RNA–Protein interactions for RNA: ENST00000571995.5

RAB40B-206, Transcript of RAB40B, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB40B, Length 3,859 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-206ENST00000571995 MLC1Q15049 377 aa14.84□□□□□ -0.03
RAB40B-206ENST00000571995 PIAS4Q8N2W9 510 aaPredicted RBP14.84□□□□□ -0.03
RAB40B-206ENST00000571995 KTI12Q96EK9 354 aaPredicted RBP14.84□□□□□ -0.03
RAB40B-206ENST00000571995 OR1F2PQ96R84 312 aa14.84□□□□□ -0.03
RAB40B-206ENST00000571995 CMKLR1Q99788 373 aa14.84□□□□□ -0.03
RAB40B-206ENST00000571995 CMC2Q9NRP2 79 aa14.84□□□□□ -0.03
RAB40B-206ENST00000571995 REV3LO60673 3130 aa14.84□□□□□ -0.03
RAB40B-206ENST00000571995 DENND4CQ5VZ89 1909 aa14.83□□□□□ -0.03
RAB40B-206ENST00000571995 HEATR5AQ86XA9 2040 aa14.83□□□□□ -0.03
RAB40B-206ENST00000571995 A0A087WV48 116 aa14.83□□□□□ -0.03
RAB40B-206ENST00000571995 AKR7A2O43488 359 aa14.83□□□□□ -0.03
RAB40B-206ENST00000571995 CD27P26842 260 aa14.83□□□□□ -0.03
RAB40B-206ENST00000571995 PITPNBP48739 271 aa14.83□□□□□ -0.03
RAB40B-206ENST00000571995 EEF1A1P68104 462 aaKnown RBP14.83□□□□□ -0.03
RAB40B-206ENST00000571995 POU3F1Q03052 451 aaPredicted RBP14.83□□□□□ -0.03
RAB40B-206ENST00000571995 TPBGQ13641 420 aa14.83□□□□□ -0.03
RAB40B-206ENST00000571995 TCTE1Q5JU00 501 aa14.83□□□□□ -0.03
RAB40B-206ENST00000571995 OR8H3Q8N146 312 aa14.83□□□□□ -0.03
RAB40B-206ENST00000571995 FKBP14Q9NWM8 211 aa14.83□□□□□ -0.03
RAB40B-206ENST00000571995 ZNF69Q9UC07 566 aa14.83□□□□□ -0.03
RAB40B-206ENST00000571995 RCE1Q9Y256 329 aa14.83□□□□□ -0.03
RAB40B-206ENST00000571995 B4DXG7 233 aa14.83□□□□□ -0.04
RAB40B-206ENST00000571995 MASP2O00187 686 aa14.83□□□□□ -0.04
RAB40B-206ENST00000571995 FRKP42685 505 aaPredicted RBP14.83□□□□□ -0.04
RAB40B-206ENST00000571995 HTR3AP46098 478 aa14.83□□□□□ -0.04
RAB40B-206ENST00000571995 SIRPAP78324 504 aa14.83□□□□□ -0.04
RAB40B-206ENST00000571995 TMEM69Q5SWH9 247 aa14.83□□□□□ -0.04
RAB40B-206ENST00000571995 ASCC1Q8N9N2 400 aaKnown RBP14.83□□□□□ -0.04
RAB40B-206ENST00000571995 OR4K17Q8NGC6 315 aa14.83□□□□□ -0.04
RAB40B-206ENST00000571995 AUNIPQ9H7T9 357 aa14.83□□□□□ -0.04
RAB40B-206ENST00000571995 FBXL3Q9UKT7 428 aa14.83□□□□□ -0.04
RAB40B-206ENST00000571995 TRBV11-1A0A0K0K1C0 115 aa14.83□□□□□ -0.04
RAB40B-206ENST00000571995 TRDV1A0A1B0GX56 115 aa14.83□□□□□ -0.04
RAB40B-206ENST00000571995 OR6C68A6NDL8 312 aa14.83□□□□□ -0.04
RAB40B-206ENST00000571995 NGFRP08138 427 aa14.83□□□□□ -0.04
RAB40B-206ENST00000571995 VASH1Q7L8A9 365 aaPredicted RBP14.83□□□□□ -0.04
RAB40B-206ENST00000571995 GPALPP1Q8IXQ4 340 aa14.83□□□□□ -0.04
RAB40B-206ENST00000571995 RBM12BQ8IXT5 1001 aaKnown RBP14.83□□□□□ -0.04
RAB40B-206ENST00000571995 HLA-CQ95604 372 aa14.83□□□□□ -0.04
RAB40B-206ENST00000571995 PPP1R14AQ96A00 147 aa14.83□□□□□ -0.04
RAB40B-206ENST00000571995 PHF7Q9BWX1 381 aaPredicted RBP14.83□□□□□ -0.04
RAB40B-206ENST00000571995 LYRM4Q9HD34 91 aa14.83□□□□□ -0.04
RAB40B-206ENST00000571995 FLVCR2Q9UPI3 526 aa14.83□□□□□ -0.04
RAB40B-206ENST00000571995 TMEM184BQ9Y519 407 aaPredicted RBP14.83□□□□□ -0.04
RAB40B-206ENST00000571995 PCDHGB7Q9Y5F8 929 aa14.83□□□□□ -0.04
RAB40B-206ENST00000571995 V9GYH0 126 aa14.83□□□□□ -0.04
RAB40B-206ENST00000571995 ARRDC5A6NEK1 342 aa14.82□□□□□ -0.04
RAB40B-206ENST00000571995 LANCL1O43813 399 aa14.82□□□□□ -0.04
RAB40B-206ENST00000571995 SPOCK1Q08629 439 aa14.82□□□□□ -0.04
RAB40B-206ENST00000571995 SGCAQ16586 387 aa14.82□□□□□ -0.04
RAB40B-206ENST00000571995 IL17RDQ8NFM7 739 aa14.82□□□□□ -0.04
RAB40B-206ENST00000571995 SLC2A12Q8TD20 617 aa14.82□□□□□ -0.04
RAB40B-206ENST00000571995 TNFAIP8L1Q8WVP5 186 aa14.82□□□□□ -0.04
RAB40B-206ENST00000571995 WDR77Q9BQA1 342 aaPredicted RBP14.82□□□□□ -0.04
RAB40B-206ENST00000571995 PRSS27Q9BQR3 290 aa14.82□□□□□ -0.04
RAB40B-206ENST00000571995 MED29Q9NX70 200 aa14.82□□□□□ -0.04
RAB40B-206ENST00000571995 LSM2Q9Y333 95 aaKnown RBP14.82□□□□□ -0.04
RAB40B-206ENST00000571995 DSPPQ9NZW4 1301 aa14.82□□□□□ -0.04
RAB40B-206ENST00000571995 FREM3P0C091 2139 aa14.82□□□□□ -0.04
RAB40B-206ENST00000571995 GDF9O60383 454 aa14.82□□□□□ -0.04
RAB40B-206ENST00000571995 AK1P00568 194 aa14.82□□□□□ -0.04
RAB40B-206ENST00000571995 WNT1P04628 370 aa14.82□□□□□ -0.04
RAB40B-206ENST00000571995 HSD11B2P80365 405 aa14.82□□□□□ -0.04
RAB40B-206ENST00000571995 ZNF595Q8IYB9 648 aa14.82□□□□□ -0.04
RAB40B-206ENST00000571995 SPACA5Q96QH8 159 aa14.82□□□□□ -0.04
RAB40B-206ENST00000571995 KCNK15Q9H427 330 aa14.82□□□□□ -0.04
RAB40B-206ENST00000571995 MTCH2Q9Y6C9 303 aa14.82□□□□□ -0.04
RAB40B-206ENST00000571995 FANCMQ8IYD8 2048 aa14.82□□□□□ -0.04
RAB40B-206ENST00000571995 IGHV1OR15-9A0A0B4J2B8 117 aa14.82□□□□□ -0.04
RAB40B-206ENST00000571995 TBX19O60806 448 aa14.82□□□□□ -0.04
RAB40B-206ENST00000571995 YES1P07947 543 aa14.82□□□□□ -0.04
RAB40B-206ENST00000571995 CCNOP22674 350 aa14.82□□□□□ -0.04
RAB40B-206ENST00000571995 TSFMP43897 325 aaKnown RBP14.82□□□□□ -0.04
RAB40B-206ENST00000571995 EMP2P54851 167 aa14.82□□□□□ -0.04
RAB40B-206ENST00000571995 NKPD1Q17RQ9 610 aa14.82□□□□□ -0.04
RAB40B-206ENST00000571995 WDR45BQ5MNZ6 344 aa14.82□□□□□ -0.04
RAB40B-206ENST00000571995 NPSR1Q6W5P4 371 aa14.82□□□□□ -0.04
RAB40B-206ENST00000571995 GPBAR1Q8TDU6 330 aa14.82□□□□□ -0.04
RAB40B-206ENST00000571995 ZNF578Q96N58 590 aaPredicted RBP14.82□□□□□ -0.04
RAB40B-206ENST00000571995 ATF6BQ99941 703 aa14.82□□□□□ -0.04
RAB40B-206ENST00000571995 TAS2R10Q9NYW0 307 aa14.82□□□□□ -0.04
RAB40B-206ENST00000571995 AKAP6Q13023 2319 aa14.82□□□□□ -0.04
RAB40B-206ENST00000571995 TACSTD2P09758 323 aa14.81□□□□□ -0.04
RAB40B-206ENST00000571995 UBE2MP61081 183 aaKnown RBP14.81□□□□□ -0.04
RAB40B-206ENST00000571995 KIAA1958Q8N8K9 716 aa14.81□□□□□ -0.04
RAB40B-206ENST00000571995 DNAJA4Q8WW22 397 aaPredicted RBP14.81□□□□□ -0.04
RAB40B-206ENST00000571995 OR5B2Q96R09 309 aa14.81□□□□□ -0.04
RAB40B-206ENST00000571995 LPAR4Q99677 370 aa14.81□□□□□ -0.04
RAB40B-206ENST00000571995 ZC4H2Q9NQZ6 224 aa14.81□□□□□ -0.04
RAB40B-206ENST00000571995 NCDNQ9UBB6 729 aa14.81□□□□□ -0.04
RAB40B-206ENST00000571995 ACAD8Q9UKU7 415 aa14.81□□□□□ -0.04
RAB40B-206ENST00000571995 TEX51A0A1B0GUA7 166 aa14.81□□□□□ -0.04
RAB40B-206ENST00000571995 TLCD2A6NGC4 264 aa14.81□□□□□ -0.04
RAB40B-206ENST00000571995 ZNF879B4DU55 563 aa14.81□□□□□ -0.04
RAB40B-206ENST00000571995 ITGA10O75578 1167 aa14.81□□□□□ -0.04
RAB40B-206ENST00000571995 OTX2P32243 289 aa14.81□□□□□ -0.04
RAB40B-206ENST00000571995 RFX2P48378 723 aa14.81□□□□□ -0.04
RAB40B-206ENST00000571995 ZNF81P51508 661 aa14.81□□□□□ -0.04
RAB40B-206ENST00000571995 C14orf28Q4W4Y0 310 aa14.81□□□□□ -0.04
RAB40B-206ENST00000571995 LIPNQ5VXI9 398 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms