RNA–Protein interactions for RNA: ENST00000569916.1

CNOT1-220, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-220ENST00000569916 CBLP22681 906 aa11.45□□□□□ -0.58
CNOT1-220ENST00000569916 MPGP29372 298 aa11.45□□□□□ -0.58
CNOT1-220ENST00000569916 LSP1P33241 339 aa11.45□□□□□ -0.58
CNOT1-220ENST00000569916 LGALS3BPQ08380 585 aa11.45□□□□□ -0.58
CNOT1-220ENST00000569916 MFSD13AQ14CX5 517 aa11.45□□□□□ -0.58
CNOT1-220ENST00000569916 OR7E24Q6IFN5 339 aa11.45□□□□□ -0.58
CNOT1-220ENST00000569916 ADAM5Q6NVV9 412 aa11.45□□□□□ -0.58
CNOT1-220ENST00000569916 C8orf82Q6P1X6 216 aaPredicted RBP11.45□□□□□ -0.58
CNOT1-220ENST00000569916 NIPAL3Q6P499 406 aa11.45□□□□□ -0.58
CNOT1-220ENST00000569916 H1FNTQ75WM6 255 aaPredicted RBP11.45□□□□□ -0.58
CNOT1-220ENST00000569916 ARPINQ7Z6K5 226 aa11.45□□□□□ -0.58
CNOT1-220ENST00000569916 TGIF2LYQ8IUE0 185 aa11.45□□□□□ -0.58
CNOT1-220ENST00000569916 KRTAP1-3Q8IUG1 177 aa11.45□□□□□ -0.58
CNOT1-220ENST00000569916 SLC15A3Q8IY34 581 aa11.45□□□□□ -0.58
CNOT1-220ENST00000569916 MICU2Q8IYU8 434 aa11.45□□□□□ -0.58
CNOT1-220ENST00000569916 C1orf162Q8NEQ5 155 aaPredicted RBP11.45□□□□□ -0.58
CNOT1-220ENST00000569916 OR2T12Q8NG77 320 aa11.45□□□□□ -0.58
CNOT1-220ENST00000569916 OR52N5Q8NH56 324 aa11.45□□□□□ -0.58
CNOT1-220ENST00000569916 LILRB1Q8NHL6 650 aaPredicted RBP11.45□□□□□ -0.58
CNOT1-220ENST00000569916 AKAP1Q92667 903 aaKnown RBP eCLIP11.45□□□□□ -0.58
CNOT1-220ENST00000569916 PROX1Q92786 737 aa11.45□□□□□ -0.58
CNOT1-220ENST00000569916 PIGTQ969N2 578 aa11.45□□□□□ -0.58
CNOT1-220ENST00000569916 MUCL1Q96DR8 90 aa11.45□□□□□ -0.58
CNOT1-220ENST00000569916 OXGR1Q96P68 337 aa11.45□□□□□ -0.58
CNOT1-220ENST00000569916 MOGAT1Q96PD6 335 aa11.45□□□□□ -0.58
CNOT1-220ENST00000569916 ALKBH3Q96Q83 286 aaPredicted RBP11.45□□□□□ -0.58
CNOT1-220ENST00000569916 CCL19Q99731 98 aa11.45□□□□□ -0.58
CNOT1-220ENST00000569916 FAM107BQ9H098 131 aa11.45□□□□□ -0.58
CNOT1-220ENST00000569916 GMPR2Q9P2T1 348 aaKnown RBP11.45□□□□□ -0.58
CNOT1-220ENST00000569916 RCE1Q9Y256 329 aa11.45□□□□□ -0.58
CNOT1-220ENST00000569916 SH3GLB1Q9Y371 365 aa11.45□□□□□ -0.58
CNOT1-220ENST00000569916 CORINQ9Y5Q5 1042 aa11.45□□□□□ -0.58
CNOT1-220ENST00000569916 ITPR3Q14573 2671 aa11.45□□□□□ -0.58
CNOT1-220ENST00000569916 ELOVL7A1L3X0 281 aa11.44□□□□□ -0.58
CNOT1-220ENST00000569916 LRRN3E7EW58 273 aa11.44□□□□□ -0.58
CNOT1-220ENST00000569916 TRAF3IP2O43734 574 aaPredicted RBP11.44□□□□□ -0.58
CNOT1-220ENST00000569916 SNX3O60493 162 aa11.44□□□□□ -0.58
CNOT1-220ENST00000569916 ZNF432O94892 652 aa11.44□□□□□ -0.58
CNOT1-220ENST00000569916 ZNF43P17038 809 aa11.44□□□□□ -0.58
CNOT1-220ENST00000569916 KDELR2P33947 212 aa11.44□□□□□ -0.58
CNOT1-220ENST00000569916 GYS2P54840 703 aa11.44□□□□□ -0.58
CNOT1-220ENST00000569916 CLDN17P56750 224 aa11.44□□□□□ -0.58
CNOT1-220ENST00000569916 SLC25A3Q00325 362 aa11.44□□□□□ -0.58
CNOT1-220ENST00000569916 LRRC23Q53EV4 343 aaPredicted RBP11.44□□□□□ -0.58
CNOT1-220ENST00000569916 LINGO2Q7L985 606 aa11.44□□□□□ -0.58
CNOT1-220ENST00000569916 CARM1Q86X55 608 aa11.44□□□□□ -0.58
CNOT1-220ENST00000569916 C17orf78Q8N4C9 275 aa11.44□□□□□ -0.58
CNOT1-220ENST00000569916 ZNF611Q8N823 705 aa11.44□□□□□ -0.58
CNOT1-220ENST00000569916 SCAIQ8N9R8 606 aa11.44□□□□□ -0.58
CNOT1-220ENST00000569916 WDR31Q8NA23 367 aa11.44□□□□□ -0.58
CNOT1-220ENST00000569916 KBTBD8Q8NFY9 601 aa11.44□□□□□ -0.58
CNOT1-220ENST00000569916 PRSS27Q9BQR3 290 aa11.44□□□□□ -0.58
CNOT1-220ENST00000569916 ZNF426Q9BUY5 554 aa11.44□□□□□ -0.58
CNOT1-220ENST00000569916 ASPNQ9BXN1 380 aa11.44□□□□□ -0.58
CNOT1-220ENST00000569916 LINC00470Q9BZP3 86 aa11.44□□□□□ -0.58
CNOT1-220ENST00000569916 NSRP1Q9H0G5 558 aaKnown RBP11.44□□□□□ -0.58
CNOT1-220ENST00000569916 SLC17A5Q9NRA2 495 aa11.44□□□□□ -0.58
CNOT1-220ENST00000569916 BAG5Q9UL15 447 aa11.44□□□□□ -0.58
CNOT1-220ENST00000569916 SLC7A7Q9UM01 511 aa11.44□□□□□ -0.58
CNOT1-220ENST00000569916 AP3M1Q9Y2T2 418 aa11.44□□□□□ -0.58
CNOT1-220ENST00000569916 TEP1Q99973 2627 aaKnown RBP11.44□□□□□ -0.58
CNOT1-220ENST00000569916 ZNF469Q96JG9 3925 aaPredicted RBP11.44□□□□□ -0.58
CNOT1-220ENST00000569916 LOC102725191A0A1B0GVB3 256 aa11.43□□□□□ -0.58
CNOT1-220ENST00000569916 OR6C65A6NJZ3 312 aa11.43□□□□□ -0.58
CNOT1-220ENST00000569916 MS4A18H0YCH9 400 aa11.43□□□□□ -0.58
CNOT1-220ENST00000569916 NME4O00746 187 aa11.43□□□□□ -0.58
CNOT1-220ENST00000569916 UPK3AO75631 287 aa11.43□□□□□ -0.58
CNOT1-220ENST00000569916 HPRP00739 348 aa11.43□□□□□ -0.58
CNOT1-220ENST00000569916 MT-ATP6P00846 226 aa11.43□□□□□ -0.58
CNOT1-220ENST00000569916 HLA-DOBP13765 273 aa11.43□□□□□ -0.58
CNOT1-220ENST00000569916 NQO1P15559 274 aaKnown RBP11.43□□□□□ -0.58
CNOT1-220ENST00000569916 HOXC12P31275 282 aa11.43□□□□□ -0.58
CNOT1-220ENST00000569916 NUDT2P50583 147 aa11.43□□□□□ -0.58
CNOT1-220ENST00000569916 SLC7A2P52569 658 aa11.43□□□□□ -0.58
CNOT1-220ENST00000569916 ADAM8P78325 824 aa11.43□□□□□ -0.58
CNOT1-220ENST00000569916 TGFBR3Q03167 851 aa11.43□□□□□ -0.58
CNOT1-220ENST00000569916 LIPEQ05469 1076 aa11.43□□□□□ -0.58
CNOT1-220ENST00000569916 MS4A18Q3C1V0 323 aa11.43□□□□□ -0.58
CNOT1-220ENST00000569916 ZNF672Q499Z4 452 aaPredicted RBP11.43□□□□□ -0.58
CNOT1-220ENST00000569916 CYBRD1Q53TN4 286 aa11.43□□□□□ -0.58
CNOT1-220ENST00000569916 HACD2Q6Y1H2 254 aa11.43□□□□□ -0.58
CNOT1-220ENST00000569916 ABHD12BQ7Z5M8 362 aaPredicted RBP11.43□□□□□ -0.58
CNOT1-220ENST00000569916 WFDC11Q8NEX6 87 aa11.43□□□□□ -0.58
CNOT1-220ENST00000569916 NEUROG1Q92886 237 aa11.43□□□□□ -0.58
CNOT1-220ENST00000569916 BOD1Q96IK1 185 aa11.43□□□□□ -0.58
CNOT1-220ENST00000569916 MPP4Q96JB8 637 aa11.43□□□□□ -0.58
CNOT1-220ENST00000569916 HOPXQ9BPY8 73 aaPredicted RBP11.43□□□□□ -0.58
CNOT1-220ENST00000569916 TMUB1Q9BVT8 246 aa11.43□□□□□ -0.58
CNOT1-220ENST00000569916 EFCAB1Q9HAE3 211 aa11.43□□□□□ -0.58
CNOT1-220ENST00000569916 MRPL39Q9NYK5 338 aaKnown RBP11.43□□□□□ -0.58
CNOT1-220ENST00000569916 AMDHD2Q9Y303 409 aa11.43□□□□□ -0.58
CNOT1-220ENST00000569916 VPS13CQ709C8 3753 aa11.42□□□□□ -0.58
CNOT1-220ENST00000569916 GMNCA6NCL1 334 aa11.42□□□□□ -0.58
CNOT1-220ENST00000569916 SHISA9B4DS77 424 aa11.42□□□□□ -0.58
CNOT1-220ENST00000569916 ZNF587BE7ETH6 402 aa11.42□□□□□ -0.58
CNOT1-220ENST00000569916 ABCD4O14678 606 aa11.42□□□□□ -0.58
CNOT1-220ENST00000569916 SHOX2O60902 331 aaPredicted RBP11.42□□□□□ -0.58
CNOT1-220ENST00000569916 SMPD2O60906 423 aa11.42□□□□□ -0.58
CNOT1-220ENST00000569916 KRT33AO76009 404 aa11.42□□□□□ -0.58
CNOT1-220ENST00000569916 IFNA14P01570 189 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms