RNA–Protein interactions for RNA: ENST00000576502.5

NDE1-211, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 2

Gene NDE1, Length 1,131 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-211ENST00000576502 NDUFAB1O14561 156 aa12.17□□□□□ -0.46
NDE1-211ENST00000576502 FZD7O75084 574 aa12.17□□□□□ -0.46
NDE1-211ENST00000576502 SLC43A1O75387 559 aa12.17□□□□□ -0.46
NDE1-211ENST00000576502 KRT34O76011 436 aa12.17□□□□□ -0.46
NDE1-211ENST00000576502 OPN1SWP03999 348 aa12.17□□□□□ -0.46
NDE1-211ENST00000576502 ITGA5P08648 1049 aa12.17□□□□□ -0.46
NDE1-211ENST00000576502 GRPRP30550 384 aa12.17□□□□□ -0.46
NDE1-211ENST00000576502 IFNA8P32881 189 aa12.17□□□□□ -0.46
NDE1-211ENST00000576502 P2RY4P51582 365 aa12.17□□□□□ -0.46
NDE1-211ENST00000576502 RPS4XP62701 263 aaKnown RBP12.17□□□□□ -0.46
NDE1-211ENST00000576502 SF3A3Q12874 501 aaKnown RBP eCLIP12.17□□□□□ -0.46
NDE1-211ENST00000576502 GABRA6Q16445 453 aa12.17□□□□□ -0.46
NDE1-211ENST00000576502 DUSP7Q16829 419 aa12.17□□□□□ -0.46
NDE1-211ENST00000576502 ZNF672Q499Z4 452 aaPredicted RBP12.17□□□□□ -0.46
NDE1-211ENST00000576502 Q5PR19 223 aa12.17□□□□□ -0.46
NDE1-211ENST00000576502 CGB2Q6NT52 195 aa12.17□□□□□ -0.46
NDE1-211ENST00000576502 UEVLDQ8IX04 471 aa12.17□□□□□ -0.46
NDE1-211ENST00000576502 ANKK1Q8NFD2 765 aa12.17□□□□□ -0.46
NDE1-211ENST00000576502 ZNF417Q8TAU3 575 aa12.17□□□□□ -0.46
NDE1-211ENST00000576502 C10orf82Q8WW14 230 aa12.17□□□□□ -0.46
NDE1-211ENST00000576502 TAAR8Q969N4 342 aa12.17□□□□□ -0.46
NDE1-211ENST00000576502 TRMT61AQ96FX7 289 aaKnown RBP12.17□□□□□ -0.46
NDE1-211ENST00000576502 ZNF587Q96SQ5 575 aaPredicted RBP12.17□□□□□ -0.46
NDE1-211ENST00000576502 GSX2Q9BZM3 304 aa12.17□□□□□ -0.46
NDE1-211ENST00000576502 LINC00470Q9BZP3 86 aa12.17□□□□□ -0.46
NDE1-211ENST00000576502 POLR2J2Q9GZM3 115 aaKnown RBP12.17□□□□□ -0.46
NDE1-211ENST00000576502 POLR2J3Q9H1A7 115 aaKnown RBP12.17□□□□□ -0.46
NDE1-211ENST00000576502 POU2F3Q9UKI9 436 aa12.17□□□□□ -0.46
NDE1-211ENST00000576502 SLC25A15Q9Y619 301 aa12.17□□□□□ -0.46
NDE1-211ENST00000576502 LOC102725191A0A1B0GVB3 256 aa12.16□□□□□ -0.46
NDE1-211ENST00000576502 TRAPPC13A5PLN9 417 aa12.16□□□□□ -0.46
NDE1-211ENST00000576502 FAM220BPB1ANY3 271 aa12.16□□□□□ -0.46
NDE1-211ENST00000576502 ABCD4O14678 606 aa12.16□□□□□ -0.46
NDE1-211ENST00000576502 OR6A2O95222 327 aa12.16□□□□□ -0.46
NDE1-211ENST00000576502 PLAUP00749 431 aa12.16□□□□□ -0.46
NDE1-211ENST00000576502 NTF4P34130 210 aa12.16□□□□□ -0.46
NDE1-211ENST00000576502 CDH11P55287 796 aa12.16□□□□□ -0.46
NDE1-211ENST00000576502 CDH12P55289 794 aa12.16□□□□□ -0.46
NDE1-211ENST00000576502 CLDN17P56750 224 aa12.16□□□□□ -0.46
NDE1-211ENST00000576502 RIPPLY3P57055 190 aa12.16□□□□□ -0.46
NDE1-211ENST00000576502 UBE2NP61088 152 aaKnown RBP12.16□□□□□ -0.46
NDE1-211ENST00000576502 FOXD4Q12950 439 aaPredicted RBP12.16□□□□□ -0.46
NDE1-211ENST00000576502 PMS2P3Q13401 168 aa12.16□□□□□ -0.46
NDE1-211ENST00000576502 RABL3Q5HYI8 236 aa12.16□□□□□ -0.46
NDE1-211ENST00000576502 ENTPD8Q5MY95 495 aa12.16□□□□□ -0.46
NDE1-211ENST00000576502 C9orf135Q5VTT2 229 aa12.16□□□□□ -0.46
NDE1-211ENST00000576502 TTC33Q6PID6 262 aaPredicted RBP12.16□□□□□ -0.46
NDE1-211ENST00000576502 COMTD1Q86VU5 262 aa12.16□□□□□ -0.46
NDE1-211ENST00000576502 CALHM3Q86XJ0 350 aa12.16□□□□□ -0.46
NDE1-211ENST00000576502 EPHX4Q8IUS5 362 aa12.16□□□□□ -0.46
NDE1-211ENST00000576502 GPR137CQ8N3F9 429 aa12.16□□□□□ -0.46
NDE1-211ENST00000576502 ZIC4Q8N9L1 334 aa12.16□□□□□ -0.46
NDE1-211ENST00000576502 PIK3C3Q8NEB9 887 aa12.16□□□□□ -0.46
NDE1-211ENST00000576502 OR2T12Q8NG77 320 aa12.16□□□□□ -0.46
NDE1-211ENST00000576502 VANGL1Q8TAA9 524 aaPredicted RBP12.16□□□□□ -0.46
NDE1-211ENST00000576502 LZICQ8WZA0 190 aa12.16□□□□□ -0.46
NDE1-211ENST00000576502 GTPBP3Q969Y2 492 aaKnown RBP12.16□□□□□ -0.46
NDE1-211ENST00000576502 TAMM41Q96BW9 452 aa12.16□□□□□ -0.46
NDE1-211ENST00000576502 PERPQ96FX8 193 aa12.16□□□□□ -0.46
NDE1-211ENST00000576502 KCNS3Q9BQ31 491 aa12.16□□□□□ -0.46
NDE1-211ENST00000576502 SLC19A3Q9BZV2 496 aa12.16□□□□□ -0.46
NDE1-211ENST00000576502 FKRPQ9H9S5 495 aa12.16□□□□□ -0.46
NDE1-211ENST00000576502 B3GAT2Q9NPZ5 323 aa12.16□□□□□ -0.46
NDE1-211ENST00000576502 SLC17A5Q9NRA2 495 aa12.16□□□□□ -0.46
NDE1-211ENST00000576502 MRPL39Q9NYK5 338 aaKnown RBP12.16□□□□□ -0.46
NDE1-211ENST00000576502 NOX1Q9Y5S8 564 aa12.16□□□□□ -0.46
NDE1-211ENST00000576502 CELSR1Q9NYQ6 3014 aa12.16□□□□□ -0.46
NDE1-211ENST00000576502 IGKV1D-42A0A075B6H8 117 aa12.15□□□□□ -0.46
NDE1-211ENST00000576502 DPRXA6NFQ7 191 aa12.15□□□□□ -0.46
NDE1-211ENST00000576502 CPSF4LA6NMK7 179 aaKnown RBP12.15□□□□□ -0.46
NDE1-211ENST00000576502 FAM171A2A8MVW0 826 aa12.15□□□□□ -0.46
NDE1-211ENST00000576502 M0R1B8 84 aa12.15□□□□□ -0.46
NDE1-211ENST00000576502 FXYD1O00168 92 aa12.15□□□□□ -0.46
NDE1-211ENST00000576502 HIST1H2ABP04908 130 aa12.15□□□□□ -0.46
NDE1-211ENST00000576502 HOXB1P14653 301 aaPredicted RBP12.15□□□□□ -0.46
NDE1-211ENST00000576502 PAX1P15863 534 aa12.15□□□□□ -0.46
NDE1-211ENST00000576502 PTH2RP49190 550 aa12.15□□□□□ -0.46
NDE1-211ENST00000576502 SELENOPP49908 381 aa12.15□□□□□ -0.46
NDE1-211ENST00000576502 GZMMP51124 257 aa12.15□□□□□ -0.46
NDE1-211ENST00000576502 ZNF83P51522 516 aa12.15□□□□□ -0.46
NDE1-211ENST00000576502 PUDPQ08623 228 aa12.15□□□□□ -0.46
NDE1-211ENST00000576502 ETFDHQ16134 617 aa12.15□□□□□ -0.46
NDE1-211ENST00000576502 SLC22A25Q6T423 547 aa12.15□□□□□ -0.46
NDE1-211ENST00000576502 HIST3H2AQ7L7L0 130 aa12.15□□□□□ -0.46
NDE1-211ENST00000576502 SPATA21Q7Z572 469 aa12.15□□□□□ -0.46
NDE1-211ENST00000576502 KBTBD8Q8NFY9 601 aa12.15□□□□□ -0.46
NDE1-211ENST00000576502 GPR32P1Q8NGA4 272 aa12.15□□□□□ -0.46
NDE1-211ENST00000576502 OR6T1Q8NGN1 323 aa12.15□□□□□ -0.46
NDE1-211ENST00000576502 ADAMTS16Q8TE57 1224 aa12.15□□□□□ -0.46
NDE1-211ENST00000576502 SMAP2Q8WU79 429 aaPredicted RBP12.15□□□□□ -0.46
NDE1-211ENST00000576502 HIST1H2ACQ93077 130 aa12.15□□□□□ -0.46
NDE1-211ENST00000576502 BOD1Q96IK1 185 aa12.15□□□□□ -0.46
NDE1-211ENST00000576502 ALKBH3Q96Q83 286 aaPredicted RBP12.15□□□□□ -0.46
NDE1-211ENST00000576502 HOPXQ9BPY8 73 aaPredicted RBP12.15□□□□□ -0.46
NDE1-211ENST00000576502 BDH2Q9BUT1 245 aa12.15□□□□□ -0.46
NDE1-211ENST00000576502 PRR14Q9BWN1 585 aa12.15□□□□□ -0.46
NDE1-211ENST00000576502 PCDHAC1Q9H158 963 aa12.15□□□□□ -0.46
NDE1-211ENST00000576502 EFCAB1Q9HAE3 211 aa12.15□□□□□ -0.46
NDE1-211ENST00000576502 CISD1Q9NZ45 108 aaKnown RBP12.15□□□□□ -0.46
NDE1-211ENST00000576502 LAMP3Q9UQV4 416 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 212.4 ms