RNA–Protein interactions for RNA: ENST00000573600.5

CTDNEP1-208, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CTDNEP1, Length 1,724 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-208ENST00000573600 GYPBP06028 91 aa26.31■■□□□ 1.8
CTDNEP1-208ENST00000573600 CPEP16870 476 aa26.31■■□□□ 1.8
CTDNEP1-208ENST00000573600 ADH6P28332 368 aa26.31■■□□□ 1.8
CTDNEP1-208ENST00000573600 UGT2B10P36537 528 aa26.31■■□□□ 1.8
CTDNEP1-208ENST00000573600 EIF1P41567 113 aaKnown RBP26.31■■□□□ 1.8
CTDNEP1-208ENST00000573600 GGTLC2Q14390 218 aa26.31■■□□□ 1.8
CTDNEP1-208ENST00000573600 PON3Q15166 354 aa26.31■■□□□ 1.8
CTDNEP1-208ENST00000573600 LEG1Q6P5S2 330 aa26.31■■□□□ 1.8
CTDNEP1-208ENST00000573600 TMPRSS11AQ6ZMR5 421 aa26.31■■□□□ 1.8
CTDNEP1-208ENST00000573600 ZNF485Q8NCK3 441 aa26.31■■□□□ 1.8
CTDNEP1-208ENST00000573600 NDNFQ8TB73 568 aa26.31■■□□□ 1.8
CTDNEP1-208ENST00000573600 GATAD2BQ8WXI9 593 aa26.31■■□□□ 1.8
CTDNEP1-208ENST00000573600 ZHX1-C8orf76Q96EF9 292 aa26.31■■□□□ 1.8
CTDNEP1-208ENST00000573600 IP6K3Q96PC2 410 aa26.31■■□□□ 1.8
CTDNEP1-208ENST00000573600 OR51E2Q9H255 320 aa26.31■■□□□ 1.8
CTDNEP1-208ENST00000573600 ADGRL4Q9HBW9 690 aa26.31■■□□□ 1.8
CTDNEP1-208ENST00000573600 INIPQ9NRY2 104 aa26.31■■□□□ 1.8
CTDNEP1-208ENST00000573600 NDUFB11Q9NX14 153 aa26.31■■□□□ 1.8
CTDNEP1-208ENST00000573600 FBXL2Q9UKC9 423 aa26.31■■□□□ 1.8
CTDNEP1-208ENST00000573600 A0A087WZY1 265 aa26.3■■□□□ 1.8
CTDNEP1-208ENST00000573600 OR6C68A6NDL8 312 aa26.3■■□□□ 1.8
CTDNEP1-208ENST00000573600 CCL3P10147 92 aa26.3■■□□□ 1.8
CTDNEP1-208ENST00000573600 SLC25A1P53007 311 aa26.3■■□□□ 1.8
CTDNEP1-208ENST00000573600 LIMK1P53667 647 aa26.3■■□□□ 1.8
CTDNEP1-208ENST00000573600 ACTC1P68032 377 aa26.3■■□□□ 1.8
CTDNEP1-208ENST00000573600 ACTA1P68133 377 aa26.3■■□□□ 1.8
CTDNEP1-208ENST00000573600 ACSM1Q08AH1 577 aa26.3■■□□□ 1.8
CTDNEP1-208ENST00000573600 INPP5JQ15735 1006 aaPredicted RBP26.3■■□□□ 1.8
CTDNEP1-208ENST00000573600 JMJD6Q6NYC1 403 aaPredicted RBP26.3■■□□□ 1.8
CTDNEP1-208ENST00000573600 GDPGP1Q6ZNW5 385 aa26.3■■□□□ 1.8
CTDNEP1-208ENST00000573600 POMGNT2Q8NAT1 580 aa26.3■■□□□ 1.8
CTDNEP1-208ENST00000573600 POC1BQ8TC44 478 aa26.3■■□□□ 1.8
CTDNEP1-208ENST00000573600 TSPAN32Q96QS1 320 aa26.3■■□□□ 1.8
CTDNEP1-208ENST00000573600 SEC14L4Q9UDX3 406 aa26.3■■□□□ 1.8
CTDNEP1-208ENST00000573600 DAPL1A0PJW8 107 aa26.29■■□□□ 1.8
CTDNEP1-208ENST00000573600 PSMA1P25786 263 aaKnown RBP26.29■■□□□ 1.8
CTDNEP1-208ENST00000573600 TUBA1BP68363 451 aa26.29■■□□□ 1.8
CTDNEP1-208ENST00000573600 ROR2Q01974 943 aaKnown RBP26.29■■□□□ 1.8
CTDNEP1-208ENST00000573600 ZNF800Q2TB10 664 aaPredicted RBP eCLIP26.29■■□□□ 1.8
CTDNEP1-208ENST00000573600 SLC6A19Q695T7 634 aa26.29■■□□□ 1.8
CTDNEP1-208ENST00000573600 USP43Q70EL4 1123 aa26.29■■□□□ 1.8
CTDNEP1-208ENST00000573600 TUBA1AQ71U36 451 aa26.29■■□□□ 1.8
CTDNEP1-208ENST00000573600 GPALPP1Q8IXQ4 340 aa26.29■■□□□ 1.8
CTDNEP1-208ENST00000573600 SCAIQ8N9R8 606 aa26.29■■□□□ 1.8
CTDNEP1-208ENST00000573600 ZBTB8AQ96BR9 441 aa26.29■■□□□ 1.8
CTDNEP1-208ENST00000573600 PCDHGB7Q9Y5F8 929 aa26.29■■□□□ 1.8
CTDNEP1-208ENST00000573600 CUL9Q8IWT3 2517 aa26.29■■□□□ 1.8
CTDNEP1-208ENST00000573600 RNF13O43567 381 aa26.28■■□□□ 1.8
CTDNEP1-208ENST00000573600 SPI1P17947 270 aa26.28■■□□□ 1.8
CTDNEP1-208ENST00000573600 FKBP2P26885 142 aaKnown RBP26.28■■□□□ 1.8
CTDNEP1-208ENST00000573600 CDKN2AP42771 156 aaKnown RBP26.28■■□□□ 1.8
CTDNEP1-208ENST00000573600 KRR1Q13601 381 aaKnown RBP26.28■■□□□ 1.8
CTDNEP1-208ENST00000573600 TPBGQ13641 420 aa26.28■■□□□ 1.8
CTDNEP1-208ENST00000573600 PHC2Q8IXK0 858 aa26.28■■□□□ 1.8
CTDNEP1-208ENST00000573600 TMEM99Q8N816 258 aa26.28■■□□□ 1.8
CTDNEP1-208ENST00000573600 SMPDL3BQ92485 455 aa26.28■■□□□ 1.8
CTDNEP1-208ENST00000573600 DNAJA3Q96EY1 480 aa26.28■■□□□ 1.8
CTDNEP1-208ENST00000573600 CHCHD6Q9BRQ6 235 aa26.28■■□□□ 1.8
CTDNEP1-208ENST00000573600 ZNF346Q9UL40 294 aaKnown RBP26.28■■□□□ 1.8
CTDNEP1-208ENST00000573600 PCSK5Q92824 1860 aa26.28■■□□□ 1.8
CTDNEP1-208ENST00000573600 EML6Q6ZMW3 1958 aa26.28■■□□□ 1.8
CTDNEP1-208ENST00000573600 LOC100506127A0A0U1RQW1 187 aa26.28■■□□□ 1.8
CTDNEP1-208ENST00000573600 IQCJ-SCHIP1C9J366 451 aaPredicted RBP26.28■■□□□ 1.8
CTDNEP1-208ENST00000573600 PLPP3O14495 311 aa26.28■■□□□ 1.8
CTDNEP1-208ENST00000573600 SNPHO15079 494 aa26.28■■□□□ 1.8
CTDNEP1-208ENST00000573600 SNX4O95219 450 aa26.28■■□□□ 1.8
CTDNEP1-208ENST00000573600 GTF2E2P29084 291 aaKnown RBP26.28■■□□□ 1.8
CTDNEP1-208ENST00000573600 IDUAP35475 653 aa26.28■■□□□ 1.8
CTDNEP1-208ENST00000573600 DIO1P49895 249 aa26.28■■□□□ 1.8
CTDNEP1-208ENST00000573600 GABREP78334 506 aa26.28■■□□□ 1.8
CTDNEP1-208ENST00000573600 GALEQ14376 348 aa26.28■■□□□ 1.8
CTDNEP1-208ENST00000573600 DGUOKQ16854 277 aa26.28■■□□□ 1.8
CTDNEP1-208ENST00000573600 ACER2Q5QJU3 275 aa26.28■■□□□ 1.8
CTDNEP1-208ENST00000573600 C3orf33Q6P1S2 294 aa26.28■■□□□ 1.8
CTDNEP1-208ENST00000573600 KBTBD8Q8NFY9 601 aa26.28■■□□□ 1.8
CTDNEP1-208ENST00000573600 OR10H4Q8NGA5 316 aa26.28■■□□□ 1.8
CTDNEP1-208ENST00000573600 DYNC2LI1Q8TCX1 351 aa26.28■■□□□ 1.8
CTDNEP1-208ENST00000573600 ADAMTS17Q8TE56 1095 aa26.28■■□□□ 1.8
CTDNEP1-208ENST00000573600 UFD1Q92890 307 aa26.28■■□□□ 1.8
CTDNEP1-208ENST00000573600 ALG8Q9BVK2 526 aa26.28■■□□□ 1.8
CTDNEP1-208ENST00000573600 ASB6Q9NWX5 421 aa26.28■■□□□ 1.8
CTDNEP1-208ENST00000573600 MOKQ9UQ07 419 aa26.28■■□□□ 1.8
CTDNEP1-208ENST00000573600 C11orf98E9PRG8 122 aa26.27■■□□□ 1.8
CTDNEP1-208ENST00000573600 AKAP8O43823 692 aaKnown RBP26.27■■□□□ 1.8
CTDNEP1-208ENST00000573600 SERPINI2O75830 405 aa26.27■■□□□ 1.8
CTDNEP1-208ENST00000573600 CSRP1P21291 193 aaKnown RBP26.27■■□□□ 1.8
CTDNEP1-208ENST00000573600 ATP1A4Q13733 1029 aa26.27■■□□□ 1.8
CTDNEP1-208ENST00000573600 LIPKQ5VXJ0 399 aa26.27■■□□□ 1.8
CTDNEP1-208ENST00000573600 ZNF322Q6U7Q0 402 aaPredicted RBP26.27■■□□□ 1.8
CTDNEP1-208ENST00000573600 ZNF417Q8TAU3 575 aa26.27■■□□□ 1.8
CTDNEP1-208ENST00000573600 TM9SF4Q92544 642 aa26.27■■□□□ 1.8
CTDNEP1-208ENST00000573600 ARL5BQ96KC2 179 aa26.27■■□□□ 1.8
CTDNEP1-208ENST00000573600 ZNF587Q96SQ5 575 aaPredicted RBP26.27■■□□□ 1.8
CTDNEP1-208ENST00000573600 CNN2Q99439 309 aaKnown RBP26.27■■□□□ 1.8
CTDNEP1-208ENST00000573600 DCSTAMPQ9H295 470 aa26.27■■□□□ 1.8
CTDNEP1-208ENST00000573600 PROK2Q9HC23 129 aa26.27■■□□□ 1.8
CTDNEP1-208ENST00000573600 STUB1Q9UNE7 303 aa26.27■■□□□ 1.8
CTDNEP1-208ENST00000573600 MRPS18BQ9Y676 258 aaKnown RBP26.27■■□□□ 1.8
CTDNEP1-208ENST00000573600 KNTC1P50748 2209 aa26.27■■□□□ 1.8
CTDNEP1-208ENST00000573600 GLCEO94923 617 aa26.26■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms