RNA–Protein interactions for RNA: ENST00000569569.5

HERPUD1-218, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 1,125 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-218ENST00000569569 OR1E2P47887 323 aa12.18□□□□□ -0.46
HERPUD1-218ENST00000569569 GSK3BP49841 420 aa12.18□□□□□ -0.46
HERPUD1-218ENST00000569569 NR1H2P55055 460 aa12.18□□□□□ -0.46
HERPUD1-218ENST00000569569 TAS2R41P59536 307 aa12.18□□□□□ -0.46
HERPUD1-218ENST00000569569 TIMM23BQ5SRD1 257 aa12.18□□□□□ -0.46
HERPUD1-218ENST00000569569 TSPO2Q5TGU0 170 aa12.18□□□□□ -0.46
HERPUD1-218ENST00000569569 OR7E24Q6IFN5 339 aa12.18□□□□□ -0.46
HERPUD1-218ENST00000569569 WDR88Q6ZMY6 472 aa12.18□□□□□ -0.46
HERPUD1-218ENST00000569569 DEF8Q6ZN54 512 aa12.18□□□□□ -0.46
HERPUD1-218ENST00000569569 TSPYL5Q86VY4 417 aaPredicted RBP12.18□□□□□ -0.46
HERPUD1-218ENST00000569569 C10orf53Q8N6V4 93 aa12.18□□□□□ -0.46
HERPUD1-218ENST00000569569 SCAIQ8N9R8 606 aa12.18□□□□□ -0.46
HERPUD1-218ENST00000569569 MUCL1Q96DR8 90 aa12.18□□□□□ -0.46
HERPUD1-218ENST00000569569 SLC41A3Q96GZ6 507 aa12.18□□□□□ -0.46
HERPUD1-218ENST00000569569 TPD52L3Q96J77 140 aa12.18□□□□□ -0.46
HERPUD1-218ENST00000569569 ASPNQ9BXN1 380 aa12.18□□□□□ -0.46
HERPUD1-218ENST00000569569 SLCO5A1Q9H2Y9 848 aa12.18□□□□□ -0.46
HERPUD1-218ENST00000569569 SPAG4Q9NPE6 437 aa12.18□□□□□ -0.46
HERPUD1-218ENST00000569569 SLC7A10Q9NS82 523 aa12.18□□□□□ -0.46
HERPUD1-218ENST00000569569 SEC14L4Q9UDX3 406 aa12.18□□□□□ -0.46
HERPUD1-218ENST00000569569 OR6C65A6NJZ3 312 aa12.17□□□□□ -0.46
HERPUD1-218ENST00000569569 MS4A18H0YCH9 400 aa12.17□□□□□ -0.46
HERPUD1-218ENST00000569569 PDLIM1O00151 329 aa12.17□□□□□ -0.46
HERPUD1-218ENST00000569569 SHOX2O60902 331 aaPredicted RBP12.17□□□□□ -0.46
HERPUD1-218ENST00000569569 RAD51DO75771 328 aa12.17□□□□□ -0.46
HERPUD1-218ENST00000569569 OR5F1O95221 314 aa12.17□□□□□ -0.46
HERPUD1-218ENST00000569569 ITGA5P08648 1049 aa12.17□□□□□ -0.46
HERPUD1-218ENST00000569569 NQO1P15559 274 aaKnown RBP12.17□□□□□ -0.46
HERPUD1-218ENST00000569569 PTNP21246 168 aa12.17□□□□□ -0.46
HERPUD1-218ENST00000569569 DNASE1P24855 282 aa12.17□□□□□ -0.46
HERPUD1-218ENST00000569569 IST1P53990 364 aa12.17□□□□□ -0.46
HERPUD1-218ENST00000569569 TGFBR3Q03167 851 aa12.17□□□□□ -0.46
HERPUD1-218ENST00000569569 C1DQ13901 141 aaKnown RBP12.17□□□□□ -0.46
HERPUD1-218ENST00000569569 STK11Q15831 433 aa12.17□□□□□ -0.46
HERPUD1-218ENST00000569569 MS4A18Q3C1V0 323 aa12.17□□□□□ -0.46
HERPUD1-218ENST00000569569 GKAP1Q5VSY0 366 aaPredicted RBP12.17□□□□□ -0.46
HERPUD1-218ENST00000569569 ALKBH2Q6NS38 261 aa12.17□□□□□ -0.46
HERPUD1-218ENST00000569569 NIPAL3Q6P499 406 aa12.17□□□□□ -0.46
HERPUD1-218ENST00000569569 PAMR1Q6UXH9 720 aa12.17□□□□□ -0.46
HERPUD1-218ENST00000569569 CBLL1Q75N03 491 aa12.17□□□□□ -0.46
HERPUD1-218ENST00000569569 ABHD12BQ7Z5M8 362 aaPredicted RBP12.17□□□□□ -0.46
HERPUD1-218ENST00000569569 PLPPR2Q96GM1 343 aa12.17□□□□□ -0.46
HERPUD1-218ENST00000569569 MUS81Q96NY9 551 aa12.17□□□□□ -0.46
HERPUD1-218ENST00000569569 MOGAT1Q96PD6 335 aa12.17□□□□□ -0.46
HERPUD1-218ENST00000569569 KCTD14Q9BQ13 255 aaPredicted RBP12.17□□□□□ -0.46
HERPUD1-218ENST00000569569 PRSS27Q9BQR3 290 aa12.17□□□□□ -0.46
HERPUD1-218ENST00000569569 ZNF426Q9BUY5 554 aa12.17□□□□□ -0.46
HERPUD1-218ENST00000569569 SLC19A3Q9BZV2 496 aa12.17□□□□□ -0.46
HERPUD1-218ENST00000569569 FAM53CQ9NYF3 392 aa12.17□□□□□ -0.46
HERPUD1-218ENST00000569569 MRPL39Q9NYK5 338 aaKnown RBP12.17□□□□□ -0.46
HERPUD1-218ENST00000569569 B3GAT1Q9P2W7 334 aa12.17□□□□□ -0.46
HERPUD1-218ENST00000569569 TAGLN3Q9UI15 199 aa12.17□□□□□ -0.46
HERPUD1-218ENST00000569569 RIMS3Q9UJD0 308 aa12.17□□□□□ -0.46
HERPUD1-218ENST00000569569 PLEKHA6Q9Y2H5 1048 aa12.17□□□□□ -0.46
HERPUD1-218ENST00000569569 PRRC2AP48634 2157 aaKnown RBP12.17□□□□□ -0.46
HERPUD1-218ENST00000569569 OR5H1A6NKK0 313 aa12.16□□□□□ -0.46
HERPUD1-218ENST00000569569 LRRN3E7EW58 273 aa12.16□□□□□ -0.46
HERPUD1-218ENST00000569569 KRT33AO76009 404 aa12.16□□□□□ -0.46
HERPUD1-218ENST00000569569 FAM107AO95990 144 aa12.16□□□□□ -0.46
HERPUD1-218ENST00000569569 RAF1P04049 648 aa12.16□□□□□ -0.46
HERPUD1-218ENST00000569569 THRBP10828 461 aa12.16□□□□□ -0.46
HERPUD1-218ENST00000569569 MPGP29372 298 aa12.16□□□□□ -0.46
HERPUD1-218ENST00000569569 IFNA8P32881 189 aa12.16□□□□□ -0.46
HERPUD1-218ENST00000569569 SELENOPP49908 381 aa12.16□□□□□ -0.46
HERPUD1-218ENST00000569569 FOXG1P55316 489 aaPredicted RBP12.16□□□□□ -0.46
HERPUD1-218ENST00000569569 CLDN17P56750 224 aa12.16□□□□□ -0.46
HERPUD1-218ENST00000569569 IL1RL1Q01638 556 aa12.16□□□□□ -0.46
HERPUD1-218ENST00000569569 PMS2P3Q13401 168 aa12.16□□□□□ -0.46
HERPUD1-218ENST00000569569 PIN1Q13526 163 aaPredicted RBP12.16□□□□□ -0.46
HERPUD1-218ENST00000569569 KEAP1Q14145 624 aa12.16□□□□□ -0.46
HERPUD1-218ENST00000569569 PPA1Q15181 289 aa12.16□□□□□ -0.46
HERPUD1-218ENST00000569569 GABRA6Q16445 453 aa12.16□□□□□ -0.46
HERPUD1-218ENST00000569569 OR5J2Q8NH18 312 aa12.16□□□□□ -0.46
HERPUD1-218ENST00000569569 HS3ST6Q96QI5 342 aa12.16□□□□□ -0.46
HERPUD1-218ENST00000569569 AMBRA1Q9C0C7 1298 aa12.16□□□□□ -0.46
HERPUD1-218ENST00000569569 ESRP2Q9H6T0 727 aaKnown RBP12.16□□□□□ -0.46
HERPUD1-218ENST00000569569 CCM2LQ9NUG4 571 aaPredicted RBP12.16□□□□□ -0.46
HERPUD1-218ENST00000569569 ARL8BQ9NVJ2 186 aa12.16□□□□□ -0.46
HERPUD1-218ENST00000569569 ADA2Q9NZK5 511 aa12.16□□□□□ -0.46
HERPUD1-218ENST00000569569 RCE1Q9Y256 329 aa12.16□□□□□ -0.46
HERPUD1-218ENST00000569569 MED13LQ71F56 2210 aa12.16□□□□□ -0.46
HERPUD1-218ENST00000569569 OTOGQ6ZRI0 2925 aa12.16□□□□□ -0.46
HERPUD1-218ENST00000569569 PLCE1Q9P212 2302 aa12.15□□□□□ -0.46
HERPUD1-218ENST00000569569 PLPP3O14495 311 aa12.15□□□□□ -0.46
HERPUD1-218ENST00000569569 AKAP8O43823 692 aaKnown RBP12.15□□□□□ -0.46
HERPUD1-218ENST00000569569 ZNF432O94892 652 aa12.15□□□□□ -0.46
HERPUD1-218ENST00000569569 ZNF682O95780 498 aa12.15□□□□□ -0.46
HERPUD1-218ENST00000569569 CH25HO95992 272 aa12.15□□□□□ -0.46
HERPUD1-218ENST00000569569 SERPINA1P01009 418 aa12.15□□□□□ -0.46
HERPUD1-218ENST00000569569 RBM34P42696 430 aaKnown RBP12.15□□□□□ -0.46
HERPUD1-218ENST00000569569 PUDPQ08623 228 aa12.15□□□□□ -0.46
HERPUD1-218ENST00000569569 ST3GAL3Q11203 375 aa12.15□□□□□ -0.46
HERPUD1-218ENST00000569569 ZNF74Q16587 644 aa12.15□□□□□ -0.46
HERPUD1-218ENST00000569569 NCMAPQ5T1S8 102 aa12.15□□□□□ -0.46
HERPUD1-218ENST00000569569 C9orf135Q5VTT2 229 aa12.15□□□□□ -0.46
HERPUD1-218ENST00000569569 GLYATQ6IB77 296 aa12.15□□□□□ -0.46
HERPUD1-218ENST00000569569 PXKQ7Z7A4 578 aa12.15□□□□□ -0.46
HERPUD1-218ENST00000569569 VTCN1Q7Z7D3 282 aa12.15□□□□□ -0.46
HERPUD1-218ENST00000569569 NKAIN4Q8IVV8 208 aa12.15□□□□□ -0.46
HERPUD1-218ENST00000569569 UEVLDQ8IX04 471 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms