RNA–Protein interactions for RNA: ENST00000563239.1

UBR1-204, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-204ENST00000563239 A6NNC1 897 aa7.54□□□□□ -1.2
UBR1-204ENST00000563239 DEFB108AA8MXU0 73 aa7.54□□□□□ -1.2
UBR1-204ENST00000563239 PLPP3O14495 311 aa7.54□□□□□ -1.2
UBR1-204ENST00000563239 ARPC2O15144 300 aa7.54□□□□□ -1.2
UBR1-204ENST00000563239 TRAF3IP2O43734 574 aaPredicted RBP7.54□□□□□ -1.2
UBR1-204ENST00000563239 MRPL33O75394 65 aaKnown RBP7.54□□□□□ -1.2
UBR1-204ENST00000563239 ZNF432O94892 652 aa7.54□□□□□ -1.2
UBR1-204ENST00000563239 UBOX5O94941 541 aa7.54□□□□□ -1.2
UBR1-204ENST00000563239 VAMP5O95183 116 aa7.54□□□□□ -1.2
UBR1-204ENST00000563239 CNOT4O95628 575 aaKnown RBP7.54□□□□□ -1.2
UBR1-204ENST00000563239 IGHV3-9P01782 118 aa7.54□□□□□ -1.2
UBR1-204ENST00000563239 THRBP10828 461 aa7.54□□□□□ -1.2
UBR1-204ENST00000563239 HLA-DOBP13765 273 aa7.54□□□□□ -1.2
UBR1-204ENST00000563239 COX5AP20674 150 aa7.54□□□□□ -1.2
UBR1-204ENST00000563239 IGHV1-2P23083 117 aa7.54□□□□□ -1.2
UBR1-204ENST00000563239 LOXP28300 417 aaPredicted RBP7.54□□□□□ -1.2
UBR1-204ENST00000563239 YAP1P46937 504 aaKnown RBP7.54□□□□□ -1.2
UBR1-204ENST00000563239 TAS2R41P59536 307 aa7.54□□□□□ -1.2
UBR1-204ENST00000563239 LGALS3BPQ08380 585 aa7.54□□□□□ -1.2
UBR1-204ENST00000563239 P2RY6Q15077 328 aa7.54□□□□□ -1.2
UBR1-204ENST00000563239 SPATS1Q496A3 300 aa7.54□□□□□ -1.2
UBR1-204ENST00000563239 IFI44LQ53G44 452 aa7.54□□□□□ -1.2
UBR1-204ENST00000563239 SFRP5Q5T4F7 317 aa7.54□□□□□ -1.2
UBR1-204ENST00000563239 TSPO2Q5TGU0 170 aa7.54□□□□□ -1.2
UBR1-204ENST00000563239 FBXW9Q5XUX1 488 aa7.54□□□□□ -1.2
UBR1-204ENST00000563239 TMEM225Q6GV28 225 aa7.54□□□□□ -1.2
UBR1-204ENST00000563239 TTC33Q6PID6 262 aaPredicted RBP7.54□□□□□ -1.2
UBR1-204ENST00000563239 SEZ6L2Q6UXD5 910 aa7.54□□□□□ -1.2
UBR1-204ENST00000563239 LINGO2Q7L985 606 aa7.54□□□□□ -1.2
UBR1-204ENST00000563239 SLC46A3Q7Z3Q1 461 aa7.54□□□□□ -1.2
UBR1-204ENST00000563239 GPAT4Q86UL3 456 aa7.54□□□□□ -1.2
UBR1-204ENST00000563239 STK32CQ86UX6 486 aa7.54□□□□□ -1.2
UBR1-204ENST00000563239 ZNF100Q8IYN0 542 aa7.54□□□□□ -1.2
UBR1-204ENST00000563239 LRRC17Q8N6Y2 441 aa7.54□□□□□ -1.2
UBR1-204ENST00000563239 ZNF433Q8N7K0 673 aaPredicted RBP7.54□□□□□ -1.2
UBR1-204ENST00000563239 SCAIQ8N9R8 606 aa7.54□□□□□ -1.2
UBR1-204ENST00000563239 PFN4Q8NHR9 129 aa7.54□□□□□ -1.2
UBR1-204ENST00000563239 GEMIN6Q8WXD5 167 aaKnown RBP7.54□□□□□ -1.2
UBR1-204ENST00000563239 LZICQ8WZA0 190 aa7.54□□□□□ -1.2
UBR1-204ENST00000563239 ZDHHC16Q969W1 377 aa7.54□□□□□ -1.2
UBR1-204ENST00000563239 APH1AQ96BI3 265 aa7.54□□□□□ -1.2
UBR1-204ENST00000563239 C7orf34Q96L11 122 aa7.54□□□□□ -1.2
UBR1-204ENST00000563239 LURAP1Q96LR2 239 aa7.54□□□□□ -1.2
UBR1-204ENST00000563239 PRRC1Q96M27 445 aa7.54□□□□□ -1.2
UBR1-204ENST00000563239 OXGR1Q96P68 337 aa7.54□□□□□ -1.2
UBR1-204ENST00000563239 EPYCQ99645 322 aa7.54□□□□□ -1.2
UBR1-204ENST00000563239 SLC19A3Q9BZV2 496 aa7.54□□□□□ -1.2
UBR1-204ENST00000563239 ACTR6Q9GZN1 396 aa7.54□□□□□ -1.2
UBR1-204ENST00000563239 FANCFQ9NPI8 374 aa7.54□□□□□ -1.2
UBR1-204ENST00000563239 RASSF1Q9NS23 344 aa7.54□□□□□ -1.2
UBR1-204ENST00000563239 SLC7A10Q9NS82 523 aa7.54□□□□□ -1.2
UBR1-204ENST00000563239 C20orf141Q9NUB4 165 aa7.54□□□□□ -1.2
UBR1-204ENST00000563239 NDE1Q9NXR1 346 aa7.54□□□□□ -1.2
UBR1-204ENST00000563239 MRPL39Q9NYK5 338 aaKnown RBP7.54□□□□□ -1.2
UBR1-204ENST00000563239 TAS2R5Q9NYW4 299 aa7.54□□□□□ -1.2
UBR1-204ENST00000563239 NDUFAF4Q9P032 175 aa7.54□□□□□ -1.2
UBR1-204ENST00000563239 RHCGQ9UBD6 479 aa7.54□□□□□ -1.2
UBR1-204ENST00000563239 MALT1Q9UDY8 824 aa7.54□□□□□ -1.2
UBR1-204ENST00000563239 GPR52Q9Y2T5 361 aa7.54□□□□□ -1.2
UBR1-204ENST00000563239 KPNA4O00629 521 aaPredicted RBP7.53□□□□□ -1.2
UBR1-204ENST00000563239 KLF4O43474 513 aa7.53□□□□□ -1.2
UBR1-204ENST00000563239 PIP5K1CO60331 668 aa7.53□□□□□ -1.2
UBR1-204ENST00000563239 LYZL6O75951 148 aa7.53□□□□□ -1.2
UBR1-204ENST00000563239 CH25HO95992 272 aa7.53□□□□□ -1.2
UBR1-204ENST00000563239 MT-ATP6P00846 226 aa7.53□□□□□ -1.2
UBR1-204ENST00000563239 IGF2P01344 180 aa7.53□□□□□ -1.2
UBR1-204ENST00000563239 MT-ND1P03886 318 aa7.53□□□□□ -1.2
UBR1-204ENST00000563239 HRGP04196 525 aa7.53□□□□□ -1.2
UBR1-204ENST00000563239 IFNW1P05000 195 aa7.53□□□□□ -1.2
UBR1-204ENST00000563239 ITGA5P08648 1049 aa7.53□□□□□ -1.2
UBR1-204ENST00000563239 TSPAN19P0C672 248 aa7.53□□□□□ -1.2
UBR1-204ENST00000563239 ASAH2BP0C7U1 165 aa7.53□□□□□ -1.2
UBR1-204ENST00000563239 ATP6V1B2P21281 511 aa7.53□□□□□ -1.2
UBR1-204ENST00000563239 CRYGSP22914 178 aa7.53□□□□□ -1.2
UBR1-204ENST00000563239 RBM34P42696 430 aaKnown RBP7.53□□□□□ -1.2
UBR1-204ENST00000563239 SELENOPP49908 381 aa7.53□□□□□ -1.2
UBR1-204ENST00000563239 MXRA7P84157 204 aa7.53□□□□□ -1.2
UBR1-204ENST00000563239 VLDLRP98155 873 aa7.53□□□□□ -1.2
UBR1-204ENST00000563239 MS4A2Q01362 244 aa7.53□□□□□ -1.2
UBR1-204ENST00000563239 ITGADQ13349 1161 aa7.53□□□□□ -1.2
UBR1-204ENST00000563239 MFSD13AQ14CX5 517 aa7.53□□□□□ -1.2
UBR1-204ENST00000563239 CASP12Q6UXS9 341 aa7.53□□□□□ -1.2
UBR1-204ENST00000563239 AAED1Q7RTV5 226 aa7.53□□□□□ -1.2
UBR1-204ENST00000563239 OFCC1Q8IZS5 231 aa7.53□□□□□ -1.2
UBR1-204ENST00000563239 PIK3C3Q8NEB9 887 aa7.53□□□□□ -1.2
UBR1-204ENST00000563239 TMEM239Q8WW34 195 aa7.53□□□□□ -1.2
UBR1-204ENST00000563239 LIPHQ8WWY8 451 aa7.53□□□□□ -1.2
UBR1-204ENST00000563239 S100PBPQ96BU1 408 aa7.53□□□□□ -1.2
UBR1-204ENST00000563239 SLC7A6OSQ96CW6 309 aaPredicted RBP7.53□□□□□ -1.2
UBR1-204ENST00000563239 PYURFQ96I23 114 aa7.53□□□□□ -1.2
UBR1-204ENST00000563239 TXNDC15Q96J42 360 aa7.53□□□□□ -1.2
UBR1-204ENST00000563239 CLPTM1LQ96KA5 538 aa7.53□□□□□ -1.2
UBR1-204ENST00000563239 FUZQ9BT04 418 aa7.53□□□□□ -1.2
UBR1-204ENST00000563239 HDHD5Q9BXW7 423 aa7.53□□□□□ -1.2
UBR1-204ENST00000563239 OR10A4Q9H209 315 aa7.53□□□□□ -1.2
UBR1-204ENST00000563239 C1orf21Q9H246 121 aa7.53□□□□□ -1.2
UBR1-204ENST00000563239 FKRPQ9H9S5 495 aa7.53□□□□□ -1.2
UBR1-204ENST00000563239 PARPBPQ9NWS1 579 aa7.53□□□□□ -1.2
UBR1-204ENST00000563239 NDRG3Q9UGV2 375 aa7.53□□□□□ -1.2
UBR1-204ENST00000563239 MAGEL2Q9UJ55 1249 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms