 CNTFRP26992 372 aa4.88□□□□□ -1.63
CCDC178-209ENST00000579947 MYCNOSP40205 109 aa4.88□□□□□ -1.63
CCDC178-209ENST00000579947 HSPA7P48741 367 aa4.88□□□□□ -1.63
CCDC178-209ENST00000579947 GLO1Q04760 184 aa4.88□□□□□ -1.63
CCDC178-209ENST00000579947 QPRTQ15274 297 aa4.88□□□□□ -1.63
CCDC178-209ENST00000579947 AANATQ16613 207 aa4.88□□□□□ -1.63
CCDC178-209ENST00000579947 CCNYL2Q5T2Q4 361 aa4.88□□□□□ -1.63
CCDC178-209ENST00000579947 CD276Q5ZPR3 534 aa4.88□□□□□ -1.63
CCDC178-209ENST00000579947 LGALS9CQ6DKI2 356 aa4.88□□□□□ -1.63
CCDC178-209ENST00000579947 SLC27A4Q6P1M0 643 aa4.88□□□□□ -1.63
CCDC178-209ENST00000579947 C2CD4AQ8NCU7 369 aaPredicted RBP4.88□□□□□ -1.63
CCDC178-209ENST00000579947 BEND2Q8NDZ0 799 aa4.88□□□□□ -1.63
CCDC178-209ENST00000579947 ST8SIA1Q92185 356 aa4.88□□□□□ -1.63
CCDC178-209ENST00000579947 ZNF385AQ96PM9 386 aaKnown RBP4.88□□□□□ -1.63
CCDC178-209ENST00000579947 SERPINI1Q99574 410 aa4.88□□□□□ -1.63
CCDC178-209ENST00000579947 PFDN4Q9NQP4 134 aa4.88□□□□□ -1.63
CCDC178-209ENST00000579947 ZDHHC8Q9ULC8 765 aa4.88□□□□□ -1.63
CCDC178-209ENST00000579947 HMCN2Q8NDA2 5059 aa4.87□□□□□ -1.63
CCDC178-209ENST00000579947 KLK1P06870 262 aa4.87□□□□□ -1.63
CCDC178-209ENST00000579947 ETS1P14921 441 aa4.87□□□□□ -1.63
CCDC178-209ENST00000579947 DRD4P21917 467 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms