RNA–Protein interactions for RNA: ENST00000578733.5

CDK5RAP3-210, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 578 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-210ENST00000578733 EMC4Q5J8M3 183 aa10.08□□□□□ -0.8
CDK5RAP3-210ENST00000578733 TMEM201Q5SNT2 666 aa10.08□□□□□ -0.8
CDK5RAP3-210ENST00000578733 C1QL3Q5VWW1 255 aa10.08□□□□□ -0.8
CDK5RAP3-210ENST00000578733 CLEC18BQ6UXF7 455 aa10.08□□□□□ -0.8
CDK5RAP3-210ENST00000578733 RPTNQ6XPR3 784 aa10.08□□□□□ -0.8
CDK5RAP3-210ENST00000578733 SLC46A3Q7Z3Q1 461 aa10.08□□□□□ -0.8
CDK5RAP3-210ENST00000578733 HDDC2Q7Z4H3 204 aa10.08□□□□□ -0.8
CDK5RAP3-210ENST00000578733 ADGRE4PQ86SQ3 457 aa10.08□□□□□ -0.8
CDK5RAP3-210ENST00000578733 GPAT4Q86UL3 456 aa10.08□□□□□ -0.8
CDK5RAP3-210ENST00000578733 STK32CQ86UX6 486 aa10.08□□□□□ -0.8
CDK5RAP3-210ENST00000578733 AQP11Q8NBQ7 271 aa10.08□□□□□ -0.8
CDK5RAP3-210ENST00000578733 CLEC18CQ8NCF0 446 aa10.08□□□□□ -0.8
CDK5RAP3-210ENST00000578733 OR9Q2Q8NGE9 314 aa10.08□□□□□ -0.8
CDK5RAP3-210ENST00000578733 ZNF417Q8TAU3 575 aa10.08□□□□□ -0.8
CDK5RAP3-210ENST00000578733 PRR7Q8TB68 274 aa10.08□□□□□ -0.8
CDK5RAP3-210ENST00000578733 FNDC9Q8TBE3 224 aa10.08□□□□□ -0.8
CDK5RAP3-210ENST00000578733 RNF128Q8TEB7 428 aa10.08□□□□□ -0.8
CDK5RAP3-210ENST00000578733 ROBO4Q8WZ75 1007 aa10.08□□□□□ -0.8
CDK5RAP3-210ENST00000578733 ZNF587Q96SQ5 575 aaPredicted RBP10.08□□□□□ -0.8
CDK5RAP3-210ENST00000578733 PKP2Q99959 881 aa10.08□□□□□ -0.8
CDK5RAP3-210ENST00000578733 C9orf16Q9BUW7 83 aa10.08□□□□□ -0.8
CDK5RAP3-210ENST00000578733 DGCR6LQ9BY27 220 aa10.08□□□□□ -0.8
CDK5RAP3-210ENST00000578733 SRXN1Q9BYN0 137 aa10.08□□□□□ -0.8
CDK5RAP3-210ENST00000578733 GABARAPL1Q9H0R8 117 aa10.08□□□□□ -0.8
CDK5RAP3-210ENST00000578733 C8orf4Q9NR00 106 aa10.08□□□□□ -0.8
CDK5RAP3-210ENST00000578733 C20orf141Q9NUB4 165 aa10.08□□□□□ -0.8
CDK5RAP3-210ENST00000578733 CLCF1Q9UBD9 225 aa10.08□□□□□ -0.8
CDK5RAP3-210ENST00000578733 EMC9Q9Y3B6 208 aa10.08□□□□□ -0.8
CDK5RAP3-210ENST00000578733 DIDO1Q9BTC0 2240 aaKnown RBP10.07□□□□□ -0.8
CDK5RAP3-210ENST00000578733 IGHV3-15A0A0B4J1V0 119 aa10.07□□□□□ -0.8
CDK5RAP3-210ENST00000578733 A0A1W2PNV4 684 aa10.07□□□□□ -0.8
CDK5RAP3-210ENST00000578733 MBD3L4A6NDZ8 208 aaPredicted RBP10.07□□□□□ -0.8
CDK5RAP3-210ENST00000578733 MBD3L3A6NE82 208 aaPredicted RBP10.07□□□□□ -0.8
CDK5RAP3-210ENST00000578733 MBD3L5A6NJ08 208 aaPredicted RBP10.07□□□□□ -0.8
CDK5RAP3-210ENST00000578733 SAC3D1A6NKF1 404 aa10.07□□□□□ -0.8
CDK5RAP3-210ENST00000578733 HSPB2A8KAH6 182 aa10.07□□□□□ -0.8
CDK5RAP3-210ENST00000578733 LRRN3E7EW58 273 aa10.07□□□□□ -0.8
CDK5RAP3-210ENST00000578733 BLOC1S5-TXNDC5H3BN57 136 aa10.07□□□□□ -0.8
CDK5RAP3-210ENST00000578733 SMAD9O15198 467 aaKnown RBP10.07□□□□□ -0.8
CDK5RAP3-210ENST00000578733 NDUFB2O95178 105 aa10.07□□□□□ -0.8
CDK5RAP3-210ENST00000578733 CDH2P19022 906 aaPredicted RBP10.07□□□□□ -0.8
CDK5RAP3-210ENST00000578733 GNLYP22749 145 aa10.07□□□□□ -0.8
CDK5RAP3-210ENST00000578733 IST1P53990 364 aa10.07□□□□□ -0.8
CDK5RAP3-210ENST00000578733 H3F3AP84243 136 aa10.07□□□□□ -0.8
CDK5RAP3-210ENST00000578733 LTBQ06643 244 aa10.07□□□□□ -0.8
CDK5RAP3-210ENST00000578733 PUDPQ08623 228 aa10.07□□□□□ -0.8
CDK5RAP3-210ENST00000578733 ZP4Q12836 540 aa10.07□□□□□ -0.8
CDK5RAP3-210ENST00000578733 POU4F3Q15319 338 aa10.07□□□□□ -0.8
CDK5RAP3-210ENST00000578733 HSPB2Q16082 182 aa10.07□□□□□ -0.8
CDK5RAP3-210ENST00000578733 IGFBP7Q16270 282 aa10.07□□□□□ -0.8
CDK5RAP3-210ENST00000578733 ZBED5Q49AG3 693 aa10.07□□□□□ -0.8
CDK5RAP3-210ENST00000578733 ALG10Q5BKT4 473 aa10.07□□□□□ -0.8
CDK5RAP3-210ENST00000578733 RIPPLY2Q5TAB7 128 aa10.07□□□□□ -0.8
CDK5RAP3-210ENST00000578733 ABLIM2Q6H8Q1 611 aa10.07□□□□□ -0.8
CDK5RAP3-210ENST00000578733 HMBOX1Q6NT76 420 aa10.07□□□□□ -0.8
CDK5RAP3-210ENST00000578733 PGBD2Q6P3X8 592 aa10.07□□□□□ -0.8
CDK5RAP3-210ENST00000578733 ZER1Q7Z7L7 766 aa10.07□□□□□ -0.8
CDK5RAP3-210ENST00000578733 UEVLDQ8IX04 471 aa10.07□□□□□ -0.8
CDK5RAP3-210ENST00000578733 FAM26EQ8N5C1 309 aa10.07□□□□□ -0.8
CDK5RAP3-210ENST00000578733 TMEM99Q8N816 258 aa10.07□□□□□ -0.8
CDK5RAP3-210ENST00000578733 ANKK1Q8NFD2 765 aa10.07□□□□□ -0.8
CDK5RAP3-210ENST00000578733 OR52L1Q8NGH7 329 aa10.07□□□□□ -0.8
CDK5RAP3-210ENST00000578733 MBD3L2Q8NHZ7 208 aaPredicted RBP10.07□□□□□ -0.8
CDK5RAP3-210ENST00000578733 RND1Q92730 232 aa10.07□□□□□ -0.8
CDK5RAP3-210ENST00000578733 EME1Q96AY2 570 aa10.07□□□□□ -0.8
CDK5RAP3-210ENST00000578733 GMPPAQ96IJ6 420 aaPredicted RBP10.07□□□□□ -0.8
CDK5RAP3-210ENST00000578733 OXGR1Q96P68 337 aa10.07□□□□□ -0.8
CDK5RAP3-210ENST00000578733 MOGAT1Q96PD6 335 aa10.07□□□□□ -0.8
CDK5RAP3-210ENST00000578733 FEVQ99581 238 aa10.07□□□□□ -0.8
CDK5RAP3-210ENST00000578733 RBM4BQ9BQ04 359 aaKnown RBP10.07□□□□□ -0.8
CDK5RAP3-210ENST00000578733 TTYH2Q9BSA4 534 aa10.07□□□□□ -0.8
CDK5RAP3-210ENST00000578733 RBM4Q9BWF3 364 aaKnown RBP10.07□□□□□ -0.8
CDK5RAP3-210ENST00000578733 UCK2Q9BZX2 261 aa10.07□□□□□ -0.8
CDK5RAP3-210ENST00000578733 VCXQ9H320 206 aa10.07□□□□□ -0.8
CDK5RAP3-210ENST00000578733 RNF122Q9H9V4 155 aa10.07□□□□□ -0.8
CDK5RAP3-210ENST00000578733 NTN4Q9HB63 628 aa10.07□□□□□ -0.8
CDK5RAP3-210ENST00000578733 PARPBPQ9NWS1 579 aa10.07□□□□□ -0.8
CDK5RAP3-210ENST00000578733 VNN3Q9NY84 501 aa10.07□□□□□ -0.8
CDK5RAP3-210ENST00000578733 COQ3Q9NZJ6 369 aa10.07□□□□□ -0.8
CDK5RAP3-210ENST00000578733 STX18Q9P2W9 335 aaKnown RBP10.07□□□□□ -0.8
CDK5RAP3-210ENST00000578733 HIF3AQ9Y2N7 669 aa10.07□□□□□ -0.8
CDK5RAP3-210ENST00000578733 MEMO1Q9Y316 297 aa10.07□□□□□ -0.8
CDK5RAP3-210ENST00000578733 NOX1Q9Y5S8 564 aa10.07□□□□□ -0.8
CDK5RAP3-210ENST00000578733 HIVEP3Q5T1R4 2406 aa10.07□□□□□ -0.8
CDK5RAP3-210ENST00000578733 NCOA6Q14686 2063 aaPredicted RBP10.06□□□□□ -0.8
CDK5RAP3-210ENST00000578733 PCNX1Q96RV3 2341 aa10.06□□□□□ -0.8
CDK5RAP3-210ENST00000578733 RELNP78509 3460 aa10.06□□□□□ -0.8
CDK5RAP3-210ENST00000578733 A0A1W2PRG6 482 aa10.06□□□□□ -0.8
CDK5RAP3-210ENST00000578733 ZNF724A8MTY0 619 aa10.06□□□□□ -0.8
CDK5RAP3-210ENST00000578733 PLPP3O14495 311 aa10.06□□□□□ -0.8
CDK5RAP3-210ENST00000578733 GASTP01350 101 aa10.06□□□□□ -0.8
CDK5RAP3-210ENST00000578733 YES1P07947 543 aa10.06□□□□□ -0.8
CDK5RAP3-210ENST00000578733 TMIGD3P0DMS9 266 aaPredicted RBP10.06□□□□□ -0.8
CDK5RAP3-210ENST00000578733 MAKP20794 623 aa10.06□□□□□ -0.8
CDK5RAP3-210ENST00000578733 SLC6A6P31641 620 aa10.06□□□□□ -0.8
CDK5RAP3-210ENST00000578733 RPL4P36578 427 aaKnown RBP10.06□□□□□ -0.8
CDK5RAP3-210ENST00000578733 GSSP48637 474 aa10.06□□□□□ -0.8
CDK5RAP3-210ENST00000578733 DAP3P51398 398 aaKnown RBP10.06□□□□□ -0.8
CDK5RAP3-210ENST00000578733 SMSP52788 366 aa10.06□□□□□ -0.8
CDK5RAP3-210ENST00000578733 SLC16A1P53985 500 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms