RNA–Protein interactions for RNA: ENST00000564047.1

SPG7-209, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 422 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-209ENST00000564047 ALKBH4Q9NXW9 302 aa11.59□□□□□ -0.55
SPG7-209ENST00000564047 NPIPA1Q9UND3 350 aa11.59□□□□□ -0.55
SPG7-209ENST00000564047 SIGLEC7Q9Y286 467 aa11.59□□□□□ -0.55
SPG7-209ENST00000564047 CORINQ9Y5Q5 1042 aa11.59□□□□□ -0.55
SPG7-209ENST00000564047 SPENQ96T58 3664 aaKnown RBP11.59□□□□□ -0.55
SPG7-209ENST00000564047 CRYBG3Q68DQ2 2970 aa11.58□□□□□ -0.55
SPG7-209ENST00000564047 A0A1W2PNR3 127 aa11.58□□□□□ -0.56
SPG7-209ENST00000564047 ZNF701M0R085 212 aaPredicted RBP11.58□□□□□ -0.56
SPG7-209ENST00000564047 SULT2B1O00204 365 aa11.58□□□□□ -0.56
SPG7-209ENST00000564047 EIF1AYO14602 144 aaKnown RBP11.58□□□□□ -0.56
SPG7-209ENST00000564047 DNPH1O43598 174 aa11.58□□□□□ -0.56
SPG7-209ENST00000564047 SNAP29O95721 258 aa11.58□□□□□ -0.56
SPG7-209ENST00000564047 TP53P04637 393 aaPredicted RBP11.58□□□□□ -0.56
SPG7-209ENST00000564047 HIST1H2ABP04908 130 aa11.58□□□□□ -0.56
SPG7-209ENST00000564047 TSPAN19P0C672 248 aa11.58□□□□□ -0.56
SPG7-209ENST00000564047 CPN1P15169 458 aa11.58□□□□□ -0.56
SPG7-209ENST00000564047 ZNF708P17019 499 aa11.58□□□□□ -0.56
SPG7-209ENST00000564047 GTF2E2P29084 291 aaKnown RBP11.58□□□□□ -0.56
SPG7-209ENST00000564047 GRPRP30550 384 aa11.58□□□□□ -0.56
SPG7-209ENST00000564047 DIO1P49895 249 aa11.58□□□□□ -0.56
SPG7-209ENST00000564047 CLDN18P56856 261 aa11.58□□□□□ -0.56
SPG7-209ENST00000564047 CLDN20P56880 219 aa11.58□□□□□ -0.56
SPG7-209ENST00000564047 OR2B6P58173 313 aa11.58□□□□□ -0.56
SPG7-209ENST00000564047 RPS4XP62701 263 aaKnown RBP11.58□□□□□ -0.56
SPG7-209ENST00000564047 CSNK2A1P68400 391 aaPredicted RBP11.58□□□□□ -0.56
SPG7-209ENST00000564047 SLC35A1P78382 337 aa11.58□□□□□ -0.56
SPG7-209ENST00000564047 LSAMPQ13449 338 aa11.58□□□□□ -0.56
SPG7-209ENST00000564047 IL18R1Q13478 541 aa11.58□□□□□ -0.56
SPG7-209ENST00000564047 FHL1Q13642 323 aa11.58□□□□□ -0.56
SPG7-209ENST00000564047 OR7A5Q15622 319 aa11.58□□□□□ -0.56
SPG7-209ENST00000564047 KRTCAP3Q53RY4 240 aa11.58□□□□□ -0.56
SPG7-209ENST00000564047 ZNF324BQ6AW86 544 aaPredicted RBP11.58□□□□□ -0.56
SPG7-209ENST00000564047 ZNF620Q6ZNG0 422 aa11.58□□□□□ -0.56
SPG7-209ENST00000564047 HIST3H2AQ7L7L0 130 aa11.58□□□□□ -0.56
SPG7-209ENST00000564047 NANOGNBQ7Z5D8 188 aa11.58□□□□□ -0.56
SPG7-209ENST00000564047 SLC43A2Q8N370 569 aa11.58□□□□□ -0.56
SPG7-209ENST00000564047 ZNF786Q8N393 782 aa11.58□□□□□ -0.56
SPG7-209ENST00000564047 FAM26EQ8N5C1 309 aa11.58□□□□□ -0.56
SPG7-209ENST00000564047 MEIOBQ8N635 442 aa11.58□□□□□ -0.56
SPG7-209ENST00000564047 SCAIQ8N9R8 606 aa11.58□□□□□ -0.56
SPG7-209ENST00000564047 OR5J2Q8NH18 312 aa11.58□□□□□ -0.56
SPG7-209ENST00000564047 OR2V1Q8NHB1 315 aa11.58□□□□□ -0.56
SPG7-209ENST00000564047 HIST1H2ACQ93077 130 aa11.58□□□□□ -0.56
SPG7-209ENST00000564047 RELTQ969Z4 430 aa11.58□□□□□ -0.56
SPG7-209ENST00000564047 GPR137Q96N19 417 aa11.58□□□□□ -0.56
SPG7-209ENST00000564047 TNFRSF13CQ96RJ3 184 aa11.58□□□□□ -0.56
SPG7-209ENST00000564047 TIMP4Q99727 224 aa11.58□□□□□ -0.56
SPG7-209ENST00000564047 TSPAN10Q9H1Z9 355 aaPredicted RBP11.58□□□□□ -0.56
SPG7-209ENST00000564047 TOR3AQ9H497 397 aa11.58□□□□□ -0.56
SPG7-209ENST00000564047 MRPL39Q9NYK5 338 aaKnown RBP11.58□□□□□ -0.56
SPG7-209ENST00000564047 IL20Q9NYY1 176 aa11.58□□□□□ -0.56
SPG7-209ENST00000564047 SPRR3Q9UBC9 169 aa11.58□□□□□ -0.56
SPG7-209ENST00000564047 HIF3AQ9Y2N7 669 aa11.58□□□□□ -0.56
SPG7-209ENST00000564047 CDH10Q9Y6N8 788 aa11.58□□□□□ -0.56
SPG7-209ENST00000564047 LRBAP50851 2863 aa11.58□□□□□ -0.56
SPG7-209ENST00000564047 PCNX3Q9H6A9 2034 aa11.58□□□□□ -0.56
SPG7-209ENST00000564047 TRAV27A0A087WT01 109 aa11.57□□□□□ -0.56
SPG7-209ENST00000564047 H3BN98 237 aa11.57□□□□□ -0.56
SPG7-209ENST00000564047 M0R082 166 aa11.57□□□□□ -0.56
SPG7-209ENST00000564047 TNFSF11O14788 317 aa11.57□□□□□ -0.56
SPG7-209ENST00000564047 SEC14L5O43304 696 aa11.57□□□□□ -0.56
SPG7-209ENST00000564047 EIF1BO60739 113 aaKnown RBP11.57□□□□□ -0.56
SPG7-209ENST00000564047 SOX14O95416 240 aa11.57□□□□□ -0.56
SPG7-209ENST00000564047 GNAO1P09471 354 aa11.57□□□□□ -0.56
SPG7-209ENST00000564047 SUCLG1P53597 346 aaKnown RBP11.57□□□□□ -0.56
SPG7-209ENST00000564047 CRISP1P54107 249 aa11.57□□□□□ -0.56
SPG7-209ENST00000564047 CLDN15P56746 228 aa11.57□□□□□ -0.56
SPG7-209ENST00000564047 CARD18P57730 90 aa11.57□□□□□ -0.56
SPG7-209ENST00000564047 RAC3P60763 192 aa11.57□□□□□ -0.56
SPG7-209ENST00000564047 PRPS1P60891 318 aa11.57□□□□□ -0.56
SPG7-209ENST00000564047 RPS3AP61247 264 aaKnown RBP11.57□□□□□ -0.56
SPG7-209ENST00000564047 NPRL3Q12980 569 aa11.57□□□□□ -0.56
SPG7-209ENST00000564047 DYNC1I2Q13409 638 aaKnown RBP11.57□□□□□ -0.56
SPG7-209ENST00000564047 TOP3AQ13472 1001 aaPredicted RBP11.57□□□□□ -0.56
SPG7-209ENST00000564047 SGCBQ16585 318 aa11.57□□□□□ -0.56
SPG7-209ENST00000564047 ZNF239Q16600 458 aaKnown RBP11.57□□□□□ -0.56
SPG7-209ENST00000564047 ZIK1Q3SY52 487 aaPredicted RBP11.57□□□□□ -0.56
SPG7-209ENST00000564047 RBM48Q5RL73 367 aaKnown RBP11.57□□□□□ -0.56
SPG7-209ENST00000564047 HBMQ6B0K9 141 aa11.57□□□□□ -0.56
SPG7-209ENST00000564047 ARHGAP11AQ6P4F7 1023 aa11.57□□□□□ -0.56
SPG7-209ENST00000564047 SMARCD3Q6STE5 483 aa11.57□□□□□ -0.56
SPG7-209ENST00000564047 B3GNT6Q6ZMB0 384 aa11.57□□□□□ -0.56
SPG7-209ENST00000564047 H1FNTQ75WM6 255 aaPredicted RBP11.57□□□□□ -0.56
SPG7-209ENST00000564047 KIF18BQ86Y91 864 aa11.57□□□□□ -0.56
SPG7-209ENST00000564047 UBQLNLQ8IYU4 475 aa11.57□□□□□ -0.56
SPG7-209ENST00000564047 CISD2Q8N5K1 135 aaKnown RBP11.57□□□□□ -0.56
SPG7-209ENST00000564047 ADPRHL1Q8NDY3 354 aa11.57□□□□□ -0.56
SPG7-209ENST00000564047 ZNF555Q8NEP9 628 aa11.57□□□□□ -0.56
SPG7-209ENST00000564047 OR51A7Q8NH64 312 aa11.57□□□□□ -0.56
SPG7-209ENST00000564047 ZNF417Q8TAU3 575 aa11.57□□□□□ -0.56
SPG7-209ENST00000564047 FANK1Q8TC84 345 aa11.57□□□□□ -0.56
SPG7-209ENST00000564047 FAR1Q8WVX9 515 aa11.57□□□□□ -0.56
SPG7-209ENST00000564047 OSTF1Q92882 214 aa11.57□□□□□ -0.56
SPG7-209ENST00000564047 DNAJA3Q96EY1 480 aa11.57□□□□□ -0.56
SPG7-209ENST00000564047 PSMG3-AS1Q96PY0 264 aa11.57□□□□□ -0.56
SPG7-209ENST00000564047 ZNF587Q96SQ5 575 aaPredicted RBP11.57□□□□□ -0.56
SPG7-209ENST00000564047 MBOAT4Q96T53 435 aa11.57□□□□□ -0.56
SPG7-209ENST00000564047 NDEL1Q9GZM8 345 aa11.57□□□□□ -0.56
SPG7-209ENST00000564047 OR52D1Q9H346 318 aa11.57□□□□□ -0.56
SPG7-209ENST00000564047 RIBC2Q9H4K1 309 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms