RNA–Protein interactions for RNA: ENST00000562626.1

CLK3-208, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 812 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-208ENST00000562626 NQO1P15559 274 aaKnown RBP8.68□□□□□ -1.02
CLK3-208ENST00000562626 CCKARP32238 428 aa8.68□□□□□ -1.02
CLK3-208ENST00000562626 OMPP47874 163 aa8.68□□□□□ -1.02
CLK3-208ENST00000562626 SMSP52788 366 aa8.68□□□□□ -1.02
CLK3-208ENST00000562626 CTBP2P56545 445 aa8.68□□□□□ -1.02
CLK3-208ENST00000562626 FXYD6P3P58550 94 aa8.68□□□□□ -1.02
CLK3-208ENST00000562626 DGCR6Q14129 220 aa8.68□□□□□ -1.02
CLK3-208ENST00000562626 KPNB1Q14974 876 aaKnown RBP8.68□□□□□ -1.02
CLK3-208ENST00000562626 RNPS1Q15287 305 aaKnown RBP8.68□□□□□ -1.02
CLK3-208ENST00000562626 ZSCAN26Q16670 478 aa8.68□□□□□ -1.02
CLK3-208ENST00000562626 FAM98BQ52LJ0 330 aaKnown RBP8.68□□□□□ -1.02
CLK3-208ENST00000562626 C1orf146Q5VVC0 180 aa8.68□□□□□ -1.02
CLK3-208ENST00000562626 OR2A2Q6IF42 318 aa8.68□□□□□ -1.02
CLK3-208ENST00000562626 MTFR2Q6P444 385 aa8.68□□□□□ -1.02
CLK3-208ENST00000562626 C5orf46Q6UWT4 87 aa8.68□□□□□ -1.02
CLK3-208ENST00000562626 TFAP2EQ6VUC0 442 aa8.68□□□□□ -1.02
CLK3-208ENST00000562626 ZNF730Q6ZMV8 503 aa8.68□□□□□ -1.02
CLK3-208ENST00000562626 MBOAT2Q6ZWT7 520 aa8.68□□□□□ -1.02
CLK3-208ENST00000562626 YTHDF3Q7Z739 585 aaKnown RBP8.68□□□□□ -1.02
CLK3-208ENST00000562626 ZER1Q7Z7L7 766 aa8.68□□□□□ -1.02
CLK3-208ENST00000562626 LUZP2Q86TE4 346 aa8.68□□□□□ -1.02
CLK3-208ENST00000562626 GPAT4Q86UL3 456 aa8.68□□□□□ -1.02
CLK3-208ENST00000562626 CYP4Z1Q86W10 505 aa8.68□□□□□ -1.02
CLK3-208ENST00000562626 HS3ST5Q8IZT8 346 aa8.68□□□□□ -1.02
CLK3-208ENST00000562626 PAPD5Q8NDF8 572 aaKnown RBP8.68□□□□□ -1.02
CLK3-208ENST00000562626 OR4K5Q8NGD3 323 aa8.68□□□□□ -1.02
CLK3-208ENST00000562626 OR9K2Q8NGE7 335 aa8.68□□□□□ -1.02
CLK3-208ENST00000562626 OR9Q2Q8NGE9 314 aa8.68□□□□□ -1.02
CLK3-208ENST00000562626 OR13C2Q8NGS9 318 aa8.68□□□□□ -1.02
CLK3-208ENST00000562626 OR6S1Q8NH40 331 aa8.68□□□□□ -1.02
CLK3-208ENST00000562626 SGTBQ96EQ0 304 aa8.68□□□□□ -1.02
CLK3-208ENST00000562626 FAM46AQ96IP4 442 aaKnown RBP8.68□□□□□ -1.02
CLK3-208ENST00000562626 TXNDC15Q96J42 360 aa8.68□□□□□ -1.02
CLK3-208ENST00000562626 ZFP3Q96NJ6 502 aa8.68□□□□□ -1.02
CLK3-208ENST00000562626 ALPK1Q96QP1 1244 aa8.68□□□□□ -1.02
CLK3-208ENST00000562626 SFXN3Q9BWM7 321 aa8.68□□□□□ -1.02
CLK3-208ENST00000562626 SLC19A3Q9BZV2 496 aa8.68□□□□□ -1.02
CLK3-208ENST00000562626 ENKD1Q9H0I2 346 aa8.68□□□□□ -1.02
CLK3-208ENST00000562626 MMADHCQ9H3L0 296 aaPredicted RBP8.68□□□□□ -1.02
CLK3-208ENST00000562626 DENND2DQ9H6A0 471 aaPredicted RBP8.68□□□□□ -1.02
CLK3-208ENST00000562626 NTN4Q9HB63 628 aa8.68□□□□□ -1.02
CLK3-208ENST00000562626 CCM2LQ9NUG4 571 aaPredicted RBP8.68□□□□□ -1.02
CLK3-208ENST00000562626 MRPL39Q9NYK5 338 aaKnown RBP8.68□□□□□ -1.02
CLK3-208ENST00000562626 MED31Q9Y3C7 131 aa8.68□□□□□ -1.02
CLK3-208ENST00000562626 U3KQV3 271 aa8.68□□□□□ -1.02
CLK3-208ENST00000562626 TRAV27A0A087WT01 109 aa8.67□□□□□ -1.02
CLK3-208ENST00000562626 ERICH4A6NGS2 130 aa8.67□□□□□ -1.02
CLK3-208ENST00000562626 ZNF724A8MTY0 619 aa8.67□□□□□ -1.02
CLK3-208ENST00000562626 EEF1E1-BLOC1S5C9J1V9 151 aa8.67□□□□□ -1.02
CLK3-208ENST00000562626 C11orf98E9PRG8 122 aa8.67□□□□□ -1.02
CLK3-208ENST00000562626 H3BNX3 289 aa8.67□□□□□ -1.02
CLK3-208ENST00000562626 EEF1E1O43324 174 aaKnown RBP8.67□□□□□ -1.02
CLK3-208ENST00000562626 KLF4O43474 513 aa8.67□□□□□ -1.02
CLK3-208ENST00000562626 OR2T1O43869 369 aa8.67□□□□□ -1.02
CLK3-208ENST00000562626 EIF1BO60739 113 aaKnown RBP8.67□□□□□ -1.02
CLK3-208ENST00000562626 SERPINI2O75830 405 aa8.67□□□□□ -1.02
CLK3-208ENST00000562626 SMNDC1O75940 238 aaKnown RBP eCLIP8.67□□□□□ -1.02
CLK3-208ENST00000562626 IL18BPO95998 194 aa8.67□□□□□ -1.02
CLK3-208ENST00000562626 IGHV3-9P01782 118 aa8.67□□□□□ -1.02
CLK3-208ENST00000562626 CRHP06850 196 aa8.67□□□□□ -1.02
CLK3-208ENST00000562626 YES1P07947 543 aa8.67□□□□□ -1.02
CLK3-208ENST00000562626 AGAP20933 346 aa8.67□□□□□ -1.02
CLK3-208ENST00000562626 UQCRC1P31930 480 aa8.67□□□□□ -1.02
CLK3-208ENST00000562626 OPRM1P35372 400 aa8.67□□□□□ -1.02
CLK3-208ENST00000562626 AQP2P41181 271 aa8.67□□□□□ -1.02
CLK3-208ENST00000562626 SELENOPP49908 381 aa8.67□□□□□ -1.02
CLK3-208ENST00000562626 CACNA1DQ01668 2161 aa8.67□□□□□ -1.02
CLK3-208ENST00000562626 RPL18Q07020 188 aaKnown RBP8.67□□□□□ -1.02
CLK3-208ENST00000562626 PMS2P3Q13401 168 aa8.67□□□□□ -1.02
CLK3-208ENST00000562626 ITPR3Q14573 2671 aa8.67□□□□□ -1.02
CLK3-208ENST00000562626 PDK3Q15120 406 aa8.67□□□□□ -1.02
CLK3-208ENST00000562626 TSC22D1Q15714 1073 aa8.67□□□□□ -1.02
CLK3-208ENST00000562626 PHYHD1Q5SRE7 291 aa8.67□□□□□ -1.02
CLK3-208ENST00000562626 OR2T5Q6IEZ7 315 aa8.67□□□□□ -1.02
CLK3-208ENST00000562626 ZNF770Q6IQ21 691 aaPredicted RBP8.67□□□□□ -1.02
CLK3-208ENST00000562626 HMBOX1Q6NT76 420 aa8.67□□□□□ -1.02
CLK3-208ENST00000562626 XKRXQ6PP77 449 aa8.67□□□□□ -1.02
CLK3-208ENST00000562626 C22orf34Q6ZV56 151 aa8.67□□□□□ -1.02
CLK3-208ENST00000562626 CREB3L2Q70SY1 520 aa8.67□□□□□ -1.02
CLK3-208ENST00000562626 H1FNTQ75WM6 255 aaPredicted RBP8.67□□□□□ -1.02
CLK3-208ENST00000562626 LINGO2Q7L985 606 aa8.67□□□□□ -1.02
CLK3-208ENST00000562626 RAI1Q7Z5J4 1906 aaPredicted RBP8.67□□□□□ -1.02
CLK3-208ENST00000562626 MCEMP1Q8IX19 187 aa8.67□□□□□ -1.02
CLK3-208ENST00000562626 SLC43A2Q8N370 569 aa8.67□□□□□ -1.02
CLK3-208ENST00000562626 LRRC75AQ8NAA5 344 aa8.67□□□□□ -1.02
CLK3-208ENST00000562626 OR6K3Q8NGY3 331 aa8.67□□□□□ -1.02
CLK3-208ENST00000562626 OR2T29Q8NH02 315 aa8.67□□□□□ -1.02
CLK3-208ENST00000562626 OR5J2Q8NH18 312 aa8.67□□□□□ -1.02
CLK3-208ENST00000562626 PIGXQ8TBF5 258 aa8.67□□□□□ -1.02
CLK3-208ENST00000562626 CA5BP1Q8WTZ4 195 aa8.67□□□□□ -1.02
CLK3-208ENST00000562626 ASB5Q8WWX0 329 aa8.67□□□□□ -1.02
CLK3-208ENST00000562626 BPIFA2Q96DR5 249 aa8.67□□□□□ -1.02
CLK3-208ENST00000562626 ZHX1-C8orf76Q96EF9 292 aa8.67□□□□□ -1.02
CLK3-208ENST00000562626 HS6ST2Q96MM7 605 aa8.67□□□□□ -1.02
CLK3-208ENST00000562626 EPYCQ99645 322 aa8.67□□□□□ -1.02
CLK3-208ENST00000562626 NAA11Q9BSU3 229 aaPredicted RBP8.67□□□□□ -1.02
CLK3-208ENST00000562626 TRIM15Q9C019 465 aa8.67□□□□□ -1.02
CLK3-208ENST00000562626 ANKRD19PQ9H560 264 aa8.67□□□□□ -1.02
CLK3-208ENST00000562626 FKRPQ9H9S5 495 aa8.67□□□□□ -1.02
CLK3-208ENST00000562626 NANSQ9NR45 359 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms