RNA–Protein interactions for RNA: ENST00000578519.5

SKA2-204, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 3

Gene SKA2, Length 894 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-204ENST00000578519 FCRLBQ6BAA4 426 aa10.09□□□□□ -0.79
SKA2-204ENST00000578519 C22orf42Q6IC83 251 aa10.09□□□□□ -0.79
SKA2-204ENST00000578519 RPL22L1Q6P5R6 122 aaKnown RBP10.09□□□□□ -0.79
SKA2-204ENST00000578519 POMZP3Q6PJE2 187 aa10.09□□□□□ -0.79
SKA2-204ENST00000578519 FAM198BQ6UWH4 519 aa10.09□□□□□ -0.79
SKA2-204ENST00000578519 ZNF517Q6ZMY9 492 aaPredicted RBP10.09□□□□□ -0.79
SKA2-204ENST00000578519 VASH1Q7L8A9 365 aaPredicted RBP10.09□□□□□ -0.79
SKA2-204ENST00000578519 SLC16A9Q7RTY1 509 aa10.09□□□□□ -0.79
SKA2-204ENST00000578519 IGFN1Q86VF2 1251 aa10.09□□□□□ -0.79
SKA2-204ENST00000578519 TPRA1Q86W33 373 aa10.09□□□□□ -0.79
SKA2-204ENST00000578519 MARCH9Q86YJ5 346 aa10.09□□□□□ -0.79
SKA2-204ENST00000578519 ESX1Q8N693 406 aa10.09□□□□□ -0.79
SKA2-204ENST00000578519 ARIH2OSQ8N7S6 290 aa10.09□□□□□ -0.79
SKA2-204ENST00000578519 TMEM99Q8N816 258 aa10.09□□□□□ -0.79
SKA2-204ENST00000578519 LRRC75AQ8NAA5 344 aa10.09□□□□□ -0.79
SKA2-204ENST00000578519 ZNF485Q8NCK3 441 aa10.09□□□□□ -0.79
SKA2-204ENST00000578519 LSM14AQ8ND56 463 aaKnown RBP10.09□□□□□ -0.79
SKA2-204ENST00000578519 ACOT12Q8WYK0 555 aa10.09□□□□□ -0.79
SKA2-204ENST00000578519 THRSPQ92748 146 aa10.09□□□□□ -0.79
SKA2-204ENST00000578519 KISS1RQ969F8 398 aaPredicted RBP10.09□□□□□ -0.79
SKA2-204ENST00000578519 C8orf44Q96CB5 159 aa10.09□□□□□ -0.79
SKA2-204ENST00000578519 IMMP1LQ96LU5 166 aa10.09□□□□□ -0.79
SKA2-204ENST00000578519 Q96M85 177 aa10.09□□□□□ -0.79
SKA2-204ENST00000578519 RASL10BQ96S79 203 aa10.09□□□□□ -0.79
SKA2-204ENST00000578519 NMNAT3Q96T66 252 aa10.09□□□□□ -0.79
SKA2-204ENST00000578519 ALG12Q9BV10 488 aa10.09□□□□□ -0.79
SKA2-204ENST00000578519 CDADC1Q9BWV3 514 aa10.09□□□□□ -0.79
SKA2-204ENST00000578519 NMNAT2Q9BZQ4 307 aa10.09□□□□□ -0.79
SKA2-204ENST00000578519 B3GNT4Q9C0J1 378 aa10.09□□□□□ -0.79
SKA2-204ENST00000578519 TXNIPQ9H3M7 391 aa10.09□□□□□ -0.79
SKA2-204ENST00000578519 SNTG1Q9NSN8 517 aa10.09□□□□□ -0.79
SKA2-204ENST00000578519 SACM1LQ9NTJ5 587 aa10.09□□□□□ -0.79
SKA2-204ENST00000578519 ZNF346Q9UL40 294 aaKnown RBP10.09□□□□□ -0.79
SKA2-204ENST00000578519 FARSAQ9Y285 508 aaKnown RBP10.09□□□□□ -0.79
SKA2-204ENST00000578519 SF3B6Q9Y3B4 125 aaKnown RBP10.09□□□□□ -0.79
SKA2-204ENST00000578519 WIF1Q9Y5W5 379 aa10.09□□□□□ -0.79
SKA2-204ENST00000578519 FKBP7Q9Y680 259 aa10.09□□□□□ -0.79
SKA2-204ENST00000578519 CACNA1EQ15878 2313 aa10.08□□□□□ -0.8
SKA2-204ENST00000578519 RANBP2P49792 3224 aaKnown RBP10.08□□□□□ -0.8
SKA2-204ENST00000578519 LNP1A1A4G5 178 aa10.08□□□□□ -0.8
SKA2-204ENST00000578519 NPIPB13A6NJU9 1138 aa10.08□□□□□ -0.8
SKA2-204ENST00000578519 NPIPB4C9JG80 1138 aa10.08□□□□□ -0.8
SKA2-204ENST00000578519 ETV2O00321 342 aaPredicted RBP10.08□□□□□ -0.8
SKA2-204ENST00000578519 RGS5O15539 181 aa10.08□□□□□ -0.8
SKA2-204ENST00000578519 PLPP2O43688 288 aa10.08□□□□□ -0.8
SKA2-204ENST00000578519 GMFGO60234 142 aa10.08□□□□□ -0.8
SKA2-204ENST00000578519 GPRIN2O60269 458 aa10.08□□□□□ -0.8
SKA2-204ENST00000578519 CBFA2T3O75081 653 aa10.08□□□□□ -0.8
SKA2-204ENST00000578519 NPIPB7O75200 414 aa10.08□□□□□ -0.8
SKA2-204ENST00000578519 TMEM127O75204 238 aa10.08□□□□□ -0.8
SKA2-204ENST00000578519 SNX4O95219 450 aa10.08□□□□□ -0.8
SKA2-204ENST00000578519 HPP00738 406 aa10.08□□□□□ -0.8
SKA2-204ENST00000578519 TFPIP10646 304 aa10.08□□□□□ -0.8
SKA2-204ENST00000578519 ZNF28P17035 718 aa10.08□□□□□ -0.8
SKA2-204ENST00000578519 TCN2P20062 427 aa10.08□□□□□ -0.8
SKA2-204ENST00000578519 AHCYP23526 432 aa10.08□□□□□ -0.8
SKA2-204ENST00000578519 SDC2P34741 201 aa10.08□□□□□ -0.8
SKA2-204ENST00000578519 IDUAP35475 653 aa10.08□□□□□ -0.8
SKA2-204ENST00000578519 RPS19P39019 145 aaKnown RBP10.08□□□□□ -0.8
SKA2-204ENST00000578519 CASP3P42574 277 aa10.08□□□□□ -0.8
SKA2-204ENST00000578519 MTNR1BP49286 362 aa10.08□□□□□ -0.8
SKA2-204ENST00000578519 LTBQ06643 244 aa10.08□□□□□ -0.8
SKA2-204ENST00000578519 TBC1D25Q3MII6 688 aa10.08□□□□□ -0.8
SKA2-204ENST00000578519 LCN10Q6JVE6 187 aa10.08□□□□□ -0.8
SKA2-204ENST00000578519 FAM199XQ6PEV8 388 aaPredicted RBP10.08□□□□□ -0.8
SKA2-204ENST00000578519 H1FNTQ75WM6 255 aaPredicted RBP10.08□□□□□ -0.8
SKA2-204ENST00000578519 FAM122BQ7Z309 247 aa10.08□□□□□ -0.8
SKA2-204ENST00000578519 RPS19BP1Q86WX3 136 aaKnown RBP10.08□□□□□ -0.8
SKA2-204ENST00000578519 CACTIN-AS1Q8N1I8 211 aa10.08□□□□□ -0.8
SKA2-204ENST00000578519 TMEM156Q8N614 296 aa10.08□□□□□ -0.8
SKA2-204ENST00000578519 OR6K6Q8NGW6 343 aa10.08□□□□□ -0.8
SKA2-204ENST00000578519 FNDC8Q8TC99 324 aa10.08□□□□□ -0.8
SKA2-204ENST00000578519 ASB17Q8WXJ9 295 aa10.08□□□□□ -0.8
SKA2-204ENST00000578519 TM9SF4Q92544 642 aa10.08□□□□□ -0.8
SKA2-204ENST00000578519 TMEM203Q969S6 136 aa10.08□□□□□ -0.8
SKA2-204ENST00000578519 SLC25A46Q96AG3 418 aa10.08□□□□□ -0.8
SKA2-204ENST00000578519 ZBTB8AQ96BR9 441 aa10.08□□□□□ -0.8
SKA2-204ENST00000578519 PPP1R14BQ96C90 147 aa10.08□□□□□ -0.8
SKA2-204ENST00000578519 NXPE2Q96DL1 559 aa10.08□□□□□ -0.8
SKA2-204ENST00000578519 ZMYND19Q96E35 227 aaPredicted RBP10.08□□□□□ -0.8
SKA2-204ENST00000578519 C4orf36Q96KX1 117 aa10.08□□□□□ -0.8
SKA2-204ENST00000578519 SGCZQ96LD1 299 aa10.08□□□□□ -0.8
SKA2-204ENST00000578519 ADAD1Q96M93 576 aaKnown RBP10.08□□□□□ -0.8
SKA2-204ENST00000578519 KLHL15Q96M94 604 aa10.08□□□□□ -0.8
SKA2-204ENST00000578519 IP6K3Q96PC2 410 aa10.08□□□□□ -0.8
SKA2-204ENST00000578519 MOGAT1Q96PD6 335 aa10.08□□□□□ -0.8
SKA2-204ENST00000578519 TBX5Q99593 518 aa10.08□□□□□ -0.8
SKA2-204ENST00000578519 TMED9Q9BVK6 235 aa10.08□□□□□ -0.8
SKA2-204ENST00000578519 HCAR1Q9BXC0 346 aa10.08□□□□□ -0.8
SKA2-204ENST00000578519 GPR87Q9BY21 358 aa10.08□□□□□ -0.8
SKA2-204ENST00000578519 SMOC1Q9H4F8 434 aa10.08□□□□□ -0.8
SKA2-204ENST00000578519 MED11Q9P086 117 aa10.08□□□□□ -0.8
SKA2-204ENST00000578519 PISDQ9UG56 409 aa10.08□□□□□ -0.8
SKA2-204ENST00000578519 ADAM18Q9Y3Q7 739 aa10.08□□□□□ -0.8
SKA2-204ENST00000578519 UGT2A1Q9Y4X1 527 aa10.08□□□□□ -0.8
SKA2-204ENST00000578519 C5orf42Q9H799 3197 aa10.08□□□□□ -0.8
SKA2-204ENST00000578519 A0A1W2PQL4 384 aaPredicted RBP10.07□□□□□ -0.8
SKA2-204ENST00000578519 TMEM200CA6NKL6 621 aa10.07□□□□□ -0.8
SKA2-204ENST00000578519 C21orf140B9A014 251 aa10.07□□□□□ -0.8
SKA2-204ENST00000578519 LRRN3E7EW58 273 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms