RNA–Protein interactions for RNA: ENST00000563149.1

USB1-207, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,751 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-207ENST00000563149 TCF7L1Q9HCS4 588 aa11.96□□□□□ -0.49
USB1-207ENST00000563149 HIF3AQ9Y2N7 669 aa11.96□□□□□ -0.49
USB1-207ENST00000563149 OR5K3A6NET4 321 aa11.95□□□□□ -0.5
USB1-207ENST00000563149 SNRPGP15A8MWD9 76 aa11.95□□□□□ -0.5
USB1-207ENST00000563149 CLDN4O14493 209 aa11.95□□□□□ -0.5
USB1-207ENST00000563149 GMDSO60547 372 aa11.95□□□□□ -0.5
USB1-207ENST00000563149 KHDRBS3O75525 346 aaKnown RBP11.95□□□□□ -0.5
USB1-207ENST00000563149 TXNDC12O95881 172 aa11.95□□□□□ -0.5
USB1-207ENST00000563149 EGFP01133 1207 aa11.95□□□□□ -0.5
USB1-207ENST00000563149 CD14P08571 375 aa11.95□□□□□ -0.5
USB1-207ENST00000563149 IFNGR1P15260 489 aa11.95□□□□□ -0.5
USB1-207ENST00000563149 GALNSP34059 522 aa11.95□□□□□ -0.5
USB1-207ENST00000563149 PTH2RP49190 550 aa11.95□□□□□ -0.5
USB1-207ENST00000563149 ZNF81P51508 661 aa11.95□□□□□ -0.5
USB1-207ENST00000563149 ART1P52961 327 aa11.95□□□□□ -0.5
USB1-207ENST00000563149 BLVRAP53004 296 aa11.95□□□□□ -0.5
USB1-207ENST00000563149 ERVK-25P63136 954 aa11.95□□□□□ -0.5
USB1-207ENST00000563149 BIKQ13323 160 aa11.95□□□□□ -0.5
USB1-207ENST00000563149 ALKBH1Q13686 389 aaKnown RBP11.95□□□□□ -0.5
USB1-207ENST00000563149 EMC4Q5J8M3 183 aa11.95□□□□□ -0.5
USB1-207ENST00000563149 TOR2AQ5JU69 321 aa11.95□□□□□ -0.5
USB1-207ENST00000563149 SFRP4Q6FHJ7 346 aaPredicted RBP11.95□□□□□ -0.5
USB1-207ENST00000563149 WBP2NLQ6ICG8 309 aa11.95□□□□□ -0.5
USB1-207ENST00000563149 PWWP2BQ6NUJ5 590 aa11.95□□□□□ -0.5
USB1-207ENST00000563149 ARMC6Q6NXE6 501 aa11.95□□□□□ -0.5
USB1-207ENST00000563149 LEG1Q6P5S2 330 aa11.95□□□□□ -0.5
USB1-207ENST00000563149 KIAA1324Q6UXG2 1013 aaKnown RBP11.95□□□□□ -0.5
USB1-207ENST00000563149 LRRN1Q6UXK5 716 aa11.95□□□□□ -0.5
USB1-207ENST00000563149 GLDNQ6ZMI3 551 aaPredicted RBP11.95□□□□□ -0.5
USB1-207ENST00000563149 IDO2Q6ZQW0 420 aa11.95□□□□□ -0.5
USB1-207ENST00000563149 DNM1P46Q6ZS02 220 aa11.95□□□□□ -0.5
USB1-207ENST00000563149 NUP54Q7Z3B4 507 aa11.95□□□□□ -0.5
USB1-207ENST00000563149 JAZF1Q86VZ6 243 aa11.95□□□□□ -0.5
USB1-207ENST00000563149 IZUMO1Q8IYV9 350 aa11.95□□□□□ -0.5
USB1-207ENST00000563149 EXD3Q8N9H8 876 aa11.95□□□□□ -0.5
USB1-207ENST00000563149 BEST4Q8NFU0 473 aa11.95□□□□□ -0.5
USB1-207ENST00000563149 SYNPRQ8TBG9 265 aa11.95□□□□□ -0.5
USB1-207ENST00000563149 THRSPQ92748 146 aa11.95□□□□□ -0.5
USB1-207ENST00000563149 MIB2Q96AX9 1013 aa11.95□□□□□ -0.5
USB1-207ENST00000563149 MS4A3Q96HJ5 214 aa11.95□□□□□ -0.5
USB1-207ENST00000563149 DGAT2Q96PD7 388 aa11.95□□□□□ -0.5
USB1-207ENST00000563149 RPP25Q9BUL9 199 aaKnown RBP11.95□□□□□ -0.5
USB1-207ENST00000563149 DPCDQ9BVM2 203 aaPredicted RBP11.95□□□□□ -0.5
USB1-207ENST00000563149 LIN7BQ9HAP6 207 aa11.95□□□□□ -0.5
USB1-207ENST00000563149 PRTFDC1Q9NRG1 225 aa11.95□□□□□ -0.5
USB1-207ENST00000563149 TAS2R10Q9NYW0 307 aa11.95□□□□□ -0.5
USB1-207ENST00000563149 TAS2R5Q9NYW4 299 aa11.95□□□□□ -0.5
USB1-207ENST00000563149 NUP50Q9UKX7 468 aa11.95□□□□□ -0.5
USB1-207ENST00000563149 MAB21L2Q9Y586 359 aa11.95□□□□□ -0.5
USB1-207ENST00000563149 TRBV5-5A0A0J9YX44 114 aa11.95□□□□□ -0.5
USB1-207ENST00000563149 ACOD1A6NK06 481 aa11.95□□□□□ -0.5
USB1-207ENST00000563149 GNB5O14775 395 aa11.95□□□□□ -0.5
USB1-207ENST00000563149 SRPX2O60687 465 aaPredicted RBP11.95□□□□□ -0.5
USB1-207ENST00000563149 ZFPL1O95159 310 aa11.95□□□□□ -0.5
USB1-207ENST00000563149 PDGFAP04085 211 aa11.95□□□□□ -0.5
USB1-207ENST00000563149 ADRB1P08588 477 aa11.95□□□□□ -0.5
USB1-207ENST00000563149 GIPP09681 153 aaPredicted RBP11.95□□□□□ -0.5
USB1-207ENST00000563149 CT45A8P0DMV1 189 aa11.95□□□□□ -0.5
USB1-207ENST00000563149 CT45A9P0DMV2 189 aa11.95□□□□□ -0.5
USB1-207ENST00000563149 GPR3P46089 330 aa11.95□□□□□ -0.5
USB1-207ENST00000563149 RABIFP47224 123 aa11.95□□□□□ -0.5
USB1-207ENST00000563149 NANOS3P60323 173 aaKnown RBP11.95□□□□□ -0.5
USB1-207ENST00000563149 RAB14P61106 215 aa11.95□□□□□ -0.5
USB1-207ENST00000563149 MRPS21P82921 87 aaKnown RBP11.95□□□□□ -0.5
USB1-207ENST00000563149 PUDPQ08623 228 aa11.95□□□□□ -0.5
USB1-207ENST00000563149 FUT7Q11130 342 aa11.95□□□□□ -0.5
USB1-207ENST00000563149 EXOSC2Q13868 293 aaKnown RBP11.95□□□□□ -0.5
USB1-207ENST00000563149 PRTGQ2VWP7 1150 aa11.95□□□□□ -0.5
USB1-207ENST00000563149 CT45A2Q5DJT8 189 aa11.95□□□□□ -0.5
USB1-207ENST00000563149 COL13A1Q5TAT6 717 aaPredicted RBP11.95□□□□□ -0.5
USB1-207ENST00000563149 STAC2Q6ZMT1 411 aa11.95□□□□□ -0.5
USB1-207ENST00000563149 Q6ZSR6 202 aa11.95□□□□□ -0.5
USB1-207ENST00000563149 LSRQ86X29 649 aaPredicted RBP11.95□□□□□ -0.5
USB1-207ENST00000563149 ZNF433Q8N7K0 673 aaPredicted RBP11.95□□□□□ -0.5
USB1-207ENST00000563149 BCORP1Q8N888 145 aa11.95□□□□□ -0.5
USB1-207ENST00000563149 LRRC75AQ8NAA5 344 aa11.95□□□□□ -0.5
USB1-207ENST00000563149 OR2T35Q8NGX2 323 aa11.95□□□□□ -0.5
USB1-207ENST00000563149 OR5AK2Q8NH90 309 aa11.95□□□□□ -0.5
USB1-207ENST00000563149 C1orf216Q8TAB5 229 aa11.95□□□□□ -0.5
USB1-207ENST00000563149 PATE1Q8WXA2 126 aa11.95□□□□□ -0.5
USB1-207ENST00000563149 RGP1Q92546 391 aaPredicted RBP11.95□□□□□ -0.5
USB1-207ENST00000563149 RNF166Q96A37 237 aaPredicted RBP11.95□□□□□ -0.5
USB1-207ENST00000563149 RASD2Q96D21 266 aa11.95□□□□□ -0.5
USB1-207ENST00000563149 MAP6Q96JE9 813 aa11.95□□□□□ -0.5
USB1-207ENST00000563149 SPACA7Q96KW9 195 aa11.95□□□□□ -0.5
USB1-207ENST00000563149 MRGPRX1Q96LB2 322 aa11.95□□□□□ -0.5
USB1-207ENST00000563149 ADAD1Q96M93 576 aaKnown RBP11.95□□□□□ -0.5
USB1-207ENST00000563149 PELOQ9BRX2 385 aaKnown RBP11.95□□□□□ -0.5
USB1-207ENST00000563149 IGFLR1Q9H665 355 aa11.95□□□□□ -0.5
USB1-207ENST00000563149 STARD5Q9NSY2 213 aa11.95□□□□□ -0.5
USB1-207ENST00000563149 NKIRAS2Q9NYR9 191 aa11.95□□□□□ -0.5
USB1-207ENST00000563149 LRIT1Q9P2V4 623 aa11.95□□□□□ -0.5
USB1-207ENST00000563149 PRODH2Q9UF12 536 aa11.95□□□□□ -0.5
USB1-207ENST00000563149 OR5V1Q9UGF6 321 aa11.95□□□□□ -0.5
USB1-207ENST00000563149 POMT2Q9UKY4 750 aa11.95□□□□□ -0.5
USB1-207ENST00000563149 TMA7Q9Y2S6 64 aaKnown RBP11.95□□□□□ -0.5
USB1-207ENST00000563149 FKBP7Q9Y680 259 aa11.95□□□□□ -0.5
USB1-207ENST00000563149 FANCMQ8IYD8 2048 aa11.94□□□□□ -0.5
USB1-207ENST00000563149 DOCK8Q8NF50 2099 aa11.94□□□□□ -0.5
USB1-207ENST00000563149 LRP4O75096 1905 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms