RNA–Protein interactions for RNA: ENST00000569236.5

NSMCE1-214, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 2

Gene NSMCE1, Length 1,782 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-214ENST00000569236 H0YC42 278 aa11.26□□□□□ -0.61
NSMCE1-214ENST00000569236 PCMT1P22061 227 aa11.26□□□□□ -0.61
NSMCE1-214ENST00000569236 PCSK6P29122 969 aa11.26□□□□□ -0.61
NSMCE1-214ENST00000569236 SLC6A8P48029 635 aa11.26□□□□□ -0.61
NSMCE1-214ENST00000569236 CLDN20P56880 219 aa11.26□□□□□ -0.61
NSMCE1-214ENST00000569236 RPS3AP61247 264 aaKnown RBP11.26□□□□□ -0.61
NSMCE1-214ENST00000569236 PIN1Q13526 163 aaPredicted RBP11.26□□□□□ -0.61
NSMCE1-214ENST00000569236 LARS2Q15031 903 aaKnown RBP11.26□□□□□ -0.61
NSMCE1-214ENST00000569236 CDSNQ15517 529 aa11.26□□□□□ -0.61
NSMCE1-214ENST00000569236 NPTX1Q15818 432 aa11.26□□□□□ -0.61
NSMCE1-214ENST00000569236 HSPB2Q16082 182 aa11.26□□□□□ -0.61
NSMCE1-214ENST00000569236 MRPL2Q5T653 305 aaKnown RBP11.26□□□□□ -0.61
NSMCE1-214ENST00000569236 C1QTNF12Q5T7M4 302 aa11.26□□□□□ -0.61
NSMCE1-214ENST00000569236 ZNF836Q6ZNA1 936 aa11.26□□□□□ -0.61
NSMCE1-214ENST00000569236 ADGRE4PQ86SQ3 457 aa11.26□□□□□ -0.61
NSMCE1-214ENST00000569236 VRK2Q86Y07 508 aa11.26□□□□□ -0.61
NSMCE1-214ENST00000569236 RHOXF1Q8NHV9 184 aa11.26□□□□□ -0.61
NSMCE1-214ENST00000569236 MBD3L2Q8NHZ7 208 aaPredicted RBP11.26□□□□□ -0.61
NSMCE1-214ENST00000569236 ZNF563Q8TA94 476 aa11.26□□□□□ -0.61
NSMCE1-214ENST00000569236 IPCEF1Q8WWN9 437 aaPredicted RBP11.26□□□□□ -0.61
NSMCE1-214ENST00000569236 ST8SIA1Q92185 356 aa11.26□□□□□ -0.61
NSMCE1-214ENST00000569236 CNOT9Q92600 299 aaKnown RBP11.26□□□□□ -0.61
NSMCE1-214ENST00000569236 MUL1Q969V5 352 aa11.26□□□□□ -0.61
NSMCE1-214ENST00000569236 GTPBP3Q969Y2 492 aaKnown RBP11.26□□□□□ -0.61
NSMCE1-214ENST00000569236 SIGLEC11Q96RL6 698 aa11.26□□□□□ -0.61
NSMCE1-214ENST00000569236 UCN2Q96RP3 112 aa11.26□□□□□ -0.61
NSMCE1-214ENST00000569236 ARMC7Q9H6L4 198 aa11.26□□□□□ -0.61
NSMCE1-214ENST00000569236 TMEM185BQ9H7F4 350 aa11.26□□□□□ -0.61
NSMCE1-214ENST00000569236 RASSF1Q9NS23 344 aa11.26□□□□□ -0.61
NSMCE1-214ENST00000569236 PLCXD1Q9NUJ7 323 aa11.26□□□□□ -0.61
NSMCE1-214ENST00000569236 DNAJB12Q9NXW2 375 aaKnown RBP11.26□□□□□ -0.61
NSMCE1-214ENST00000569236 KLF2Q9Y5W3 355 aaPredicted RBP11.26□□□□□ -0.61
NSMCE1-214ENST00000569236 SETXQ7Z333 2677 aaKnown RBP11.26□□□□□ -0.61
NSMCE1-214ENST00000569236 KIAA1549Q9HCM3 1950 aa11.26□□□□□ -0.61
NSMCE1-214ENST00000569236 CDHR4A6H8M9 788 aa11.26□□□□□ -0.61
NSMCE1-214ENST00000569236 TRIM64BA6NI03 449 aa11.26□□□□□ -0.61
NSMCE1-214ENST00000569236 ENO4A6NNW6 628 aa11.26□□□□□ -0.61
NSMCE1-214ENST00000569236 ZAR1LA6NP61 321 aa11.26□□□□□ -0.61
NSMCE1-214ENST00000569236 PRSS44E7EML9 344 aa11.26□□□□□ -0.61
NSMCE1-214ENST00000569236 EIF1AYO14602 144 aaKnown RBP11.26□□□□□ -0.61
NSMCE1-214ENST00000569236 OR10H3O60404 316 aa11.26□□□□□ -0.61
NSMCE1-214ENST00000569236 TRMUO75648 421 aaKnown RBP11.26□□□□□ -0.61
NSMCE1-214ENST00000569236 TOXO94900 526 aa11.26□□□□□ -0.61
NSMCE1-214ENST00000569236 THBS1P07996 1170 aa11.26□□□□□ -0.61
NSMCE1-214ENST00000569236 GP1BBP13224 206 aa11.26□□□□□ -0.61
NSMCE1-214ENST00000569236 POU2F1P14859 743 aa11.26□□□□□ -0.61
NSMCE1-214ENST00000569236 GABRB1P18505 474 aa11.26□□□□□ -0.61
NSMCE1-214ENST00000569236 UGT2B15P54855 530 aa11.26□□□□□ -0.61
NSMCE1-214ENST00000569236 CLDN15P56746 228 aa11.26□□□□□ -0.61
NSMCE1-214ENST00000569236 PLAURQ03405 335 aa11.26□□□□□ -0.61
NSMCE1-214ENST00000569236 PTGES3Q15185 160 aaKnown RBP11.26□□□□□ -0.61
NSMCE1-214ENST00000569236 SGCBQ16585 318 aa11.26□□□□□ -0.61
NSMCE1-214ENST00000569236 SLC25A53Q5H9E4 307 aa11.26□□□□□ -0.61
NSMCE1-214ENST00000569236 PGBD2Q6P3X8 592 aa11.26□□□□□ -0.61
NSMCE1-214ENST00000569236 GGNQ86UU5 652 aa11.26□□□□□ -0.61
NSMCE1-214ENST00000569236 GRAMD2AQ8IUY3 354 aa11.26□□□□□ -0.61
NSMCE1-214ENST00000569236 ERI1Q8IV48 349 aaKnown RBP11.26□□□□□ -0.61
NSMCE1-214ENST00000569236 P3H2Q8IVL5 708 aa11.26□□□□□ -0.61
NSMCE1-214ENST00000569236 LILRB4Q8NHJ6 448 aa11.26□□□□□ -0.61
NSMCE1-214ENST00000569236 WNT2BQ93097 391 aa11.26□□□□□ -0.61
NSMCE1-214ENST00000569236 UBE2FQ969M7 185 aa11.26□□□□□ -0.61
NSMCE1-214ENST00000569236 TM9SF2Q99805 663 aa11.26□□□□□ -0.61
NSMCE1-214ENST00000569236 FNDC11Q9BVV2 318 aa11.26□□□□□ -0.61
NSMCE1-214ENST00000569236 CLCF1Q9UBD9 225 aa11.26□□□□□ -0.61
NSMCE1-214ENST00000569236 AASSQ9UDR5 926 aa11.26□□□□□ -0.61
NSMCE1-214ENST00000569236 SLC13A4Q9UKG4 626 aa11.26□□□□□ -0.61
NSMCE1-214ENST00000569236 ZNF443Q9Y2A4 671 aaPredicted RBP11.26□□□□□ -0.61
NSMCE1-214ENST00000569236 IFT52Q9Y366 437 aa11.26□□□□□ -0.61
NSMCE1-214ENST00000569236 CHST2Q9Y4C5 530 aa11.26□□□□□ -0.61
NSMCE1-214ENST00000569236 CACNA1CQ13936 2221 aa11.25□□□□□ -0.61
NSMCE1-214ENST00000569236 SLC22A20A6NK97 555 aa11.25□□□□□ -0.61
NSMCE1-214ENST00000569236 GJE1A6NN92 205 aa11.25□□□□□ -0.61
NSMCE1-214ENST00000569236 ETV2O00321 342 aaPredicted RBP11.25□□□□□ -0.61
NSMCE1-214ENST00000569236 MPZL2O60487 215 aa11.25□□□□□ -0.61
NSMCE1-214ENST00000569236 FAM20BO75063 409 aa11.25□□□□□ -0.61
NSMCE1-214ENST00000569236 NTN1O95631 604 aa11.25□□□□□ -0.61
NSMCE1-214ENST00000569236 OPN1LWP04000 364 aa11.25□□□□□ -0.61
NSMCE1-214ENST00000569236 OSMP13725 252 aa11.25□□□□□ -0.61
NSMCE1-214ENST00000569236 IL11P20809 199 aa11.25□□□□□ -0.61
NSMCE1-214ENST00000569236 CEACAM8P31997 349 aaPredicted RBP11.25□□□□□ -0.61
NSMCE1-214ENST00000569236 EIF1AXP47813 144 aaKnown RBP11.25□□□□□ -0.61
NSMCE1-214ENST00000569236 IDH2P48735 452 aaKnown RBP11.25□□□□□ -0.61
NSMCE1-214ENST00000569236 CRISP1P54107 249 aa11.25□□□□□ -0.61
NSMCE1-214ENST00000569236 CDC42P60953 191 aa11.25□□□□□ -0.61
NSMCE1-214ENST00000569236 ROR2Q01974 943 aaKnown RBP11.25□□□□□ -0.61
NSMCE1-214ENST00000569236 MVKQ03426 396 aa11.25□□□□□ -0.61
NSMCE1-214ENST00000569236 EMX1Q04741 257 aaPredicted RBP11.25□□□□□ -0.61
NSMCE1-214ENST00000569236 PIGFQ07326 219 aa11.25□□□□□ -0.61
NSMCE1-214ENST00000569236 SELENBP1Q13228 472 aa11.25□□□□□ -0.61
NSMCE1-214ENST00000569236 SMN1Q16637 294 aaKnown RBP11.25□□□□□ -0.61
NSMCE1-214ENST00000569236 ZSWIM7Q19AV6 140 aa11.25□□□□□ -0.61
NSMCE1-214ENST00000569236 PLXDC2Q6UX71 529 aa11.25□□□□□ -0.61
NSMCE1-214ENST00000569236 CD300LDQ6UXZ3 194 aa11.25□□□□□ -0.61
NSMCE1-214ENST00000569236 ESPNLQ6ZVH7 1005 aa11.25□□□□□ -0.61
NSMCE1-214ENST00000569236 PRSS48Q7RTY5 328 aa11.25□□□□□ -0.61
NSMCE1-214ENST00000569236 P4HA3Q7Z4N8 544 aa11.25□□□□□ -0.61
NSMCE1-214ENST00000569236 C9orf106Q8NAJ2 232 aa11.25□□□□□ -0.61
NSMCE1-214ENST00000569236 NAXEQ8NCW5 288 aa11.25□□□□□ -0.61
NSMCE1-214ENST00000569236 ZNF540Q8NDQ6 660 aa11.25□□□□□ -0.61
NSMCE1-214ENST00000569236 ZNF524Q96C55 264 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms